Conserved Protein Domain Family
reg_rSAM_mob

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TIGR04472: reg_rSAM_mob 
mobile rSAM pair MarR family regulator
A number of human microbiome species from both the Firmicutes and the spirochete genus Treponema share a gene cassette encoding a pair of radical SAM enzymes and, in most cases, this MarR family transcriptional regulator as well. Sequence identity can exceed 96 percent, suggesting recent lateral transfer. These observations suggest the cassette confers resistance to a toxic compound such as an antibiotic.
Statistics
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PSSM-Id: 275265
Aligned: 5 rows
Threshold Bit Score: 260.588
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_002669408   4 NGGFLVTKIKQLGDRIFEKILSEKNIDAFNGAQGRILYVLWQEDGIPIGSLSIKCGLAITSLTTMLERMENQGLISRVQS 83  Treponema denti...
WP_016524558   4 NGGFLVTKIKQLGDRIFEKILGEKNIDAFNGAQGRILYVLWQKDGIPIKSLSEKCGLAITSLTTMLERMENHGLISRVQA 83  Treponema malto...
WP_009429520   2 NGGFLVTKIKQLGDRTFERILSKKGIDAFNGAQGRILYALWQEDGVSIKTVSKKCGLAITSLTTMLERMEKSGLIRREQD 81  Oribacterium sp...
WP_004853467   4 NGGFLVTKIKQLGDRIFEKILSEKNIDAFNGAQGRILYVLWQEDGISIRSLSTKCGLAITSLTTMLERMENQGLISRVQS 83  Lachnospiraceae
WP_013282512   4 NGGFLVTKIKQLGDRIFERILAEKNIDAFNGAQGRILYVLWQEDGVPIKIISEKSGLAITSLTTMLERMEKNGLISRKTD 83  Gram-positive b...
WP_002669408  84 ETDKRKILLFLTEKAHALKDEYNSVSDEMGSIYYKGFSEEEITRFEECLDRIRKNLEDWQE 144 Treponema denticola
WP_016524558  84 ETDKRKTLLYLTEKSRSLKSEYDAVSEKMSAIYYEGFSDKEVTQFEHYLERIRKNLEARQG 144 Treponema maltophilum
WP_009429520  82 QQDKRKTRLYLTEKSHSLKDDYDDVSAGMGRIYYKGFSEDEIIQFESYLERVQTNLEGWRE 142 Oribacterium sp. oral taxon 108
WP_004853467  84 ETDKRKTLLFLTEKAHALKGEYDSVSDEMGSIYYKGFSEEEITRFEECLDRIRKNLEEWQk 144 Lachnospiraceae
WP_013282512  84 EADKRKTLLFLTDKAKELKEAYDSVSNEMGNIYYRDFTDKEILQFEEYLNRIRVNLEEWSD 144 Gram-positive bacteria
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