Conserved Protein Domain Family
DotU

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pfam09850: DotU 
Type VI secretion system protein DotU
DotU is a family of Gram-negative bacterial proteins that form part of the membrane-joining complex of the type VI secretion system. DotU binds tightly to IcmF and together they are tethered to the inner membrane at one end and the peptidoglycan layer at the other; they interact with Lip1 which then tethers the peptidoglycan layer to the outer membrane.
Statistics
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PSSM-Id: 430877
Aligned: 127 rows
Threshold Bit Score: 88.8942
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012405325  53 LLRALADMPEYLD---HERVEQLRDLLEQEVRA--FQKLCEQTSIRRDHMLGTRYCLCTAIDEAAMQTA----WGKNSkv 123 Paraburkholderi...
WP_014341878  11 LFRYVTAFFIHPQe--YPDYNAFREKSITLLQQalLESERH---HETTECEDAYFAVVLWVDERVLRSRadwvKewr--- 82  Rahnella aquatilis
WP_014450443  11 LLAFVKDRLERSL----PETNTLRREILDRIEK--ARSQAKSSGISDTHFESGLFPAIVWIDESLMCAN----WPGAVdw 80  Leptospirillum ...
Q63K55         4 LVAYARQLAQSPR----GDAAEVALRLDILIER--ARDHAACAGAPAADVDDALFAVCAWIDEALLNSG----WDDADrw 73  Burkholderia ps...
WP_011768450  10 VFQVIKHLPQNISddsDITLIDLEQQFKTLLSN------VKCSGYSKEQNQHALFSVCALVDEIILDSE----WKYRNew 79  Psychromonas in...
WP_014260280  10 TFTFTRQMLENVEg-lKPTVAQVREDVDKLLAR--SEQRSNEGKFPTEDFDNARFAVCAWIDETILCSS----WESRAgw 82  Desulfocurvibac...
ACH40048      10 LIAFVVDFRAACRd-tPRSYQEVKGDIAQLLLQ--AEQACDKEAVPSDEFDLARFAVCSWVDETLLGSD----WRDKQlw 82 
WP_015404930  10 LIAYVTYFLNDTPn-rPASLEKVKTDISHLIAK--SQDSFHKSHLPQEDYDLSRFAVFAWIDEAILSSN----WEEKSkw 82  Desulfocapsa su...
Q747V0        47 VMAYLNHSLRTIGv-rQPPYGEIRCEIERFMAT--ADAAARSEGLDGEEFDLARFAVCAWIDEAILSSS----WEEKNtw 119 Geobacter sulfu...
Q39Z06        10 LVAYVTHFLRTAAv-rQPSYQEVRREIDLLLAS--GESCVRREGFSRDDFELARFAVCAWIDEAVLSSA----WSEKSlw 82  Geobacter metal...
WP_012405325 124 pvqpgqsprgkdagaaasdinnhdagvewvtrgMATIFHEDRQGGDKVYLLIGRLMSDPQEHLDLLEVIYRILSLGFEGR 203 Paraburkholderi...
WP_014341878  83 ------------------------------gdlLQKYYFDISVGGEAFFDRLDET---DKNNIQLRMVYLFCLLMGFHGK 129 Rahnella aquatilis
WP_014450443  81 s-----------------------------rnmLQKSFFRITNGGVEFYRRMPQ-ETKDPNAREILSIYLMALKLGFRGQ 130 Leptospirillum ...
Q63K55        74 t-----------------------------lrlLQKRYFDTSHAGVVFFERLGTL---DGARASVLEVYLLCLRLGFRGR 121 Burkholderia ps...
WP_011768450  80 a-----------------------------kspLQKKYFDTHKAGTQFYEILDTLNENDIKDQDVREVFLYSLVQGFSGC 130 Psychromonas in...
WP_014260280  83 l-----------------------------rehLQRRYYNTTNAGVEFFERLGKL---PVDKSQVREVYLYCLAFGYRGR 130 Desulfocurvibac...
ACH40048      83 q-----------------------------reqLQRLYYRTTEAGVELFERLQAL----GARGEVREVYYLCLALGFKGR 129
WP_015404930  83 q-----------------------------geqLQRTYYQTTDGGELFFDKLNQL---TPQQGQVREVYYLCLALGFTGR 130 Desulfocapsa su...
Q747V0       120 l-----------------------------keqLQRIHYATTDAGEEFFTRLTAL---GLNQREVREVFYLCLAFGFTGK 167 Geobacter sulfu...
Q39Z06        83 l-----------------------------reqLQRLHYNTTEAGEEFFTRLNAL---GLHQREVREVYYLCLALGFTGR 130 Geobacter metal...
WP_012405325 204 YRFEAGGHR----KHEAVRQR----IYNEIMar----------rGIVPVA-LSPHWQ-SDVKGRRasfydfpvwITVTLL 263 Paraburkholderi...
WP_014341878 130 YTSQDAq------LLQQRIEDerqcLPQAWR--------------QWPNDaLLVEQDtGGEKNKTvvkr-lrqrKGLLLA 188 Rahnella aquatilis
WP_014450443 131 Y-----GLEsnghEAARIQKH----LQSILEpdlpif-erdkifPSGYLTrEGPEGQtKVASRKTlnt----vfVWLVPS 196 Leptospirillum ...
Q63K55       122 Y-----GYDggdgPLDAIRQR----ALDALSahappcaageppfPAAYAHaGPHAAAaKARTRRRiar----agLSVGLP 188 Burkholderia ps...
WP_011768450 131 Y-----FESgeesVKQEIIQAnyalLSKDIKinlf-----sppiPIRRLNqISNANRkKQKELLT---------IFGPIG 191 Psychromonas in...
WP_014260280 131 F-----YSEeqktLLDEIKRVntrlLLGEDRpggcp---sgdlfPGAYAQdLGPGQRkSLVRLDPwl------aVFFLAP 196 Desulfocurvibac...
ACH40048     130 Y-----IGPgdeaKLEHLQQEnlklLLGTPAgipsle--qgelfPGARAPgRESAALkAPSGISPlt------aMLVAAP 196
WP_015404930 131 Y-----CNPgdefLLEQLKNSnlklIGGTTDlrsfd---qktlfPDAYLQeGATPEKfNDSSRFPi-------gVVLGAT 195 Desulfocapsa su...
Q747V0       168 Y-----CKPgdeyHLEQLKTAqlklLMGSsvglpsl--ertelfPEAWPSgPAPATVrPGRGQGSraf----lvAVAAVP 236 Geobacter sulfu...
Q39Z06       131 F-----CKPgdeyQLEQVKTAqlklLVGSsvglpsl--ertelfPEAYPAgAPAMAPaRRRVGFSpl-----aaVCLAGP 198 Geobacter metal...
WP_012405325 264 SVILL-GCFG-WFKYE 277 Paraburkholderia phymatum
WP_014341878 189 LPVIIyLVILstglgi 204 Rahnella aquatilis
WP_014450443 197 LMVLVlFVLYdriihq 212 Leptospirillum ferrooxidans
Q63K55       189 LAVLL-SLYL-IYHVV 202 Burkholderia pseudomallei
WP_011768450 192 VLLLSyFLLRsnilds 207 Psychromonas ingrahamii
WP_014260280 197 LGVLT-GLYM-VYHTY 210 Desulfocurvibacter africanus
ACH40048     197 IILFV-ALFL-IYRYL 210
WP_015404930 196 VPVLLyGVLFfIYRFV 211 Desulfocapsa sulfexigens
Q747V0       237 VALFL-ILLL-AYRFT 250 Geobacter sulfurreducens
Q39Z06       199 AVFFV-ILFF-VYRFT 212 Geobacter metallireducens GS-15
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