Conserved Protein Domain Family
rodA_shape

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TIGR02210: rodA_shape 
rod shape-determining protein RodA
This protein is a member of the FtsW/RodA/SpoVE family (pfam01098). It is found only in species with rod (or spiral) shapes. In many species, mutation of rodA has been shown to correlate with loss of the normal rod shape. Note that RodA homologs are found, scoring below the cutoffs for this model, in a number of both rod-shaped and coccoid bacteria, including four proteins in Bacillus anthracis, for example. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division]
Statistics
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PSSM-Id: 274033
Aligned: 77 rows
Threshold Bit Score: 261.678
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAS14762       8 HWLLVINVIALFCVGIVVQYSSAGg-------KWVp-------fAih--------qlVIFSFFFLLAIAMSFIELDFYLK 65  Wolbachia endos...
AAS81221      12 DWGLVFLVAAIVALGFVNLGSAAPd-------PALlyr-----------------qsVALGLGLLLAFLLQFLSRRRLFG 67  Thermus thermop...
P56098        12 DLLPFVFIIPLLVVSFLLIFESSAvlsl--------------------------kqgVYYAIGFILFWIVFFIPFRKLGR 65  Helicobacter py...
WP_011603094  44 DWTLQLCVIGLSVVGALLVWSATRq-------RLGeagadpqtfLkr--------hlLNLAIGLVLGAIATVVDYRVLRA 108 Frankia alni
WP_011618425  26 ePVLWGIPLAMVMVAGLLIASTQRq-------ADYa-------dWyh--------hwITAAVGVVIALVTARLPLLRLKP 83  Synechococcus s...
WP_002887899  13 DYMQPILFLPIILISFFLIFEAN-----------Pf-------lAek--------qfVYACVGLFAFMVFFFFPIRKFIW 66  Campylobacter j...
WP_003957567  35 DWPLLLCALALSGIGALLVWSATRnrtelnqgDPYy-------fLlr--------hlLNTGIGITLMIATIWLGHRTLRG 99  Streptomyces cl...
WP_011586651  14 DWIAVGFYILFVFLGWLNIYAVVYd-------PEAv-------sNifdfsinsgkqlMWIGGAFLLIVAILVIDYKFYST 79  Cytophaga hutch...
WP_010865212   1 ---MSILMLFGLATLRSATYGENEqlft--------------------------rqiVWDIAGFSLMFLVLFIKDRTIRN 51  Thermotoga mari...
WP_014546566  14 DWVFIGVTLTLMTCGVLLVYSATVn-------EEIa-------fYdthw----frqiIYFLMGIAIAVGLVFVKIDWLKR 75  Fibrobacter suc...
AAS14762      66 HAYFFYVAAVISLLVVNF-FGSHIMGATRWIRIG-Si--sL--QPSEFAKVGLILALARYFDKq---Svyk-------mm 129 Wolbachia endos...
AAS81221      68 LAYPLYGASLLLLALVLV-VGREINGARAWFVLGpl---qF--QPLELAKLGLLLALAKALEGrpia----------rvw 131 Thermus thermop...
P56098        66 WLFVFYWACVILLALVDF-MGYSKLGAQRWLVIP-FisitL--QPSEPVKIAILLLLAHLIKIn---Pppfk------gy 132 Helicobacter py...
WP_011603094 109 YAPFVYLGSLVGLVAVLL-FGSTINGAHSWIVLPaGf--qL--QPSEFAKVALVVGAAMLLGEq---Hedrqtgirrsap 180 Frankia alni
WP_011618425  84 LLIPIYAITVISLVAVRL-IGTTALGAQRWISIG-Gv--hV--QPSEFAKLSAILLLAAVLDRh---Pve---------- 144 Synechococcus s...
WP_002887899  67 IIPVAYWINIFLLLSVDI-FGVEKLGAKRWLEIP-Ft--hFtiQPSEIFKPSFILMLAYLIYQn---Pppkn------gy 133 Campylobacter j...
WP_003957567 100 AVPVLYGISIVLILLVLTpLGATINGAHAWIVVG-Ggf-sL--QPSEFVKITIILGMAMLLAArvdaGdqe-------hp 168 Streptomyces cl...
WP_011586651  80 FSYIFYVLSMLILLATIF-IGTEVNGSRSWLDLGiv---rV--QPAEFAKFTTALALARFLGNintn-----------iq 142 Cytophaga hutch...
WP_010865212  52 FSIILYVFSVVLLAALLV-KGTPIGGSKRWFRVmg---fsF--QPSDFAKLSLIVLLPYLLEKr---------------- 109 Thermotoga mari...
WP_014546566  76 AAVPSYVIALLMLVFVLI-FAGDVKGAGRWIDLK-Vi--kL--QPSEFAKIAYLITISYWLSKh---Pvsl--------y 138 Fibrobacter suc...
AAS14762     130 eFKRLLKALIIIFLPVFLVLKQPNLGTAVIM-----------------LFIGIsiiftaiikrshsv------------- 179 Wolbachia endos...
AAS81221     132 dYALPALLTLPVVG---LLLLQPDLGGALVVlfgvfvvvfvrglpwrhLLVGLfalallv-------------------- 188 Thermus thermop...
P56098       133 dWGMFLKLSFYICLPAALILKQPDLGTALIVlimgfgillivglrtrvWLPLFiallva--------------------- 191 Helicobacter py...
WP_011603094 181 gHGDVLLVLGLTVVPIALIMLQPDFGTVMVLvfttlgmlavsgaprrwVLGLIlcgvlfg-------------------- 240 Frankia alni
WP_011618425 145 rpVDLLRPLGIISIPWLLVFIQPDLGTSLVFgallltmlywsgmpiewLVLLLsplatallaglfpwglaawipltmiis 224 Synechococcus s...
WP_002887899 134 kLKQFIKLSFYIILPFLLIAKEPDLGSAMVLllvgfgvlfimgvhykiWLSIViaisvs--------------------- 192 Campylobacter j...
WP_003957567 169 dHRTVAKALGLAVLPMLIVMRMPDLGSVMVMvvivlgvlmasgapnrwILGLIgggvaga-------------------- 228 Streptomyces cl...
WP_011586651 143 rLDTMLKAAILLGIPCALILLQNETG-GMLVfsafilvmyreglpgtlLLIGVfvtllfvltlavgvkpiliglgilfgl 221 Cytophaga hutch...
WP_010865212 110 ---WFWRSFFLTVVPAVLIFLEPDLGTTLSVgliwlfavlasnvnkkpLVILLilvlvf--------------------- 165 Thermotoga mari...
WP_014546566 139 kLKSFLVPLGLFIVPFLLVLKQPDLSTALVFtavtlvgfffagltftdLFLIVspalsvlfshsqsmqipvlwgaqiclv 218 Fibrobacter suc...
AAS14762     180 -----------------------------icgtlgifavpaiwPFLRPYHKQRILSFLD--SSVDPLGIGYNAQQSQIAI 228 Wolbachia endos...
AAS81221     189 --------------------------------------ptavwpnLKPYQRERVLIVLDpyRDPLGQ--GFQVIQSTIAI 228 Thermus thermop...
P56098       192 --------------------------------------spiayHFLHDYQKKRIADFLS-------EKPNYHVMQSIIAI 226 Helicobacter py...
WP_011603094 241 -------------------------------------sailqfHLLQPYQEARLTSFVS--ENKASSGTGYNVAQAMIAI 281 Frankia alni
WP_011618425 225 ys-------------slpwkrvalalvlivqsaaalvtpwmwmHGLQDYQRDRLVLFLD--PAKDPLGGGYHLLQSTVGI 289 Synechococcus s...
WP_002887899 193 -------------------------------------spiiytHLLKPYQKQRIHDFIS-------EKPSYQVTQSMIAI 228 Campylobacter j...
WP_003957567 229 -------------------------------------vlvaalGLLDQYQINRFAAFAN--PSLDPTGAGYNTNQARIAI 269 Streptomyces cl...
WP_011586651 222 iiayflinrlrmtrkqllnrlsiillifamsvgfvfgvhkiffEILQEHQRNRIMVLFDteLDIRDVG--YHVHQSKIAI 299 Cytophaga hutch...
WP_010865212 166 -------------------------------------lpvfffFGLKDYQRARILSFLNp--EEYGESYSYNVLQSIHAI 206 Thermotoga mari...
WP_014546566 219 vfs-----------vlrrhlskkltgviiatnilagyastmvwNMLEPHQQKRVNTFLD--PMSDPLGDGYQVLQSITAI 285 Fibrobacter suc...
AAS14762     229 GSGGLLGKGFVNGSQTQLGFLPEKRTDFAFAVLSEEWGFLGSMALILLYTSLLGIIFSIAYRSK-N-YFSKSISIGIFAF 306 Wolbachia endos...
AAS81221     229 GSGGLFGKGYGQGTQAQLGFIPFRHTDFVFSVWAEEWGFVGVVGLLGLYGLLLARLFALALACP-R-LSDRLFLSGFAGM 306 Thermus thermop...
P56098       227 GSGGFLGKSKEACTQTKFKFLPIATSDFIFAYFVERFGFLGAMLLFAIYIGLSLHLFFYLFESN-SdWFLKIVALGISIL 305 Helicobacter py...
WP_011603094 282 ANGGVTGRGLLHGQQTQGQFVPEQQTDFVFSVAGEELGYLGAGGIIVLLGVVLWRALSIGFASQ-D-SFGALIATGVVCW 359 Frankia alni
WP_011618425 290 GSGGLFGMGLLQGQLTKLRFIPEQHTDFIFSALGEETGFLGTILVVVGFALLMGRLLQLAGQSR-S-DFESLVVIGVATM 367 Synechococcus s...
WP_002887899 229 GNGGLTGKSQDEATQTHFKFLPISTSDFIFAYMIERFGFIGGLTLIIFYILLIFHLLSLNYKLKdD-YFARVAINCVALF 307 Campylobacter j...
WP_003957567 270 GSGGLLGTGLFKGSQTTGQFVPEQQTDFVFTVAGEELGFVGGALILVLLGVVLWRACGIARDTT-E-LYGTIVATGIVAW 347 Streptomyces cl...
WP_011586651 300 GSGDFFGKGFLEGTQTKFDFVPEQSTDFIFCTIGEEHGWFGSTILIILYVLFMMRLVFLAERQK-D-SFSRIYGYSVASI 377 Cytophaga hutch...
WP_010865212 207 GAGGLFGAGYMKGKANLMGYVPVSYTDFIVSVIGEEFGFIGIVFLLSLFGLLFFEVSRWILNVK-DeYWEILMVSACG-L 284 Thermotoga mari...
WP_014546566 286 GSGGIGGKGFGNGSQTNLSFLPEEHTDFIFSVLGEQFGFVGCAVILVLFTLFLWRASSICKTND-D-PFVTLVTMGAATI 363 Fibrobacter suc...
AAS14762     307 FSAHFFINIGMTMGLLPVIGDPLPFLSYGGSTTAASLICIGLLLAIKADEQ 357 Wolbachia endosymbiont of Drosophila melanog...
AAS81221     307 LGFQVVVNLGVALGVMPVTGLTLPLFSYGGSSLIATLAGLGLVLLVHRDRY 357 Thermus thermophilus HB27
P56098       306 IFVYSSVNIAMTLGLAPVVGIPLPLFSYGGSSFITFMILFGILENLLAFRY 356 Helicobacter pylori 26695
WP_011603094 360 FTFQSFVNVGMCLGIMPVTGLPLPFLSYGGSSMFANMIAVGLLQNVRLRSR 410 Frankia alni
WP_011618425 368 LMFQVVVNIFMTIGLGPVTGIPLPFMSYGRSAMVVNFLALGLCLSVSRRSQ 418 Synechococcus sp. CC9311
WP_002887899 308 IFIYAAVNISMTIGFAPVVGIPLPFFSYGGSSFTIFMIFFGILQHLITFRY 358 Campylobacter jejuni
WP_003957567 348 FAFQSFENIGMTLGIMPVAGLPLPFVSYGGSSMFAVWVAIGLLQSIRVQRP 398 Streptomyces clavuligerus
WP_011586651 378 ILFHFMVNIGMTIGLFPVIGIPLPFFSYGGSSLWSFTILLFVFLKLDSHRG 428 Cytophaga hutchinsonii
WP_010865212 285 IWFHVFENVSMNLGLLPVTGVPLPFISYGGTSTLVFSILVGLILKGIALAR 335 Thermotoga maritima
WP_014546566 364 FLFHITVNIAMTIGLMPVTGLPLPFLSYGGSFALVCLFLVGLLMCLRYQGN 414 Fibrobacter succinogenes
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