Conserved Protein Domain Family
PRK07225

?
PRK07225: PRK07225 
DNA-directed RNA polymerase subunit B'; Validated
Statistics
?
PSSM-Id: 235972
Aligned: 48 rows
Threshold Bit Score: 1047.24
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
150399423   2 EKQANVYVNGKLIDTSKDPENLVKSLRIQRRSGKLSPNTSISF--NEESNDIHISTDGGRAVRPLVVVENGFSKLTNELL 79 
297619553   2 DNKTNVYVNGKLIDTVDNPEELVRNLRESRRNARISPYTSISF--NEESNDVHISTDGGRAVRPLVVVENGELKITQEHL 79 
15669230    6 SREVNIYVNGKLVGTTDKPEELVNFIREKRRKGELPQYTTVAY--NEESNDIHINTDAGRIVRPLIVVENGKPKLTKEHI 83 
15897172   40 LKWSKVILNGRLIGYYQDGGELANKIRERRRKGEISDEVNVGHivTDFINEVHVNCDSGRVRRPLIIVSNGNPLVTIEDI 119
20094124   20 EDRTPVYLNGRLIGYVEDPEEFVEKVRELRREGVLHPRVNAAY--HEDLNEVHVNCDRGRVVRPLLVVEDGEVKLTEEHL 97 
150401219   2 EKYANLYVNGKLIGSVESPDELIKYLRDNRRNGQISPFTSISY--NEESSDIHISTDAGRAVRPLIVVENGVSKLNEELI 79 
296109332   1 -MEVNIYLNGKLIGTTDKPEEFVKQIREARRKGLIPKYTTVAY--HEENNDIHINTDAGRIVRPLIVVENGKPKLTEEHI 77 
261403646   6 SREANIYVNGKLVGTTEKPEELVNYLRERRRQGELPQNTTVAY--NEESNDIHINTDAGRIVRPLIVVENGKPKLTQEHI 83 
256811203   3 SREVNIYVNGKLIGTTDKPEELINYIKEARRKGEISKYTTVAY--NEENNDIHINTDAGRIVRPLIVVENGKPKLTKEHI 80 
289193124   3 SREVNIYVNGKLIGTTDKPEELVNFIKEARRKGELPQYTTVAY--HEESNDIHINTDAGRIVRPLIVVENGKPKLTKEHI 80 
150399423  80 EKVNNNELTFEYLVKTGVIEFLDAEEEENARIAMYNDEI-------TFENTHVEIDPLVILGIGAGVAPYPEHNSAPRIT 152
297619553  80 ELVKEGELKFSDLVERGLVEYLDAEEEENAYIAIYEKDI-------NENTTHMEIDPISILGIGAGVAPYPEHNSAPRIT 152
15669230   84 EKLKKGEITFSDLVKEGVIEYLDAEEEENAYIALSEEEL-------TEKHTHLEIDPLTILGIGAGVAPYPEHNSAPRIT 156
15897172  120 EKLESGAITFDDLVRQGKIEYLDAEEEENAYVALEPNDL-------TPDHTHLEIWSPAILGITASIIPYPEHNQSPRNT 192
20094124   98 EKLREGEISWKDLEEEGVIEFLDAEEEENALIAQSLEEFysmpkeeRKKYTHVELDPAAIFGTCCSCIPWPESNSAPRNT 177
150401219  80 KKVEQGELNFSGLVKMGVIEYLDAEEEENAYIANYEKDL-------TKNHTHLEIDPLSILGIGAGVAPYPEHNSAPRIT 152
296109332  78 EKLKKGEITFDDLVKEGVIEYLDAEEEENAYIAVSEEEL-------NEKHTHLEINPLTILGIGAGIAPYPEHNSAPRIT 150
261403646  84 EKLKKGEITFSDLVKEGVIEYLDAEEEENAYIALSEEEL-------TEKHTHLEIDPLTILGIGAGVAPYPEHNSAPRIT 156
256811203  81 EKLRNGEITFSDLVKEGVIEYLDAEEEENAYIALSEEEL-------TEKHTHLEIDPLTILGIGAGVAPYPEHNSAPRIT 153
289193124  81 EKLKKGEITFSDLVKEGIIEYLDAEEEENAYIALSEEEL-------TEKHTHLEIDPLTILGIGAGVAPYPEHNSAPRIT 153
150399423 153 MAAAMGKQSLGIPMANIKWRMDTRGHLLHYPQVPLVRTKHQEILGFDKRPAGQNFVVAVMSYEGYNMEDAFVINKASLER 232
297619553 153 MAAAMSKQSLGVPMANIKWRMDTRGHLLHYPQVPLVRTKHQEILGFDKRPAGQNFVVAVMSYEGYNMEDAFIINKASIER 232
15669230  157 MAAAMGKQSLGIPMSNIKWRLDTRGHYLHYPQVPIVRTKHQEILGFDKRPAGQNFVVAIMSYEGYNMEDAIVFNKSAIDR 236
15897172  193 YQSAMAKQALGLYAANYQLRTDTRAHLLHYPQRPLVQTRALDIIGYTNRPAGNNAILAVMSFTGYNMEDSIIMNRSSVER 272
20094124  178 MGTNMTRQALGFYAANHPIRMESRGHLLYYPHRPLVKTRGTEAFDYDERPAGQNMIVAVLTYEGYNMEDAIIMNESAIER 257
150401219 153 MAAAMGKQSLGMPLANMKLRMDTKAHLLHYPQVPIVRTKHQEILGFDRRPAGQNFVVAVMSYEGYNMEDAFIINKASIER 232
296109332 151 MAAAMGKQSLGFPMSNIKWRMDTRGHYLHYPQVPIVKTKHQDILGFDERPAGQNFVVAIMSYEGFNMEDAIIFNKSAVDR 230
261403646 157 MAAAMGKQSLGIPMSNIKWRLDTRGHYLHYPQVPIVRTKHQEILGFDKRPAGQNFVVAIMSYEGYNMEDAIIFNKSAIDR 236
256811203 154 MAAAMGKQSLGIPMSNIKWRLDTRGHYLHYPQVPIVRTKHQEILGFDKRPAGQNFVVAIMSYEGYNMEDAIVFNKSAIDR 233
289193124 154 MAAAMGKQSLGIPMSNIKWRLDTRGHYLHYPQVPIVRTKHQEILGFDKRPAGQNFVVAIMSYEGYNMEDAIVFNKSAIDR 233
150399423 233 GLGRSTFFRSYESFEKRYPGGQLDKFEVPEKGVRGYRAEEAYRNLGDDGLIDLESEVRSGDVILGKTSPPRFLEEQEITL 312
297619553 233 GLGRSSFFRSYESFEKRYPGGQLDRFEVPEKGVRGYRAEGAYRNLGGDGLIELESEVSSGDVIIGKTSPPRFLEENEISL 312
15669230  237 GLGRSTFFRTYDACERRYPGGQMDRFEIPDKGVRGYRSEECYRYLEEDGIVAVESHVKGGDVIVGKTSPPRFLEEHEITI 316
15897172  273 GMYRSTFFRLYSTEEVKYPGGQEDKIVMPEAGVRGYKGKEYYRLLEDNGVVSPEVEVKGGDVLIGKVSPPRFLQEFKEL- 351
20094124  258 GLARSFFFKTFEDEARTYPGGMKDKFCIPEKEVRGYRSEDAYKHLGEDGLAEVGERVEGRDVIIGKTSPPRFLEEFRPEE 337
150401219 233 GLARSSFFRSYEGFEKRHPGGQVDRFEIPEQGVRGYRAEEAYRNLGDDGIVEVESEVKSGDVIIGKTSPPRFLEEQDISL 312
296109332 231 GLGRSTFFRTYEACERRYPGGQMDKIEIPSKEVRGNKPDELYKNLEEDGIVSVESFVKSGEVLVGKTSPPRFLEEYDITI 310
261403646 237 GLGRSTFFRTYDTCERRYPGGQMDRFEVPDKGVRGYRSEECYRHLEEDGIVAVESHVKGGDVIVGKTSPPRFLEEHEITI 316
256811203 234 GLGRSTFFRTYDACERRYPGGQMDRFEVPDKGVRGYRSEEAYKHLEEDGIASVEAHVKGGDVIVGKTSPPRFLEEHEITI 313
289193124 234 GLGRSTFFRTYDACERRYPGGQMDRFEIPDKGVRGYRSEEAYKYLEEDGIAAVEAHVKGGDVIVGKTSPPRFLEEHEITI 313
150399423 313 QTKSQRRDTSVTIRHGEEGVVDLVILSETKEGNRLGKVRVRDLRVPEFGDKFASRHGQKGVIGLVVPQEDLPFTEDGVIP 392
297619553 313 QQKSQRRDTSVTIRHGEEGTVDLVILSETKEGNRLSKVRVRDSRIPELGDKFASRHGQKGVIGLVVPQEDLPFTEDGVIP 392
15669230  317 QVKPQRRDSSVVVRHGEEGYIDKVILTETKEGNRLVKVKVRDLRIPELGDKFASRHGQKGVMGLTVPQEDLPFTESGIVP 396
15897172  352 SPEQAKRDTSIVTRHGEMGIVDLVLITETAEGNKLVKVRVRDLRIPTIGDKFASRHGQKGVIGMLIPQVDMPYTVKGVVP 431
20094124  338 LPAEERRESSTAIRHTDSGIVDSVIITETSDGHKLVKVRIRDERVPELGDKFSSRHGQKGVIGMIVPEEDMPFTEDGITP 417
150401219 313 RSKSQRRDTSITIRHGEGGIVDAVILSETKEGNRLAKIRVRDLRIPELGDKFASRHGQKGVLGLIVPQEDMPFTENGVVP 392
296109332 311 QIKPQRRDSSVCVRHGEEGYVDKVMITETKEGNKLVKVKVRDLRVPELGDKFASRHGQKGVIGLLVNQEDMPFTESGIVP 390
261403646 317 QVKPQRRDSSIVVRHGEEGYVDKVILTETKEGNRLVKVKVRDLRVPELGDKFASRHGQKGVIGLTVPQEDLPFTESGIVP 396
256811203 314 QVKPQRRDSSVVVRHGEEGYIDKVILTETKEGNRLVKVKVRDLRVPELGDKFASRHGQKGVIGLTVPQEDLPFTESGIVP 393
289193124 314 QVKPQRRDSSVVVRHGEEGYIDKVILTETKEGNRLVKVKVRDLRIPELGDKFASRHGQKGVIGLTVPQEDLPFTESGIVP 393
150399423 393 DLIINPHAIPSRMTIGQVLEMIGGKVGSLECRRVDGTIFSG---EGEWALRHALENYGFTHSGKETMYDGKTGRKLECEI 469
297619553 393 DLIINPHAVPSRMTIGQVLEMIGGKVGSLDCRRIDGTIFSG---EGEWSLRDALEAHGFKHNGKETVYEGKSGKKLECEV 469
15669230  397 DIIINPHAIPSRMTVGQLLEMLGGKVGALEGRRIDGTIFSG---EKEWDLRKALEALGFKHHGKEVMYDGKTGKKFEVEI 473
15897172  432 DIILNPHALPSRMTLGQIMEGIAGKYAALSGNIVDATPFYK---TPIEQLQNEILRYGYLPDATEVVYDGRTGQKIKSRI 508
20094124  418 DLILNPHALPSRETMAHILETLAGKAAALSGKRIDGSAFTSnpkEAYEEIKKMLRELGFEPTGKEVMYDGRTGQKLEAEV 497
150401219 393 DLIINPHAIPSRMTIGQVLEMIGGKVGSMNCKRIDGTIFSG---DPEWELRSSMEKCGYKHNGKEVMFDGKTGKKLECEI 469
296109332 391 DIIINPHGIPSRMTVGQLLEMIGGKVGSLEGRRIDGTIFNG---EEEMSLREALEKLGFKHHGREVMYDGKTGKKLEVEI 467
261403646 397 DIIINPHAIPSRMTVGQLLEMLGGKVGSLEGRRIDGTIFTG---ETEWDLRKALEALGFESHGKEVMYDGKTGKKFEVEI 473
256811203 394 DIIINPHAIPSRMTVGQLLEMLGGKVGALEGRRIDGTIFSG---EKEWDLRKALEALGFKNHGKEVMYDGKTGKKFEVEI 470
289193124 394 DIIINPHAIPSRMTVGQLLEMLGGKVGALEGRRIDGTIFSG---EKEWDLRKALEALGFKHHGKEVMYDGKTGKKFEVEI 470
150399423 470 FVGVAYYQKLHHLVAGKIHARSRGPIQVLTRQPTEGRAREGGLRFGEMERDVLVAHGAALLLKERLLDESDPHEDYVCAK 549
297619553 470 FVGVAYYQKLHHLVAGKIHARSRGPIQVLTRQPTEGRAREGGLRFGEMERDVLVAHGAALLLKERLLDESDPHEDYVCAK 549
15669230  474 YIGIAYYQKLHHLVAGKIHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLIGHGAAMLLKERLMDESDPYDICICSK 553
15897172  509 YFGVVYYQKLHHMVADKLHARARGPVQILTRQPTEGRAREGGLRFGEMERDCLIGFGTAMLLKDRLLDNSDRTMIYVCDQ 588
20094124  498 FIGVCLYRKLYHMVKDKYHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDDLVAWGASLFLKERLLDESDKYEAYICPN 577
150401219 470 FVGIAYYQKLHHLVAGKMHARSRGPIQVLTRQPTEGRAREGGLRFGEMERDVLIGHGTALLLKERLFDESDPYECHICSN 549
296109332 468 YIGVIYYQKLHHMVAGKIHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLIGHGAAMLLKERLLDESDPYDVYICSN 547
261403646 474 YIGVAYYQKLHHLVAGKIHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLIGHGAAMLLKERLMDESDPYDICICSK 553
256811203 471 YIGIAYYQKLHHLVAGKIHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLIGHGAAMLLKERLMDESDPYDICICSK 550
289193124 471 YIGIAYYQKLHHLVAGKIHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLIGHGAAMLLKERLMDESDPYDICICSK 550
150399423 550 CGEIAIFDYKRGMKFCPVCGESEDIQdnrkippVKIAYAFKLLLDELKSMGIDPKLKLKDRA 611
297619553 550 CGEIAIYDFKRGIKYCPICGEVEDVQdnrkipsVKIAYAFKLLLDELKSMGIDPKLKLKDRA 611
15669230  554 CGDFAILDYKRGLKYCPICGEIENLYsskkipfVRIPYAFKLLLDELKSMCILPRIKVRDKV 615
15897172  589 CGYIGWYDKNKNKYVCPIHGDKSNLFp------VTVSYAFKLLIQELMSMIISPRLVLEDKV 644
20094124  578 CGELCYVHAATGKTICPICGEVRADR-------VEMSYAFKILLDELKSFCMDAVLEVGSLS 632
150401219 550 CGEVAIYDHKRGMKRCQACGETEDVQnnrkipsVRLPYAFKLLLDELRSMGINPKLELKDRV 611
296109332 548 CGDFAIFDFRRKIKYCPVCGEVESPFvdrkmakIRIPYAFKLLVDELKSMCISPKFRVKDKV 609
261403646 554 CGDFAILDYRRGLKYCPICGEIENLYnskkipfVRIPYAFKLLLDELKSMCILPRMKVKDKV 615
256811203 551 CGDFAILDYKRNLKYCPICGEIENLYnskkipfVRLPYAFKLLLDELKSMCILPKIKVKDKV 612
289193124 551 CGDFAILDYKRGIKYCPICGEIENLYnskkipfVRIPYAFKLLLDELKSMCILPRIKVRDKV 612
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap