Conserved Protein Domain Family
Proteasom_PSMB

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pfam10508: Proteasom_PSMB 
Proteasome non-ATPase 26S subunit
The 26S proteasome, a eukaryotic ATP-dependent, dumb-bell shaped, protease complex with a molecular mass of approx 20kDa consists of a central 20S proteasome,functioning as a catalytic machine, and two large V-shaped terminal modules, having possible regulatory roles,composed of multiple subunits of 25- 110 kDa attached to the central portion in opposite orientations. It is responsible for degradation of abnormal intracellular proteins, including oxidatively damaged proteins, and may play a role as a component of a cellular anti-oxidative system. Expression of catalytic core subunits including PSMB5 and peptidase activities of the proteasome were elevated following incubation with 3-methylcholanthrene. The 20S proteasome comprises a cylindrical stack of four rings, two outer rings formed by seven alpha-subunits (alpha1-alpha7) and two inner rings of seven beta-subunits (beta1-beta7). Two outer rings of alpha subunits maintain structure, while the central beta rings contain the proteolytic active core subunits beta1 (PSMB6), beta2 (PSMB7), and beta5 (PSMB5). Expression of PSMB5 can be altered by chemical reactants, such as 3-methylcholanthrene.
Statistics
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PSSM-Id: 463124
Aligned: 6 rows
Threshold Bit Score: 574.044
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EDO34558       2 AAEKCKELVENISNAsgDEIVAFLRDLSVLISSSPnIRDLASLIPS-----ERLFNCLR--TT----NTDQITYCKNILK 70 
Q16401         1 MAAQALALLREVARL--EAPLEELRALHSVLQAVP-LNELRQQAAElr--lGPLFSLLN--EN----HREKTTLCVSILE 69  human
Q9VYG1         4 EDNWWVTKLKALESK--PQRLDALTAMNSAIAKEA---ALPRQIIErllttDQLYDCANpaADshvpKDQAVDVTLELLC 78  fruit fly
Q20058        11 IEEWRNDYIAERSSKkgWEILEKLAKMQIEAAQQMeTEDDVAAA---------DFDDFS--TS-------------KLVK 66  Caenorhabditis ...
XP_002642096  11 IEGWRNDYVSNRNSKkgWEILENLVKMQTEGNQQMeTDEMSENC--------AAFDDFS--TN-------------QLIK 67 
XP_003965288   1 MAATIEGLLGEISGV--EHPTEELQLLKTALLSIP-VNALRDAVSGqr--fNVIFALLN--SD----CREQVELCVDILE 69  torafugu
EDO34558      71 NILKFEKPDAPATKYHDAVIEGLNHPTEDVRELCLIE----LERCSGTVNGVLALMDKEDLLSYIARGMADEHLKNAQIA 146
Q16401        70 RLLQAMEPVHVARNLRVDLQRGLIHPDDSVKILTLSQ----IGRIVENSDAVTEILNNAELLKQIVYCIGGENLSVAKAA 145 human
Q9VYG1        79 HCLDQLAMDTADEQLSSLLRRGLTHSNPALRAQVLASlfkkLLR--QLTVGQVLTLPNNELIFLILDELKQPDTQSTSLA 156 fruit fly
Q20058        67 LIIGDISTKDLLVDHQIILLEFIPSAHPNILRH--------VVRTVREKEGAISLLKSSSVAIGVAFARRVTDAEAGEEV 138 Caenorhabditis ...
XP_002642096  68 LIIGDFTVKDLLVDHQVVLLEFIPSAHPNILRH--------VARIIREKEGALPFLKTESIAVGIAFARRITDSDAGEEI 139
XP_003965288  70 RILIALSPVCLVQKYRAELQAGLTHPNDTVKILALTQ----IGRILEHPDAATEVLNNHDVLQAVIQCIREEKIAVAKQA 145 torafugu
EDO34558     147 SNVFTNLAKHEAGLKVLfdshlQSEFNALLKT-KDTVRMRVYDMYITVQAHSPKAFDVCKEsgIFEKLISELDG-RDVLV 224
Q16401       146 IKSLSRISLTQAGLEALfesnlLDDLKSVMKT-NDIVRYRVYELIIEISSVSPESLNYCTTsgLVTQLLRELTG-EDVLV 223 human
Q9VYG1       157 INILSIVLPQRISNADV-----QAKLVQLLKQ-NEIVRCRAYELAVVLAKKSATLLSDVTF--ILDAALSELDN-DDVLL 227 fruit fly
Q20058       139 GRLMAHLVDHDLINEEL-----KSQLSVANGReSSSIRSRIYSIATERARISSNTSCIHW---LYDKILKSVLDtQDVLA 210 Caenorhabditis ...
XP_002642096 140 GRLLAHLVDNEKICDEL-----KFILKNNTGRnNAMNRASIFSIATERAGISADASCIRW---LYEEILKVVLDkEDMLA 211
XP_003965288 146 IQCLSKLSHSKPGLDKLfhgdlLAVLKDVMAT-SDIVRYRIYELVVEISSVSPISLGYCANssFISQLLGELTG-DDVLV 223 torafugu
EDO34558     225 QMNCLELLTKLASiSPSGLEYLDQKGVVTKLNNLLLEVETDP-LITLIIPGIIKFFGTLATA-HPLETTQQYPQFLEQTY 302
Q16401       224 RATCIEMVTSLAY-THHGRQYLAQEGVIDQISNIIVGADSDP-FSSFYLPGFVKFFGNLAVMdSPQQICERYPIFVEKVF 301 human
Q9VYG1       228 QASVMELLVPLAE-QNHGLSYMERRRVLDIISYRVQRVEEHP-LDALLVPSIMKFFGKISVY-QPLKIIGGYPHMLACLF 304 fruit fly
Q20058       211 QLDALDTFVDIALsGKQNAEALYELGIVKKIYELMEWSKESPdGGEMYLYGT-RFMCYMAR--SYPQVLKYFPDLARRLM 287 Caenorhabditis ...
XP_002642096 212 QLDAINIFGDIALsGKQNAEKMIEWNIVEKISELMERSRQNPdHGEMHLYGT-RFFCYLAR--SCPQVLKTFPDFVNRLM 288
XP_003965288 224 RATAIEMVTTLAQ-SQHGRQYLAQQGIMDKISNMIRGAETDS-FSSLYIPGLVKFFGNLAIMdSPQQVCETYPAFQNKVF 301 torafugu
EDO34558     303 ---SMISCGDPTLMPIAMETIGVIAHSEDGLRAV---FNNQGRNKHIMKTIFGHATSSQVDLRKRALEALASIFYSEQLT 376
Q16401       302 ---EMIESQDPTMIGVAVDTVGILGSNVEGKQVL---QKTGTRFERLLMRIGHQSKNAPVELKIRCLDAISSLLYLPPEQ 375 human
Q9VYG1       305 ---MQLQSEDESILPTAMDTLANLATTPQGKILLn--MHFSGAMEKSFKKYGSHTKKLSAHIKKRLLNSLDVIYDFKTPP 379 fruit fly
Q20058       288 leiRMFDQLSVVSRLGAFDHFASMCFSVEAKETLedmFKDSKDLENTLGAAGAACTMGTMELKCRTLQAVTLLFQNTTE- 366 Caenorhabditis ...
XP_002642096 289 feiRIFNDLGITDRLAAFDHFGCLCYSVEAKEMLedmFKNTNTLDSTLAAAGAAFAMGSIEMKRCTIQAITLIFENATD- 367
XP_003965288 302 ---EMALDPDPVMNGVALDTLGLLGSTIEGKQVL---QKTGEQFRTVLRRMSQLASSGATELRVRSLDAISQLLTLQPEQ 375 torafugu
EDO34558     377 PSEELcEFAKVLYKNMAAAPLE-AIFTVAKQPFEELRCSALCLLRSLARYQWALQDMINCPGFLEYLLDRRTEFEKSGKE 455
Q16401       376 QTDDLlRMTESWFSSLSRDPLE-LFRGISSQPFPELHCAALKVFTAIANQPWAQKLMFNSPGFVEYVVDRSVEHDKASKD 454 human
Q9VYG1       380 ATEII-NIGKNWYECFAGGAHAnIIMDLINTPFPDLQMAALSFLKTICKYNWGIVALKNTGGAVEFLLSRQKDLHRDIKY 458 fruit fly
Q20058       367 ------KIAETWYERLGGKALThVAVGNVKKPFPEMKNCIYDFWQQLFTYPSVVHQFITFQGFIDWALDDKSEDNPEYEI 440 Caenorhabditis ...
XP_002642096 368 ------AMASSWYGLMGDKALTqVALDNVKKPFPELKNCIYDFWQQVFKYPTLVQKFIAFPGFINWSLDEKSENAPEYEM 441
XP_003965288 376 QTEDLlALTESWFHLLSKQPMD-MIRNISTQPFPELHCGALRIFTAIATQPWGQRLMVSTPSFMEFVLDRSTGQTKEAKD 454 torafugu
EDO34558     456 HKYDLIKELVHFPP----AKQIFDRPYFL-RLQEYEREGPFFARAEAAVAFE--GAD 505
Q16401       455 AKYELVKALANSKT----IAEIFGNPNYL-RLRTYLSEGPYYVKPVSTTAVE--GAE 504 human
Q9VYG1       459 MKWQIMEILS--------ASAEFSPTETI-RFTAYVNEGPYHVQADLDVATEpqGNA 506 fruit fly
Q20058       441 RKRQIIHRIIELSEntksAEVLKADPELIgRLKKYLQ---------PAVAPAprVEE 488 Caenorhabditis elegans
XP_002642096 442 RKRQVIRRVIDLSEk--eSNILNADAELIgRLKKYLQ---------PSAAPAprIEE 487
XP_003965288 455 AKFELVGSLVSSST----AVQILGSQQYI-SLKAYLREGPYYVSAVASVATE--GAE 504 torafugu
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