Conserved Protein Domain Family
AmmeMemoSam_rS

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TIGR04337: AmmeMemoSam_rS 
AmmeMemoRadiSam system radical SAM enzyme
Members of this protein family are uncharacterized radical SAM enzymes that occur in a prokaryotic three-gene system along with homologs of mammalian proteins Memo (Mediator of ErbB2-driven cell MOtility) and AMMERCR1 (Alport syndrome, Mental Retardation, Midface hypoplasia, and Elliptocytosis). Among radical SAM enzymes that have been experimentally characterized, the most closely related in sequence include activases of pyruvate formate-lyase and of benzylsuccinate synthase.
Statistics
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PSSM-Id: 275136
Aligned: 23 rows
Threshold Bit Score: 706.371
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_01128713   20 TRYWHRLEDGRIQCDVCPRACKLKHGQRGLCFVRACQDEQIVLTSYGRSSGFCIDPIEKKPLNHFLPGTPVLSFGTAGCN 99  Nitrococcus mob...
ZP_01866879   10 TQFWHLQDDGRVTCTVCPRFCTLREGKRGACFVRQAIDGEIVLTTYGRSSGFCIDPIEKKPLNHFYPGSSVLSFGTAGCN 89  Vibrio shilonii...
ZP_08943999   14 QGFSHLLADGRIQCDLCPRACRLREGQRGLCFVRGASQGRMELLTYGRSSGFCIDPIEKKPLNHFLPGTPVLSFGTAGCN 93  Thiorhodovibrio...
ZP_01167236   11 TKFWHSLDKEKVQCDLCPHFCKLKEGQRGLCYIRANFDHQIQLLSWGRSSGFCIDPIEKKPLNHFYPGQPILSFGTAGCN 90  Neptuniibacter ...
WP_012276075  20 TQYWHRLDDGRVQCDLCPRHCQLREGKRGVCFIRQNIDNQIKLTSYGRSSGFCIDPIEKKPLNHFYPGSSVLSFGTAGCN 99  Shewanella hali...
WP_013101417   7 TKYWHKLEDGRIQCDVCPRNCKLREGQRGLCFVRANLDNQIKLTTYGRSSGYCIDPIEKKPLNHFLPGSPVLSFGTAGCN 86  Legionella pneu...
WP_013346473   8 TRYWQALEDGRVRCTLCPRLCTVREGHRGVCFVRKAERGQIVMTSYGRSSGFCVDPIEKKPLNHFLPGTPVLSFGTAGCN 87  Ferrimonas bale...
WP_011864737  11 TQYWHALDDGRVCCDVCPRKCTLREGKRGACFVRMHHQGEIVLTSYGRSSGFCIDPIEKKPLNHFYPGSSVLSFGTAGCN 90  Shewanella loihica
WP_013021495  20 TKYWHELDDGRIQCDVCPRNCRLREGQRGLCFVRGRIGDQIVLASYGRSSGFCVDPVEKKPLNHFLPGTPVLSFGTAGCN 99  Stackebrandtia ...
WP_012830945  13 GRFWSPIEGDQIECELCPRACKLSEGQRAFCFVRQNQGGEMVLTTYGRSSGFCIDPIEKKPLNHFYPGSSVLSFGTAGCN 92  Haliangium ochr...
ZP_01128713  100 LACKFCQNWDISKSRELDTLADQAAPQELAAAALRTGCRSVAFTYNDPVIFLEYAIDIAQACHEHGLKAVAVSAGYMCAE 179 Nitrococcus mob...
ZP_01866879   90 LGCKFCQNWNISKSRQIDTLGSQASPEQIALTATKYQSDSIAFTYNDPVIFLEYAVDTALACREAGVNTVAVSAGYMCEK 169 Vibrio shilonii...
ZP_08943999   94 LTCDYCQNWDISKSRAADTLAATASPEQIAQAAHSHGCRSVAYTYNDPVIFLEYACDTAQECHALGVNNVAVTAGYISPG 173 Thiorhodovibrio...
ZP_01167236   91 LTCKFCQNWDMSKSRQMDTLSDNATPQQLVEAAIQHNCIGLAFTYNDPVIFMEYALDAISACHEEKLKAVAVSAGFINPA 170 Neptuniibacter ...
WP_012276075 100 LSCKFCQNWDISKSREFDTLGAKAMPEDLASAAKRMGCKSVAFTYNDPVIFHEYAIDVAKACHKLGIKAVAVTAGYICPE 179 Shewanella hali...
WP_013101417  87 LACKFCQNWDISKSRDIDTLADTAMPEDIARAAQNMNCLSVAYTYNDPVIFMEYAIDVAKECHKLGIHSVAVSAGYINPE 166 Legionella pneu...
WP_013346473  88 LTCQFCQNWDISKSREMDTLAGKATPLQLAQAAERMGCRSIAFTYNDPVIFMEYALDVAEACRQRGLESVAVTAGYINPE 167 Ferrimonas bale...
WP_011864737  91 LSCLFCQNWDMSKSRQMDTLCDSAMPDELAATARRHGCKSIAFTYNDPVVFMEYAIDAAQAAHELGLKSVAVSAGYICEA 170 Shewanella loihica
WP_013021495 100 LACRFCQNWDISKSREIDTLSGEAAPDTLAQAASKLECSSIAFTYNDPTIFLEYAVDAAQACKELGIKTIAVSAGYINAE 179 Stackebrandtia ...
WP_012830945  93 LGCKFCQNWSISKAREWERLSERALPGDIAAAAERHACKSVAFTYNDPVIFAEYAIDVAAACRERGIRTVAVTAGYLTEQ 172 Haliangium ochr...
ZP_01128713  180 PRVEFYRHMDAANIDLKAFTERFYRKLTGSSLGPVLETLQYLKHETSVWFEITTLLIPGHNDEPSELDALSRWVCEKLGP 259 Nitrococcus mob...
ZP_01866879  170 PRESFYSVMDAANIDLKAFTERFYHKVCSGQLAPVLDTLKYLKHETDVWLEITTLLIPDENDSSAEIDAMTQWVMDNLGP 249 Vibrio shilonii...
ZP_08943999  174 AREVFFADMDAANIDLKAFSEDFYRQHCSGQLGPVLETLEYLKQETTTWVEITTLLIPGVNDSDAELAALCAWISDDLGT 253 Thiorhodovibrio...
ZP_01167236  171 PREQFFSVMDACNIDLKAFSEQFYRKNCSGHLSTVLDTLLYIHHETNCWLEITTLLIPGLNDSDSELEKLCNWIYSELSA 250 Neptuniibacter ...
WP_012276075 180 PRVEFFKFMDAANVDLKGFTEDFYHNICGGHLSDVLDTLLYLHHETQVWLELTTLLIPGENDSSKELERQCRWISDNLGP 259 Shewanella hali...
WP_013101417 167 PCKELYSFMDAANIDLKSFSEDFYYKITGSHLQPVLDTLIYLKKETSVWFEITNLVIPEENDSDAEFERMSEWIMTNLGP 246 Legionella pneu...
WP_013346473 168 PRAEFFAGMDAANVDLKGFTEGFYKRVCGGHLEPVLDTLRYLRRETEVWFEITTLLIPGLNDSDSELHQMAAWIRDELGP 247 Ferrimonas bale...
WP_011864737 171 PRIEFYRYMDAANIDLKAFSESFYHKICHGQLQPVLETLLYLKHETQVWFEITTLLIPGENDSDEELNAMCQWLVENLGP 250 Shewanella loihica
WP_013021495 180 PRAEFYSHMDAANIDLKAFTEDFYQKIAFSKLGTVLDTLKYLRHETDVWLEITTLLIPGYNDSNSELAEMCAWIAEHLGD 259 Stackebrandtia ...
WP_012830945 173 ARPEFFAAMDAVNVDLKAFRESFYHTLTFSHLEPVLDSLRYLRNETDIWFEVTTLLIPGHNDDDESLHRQCEWFVRQLGP 252 Haliangium ochr...
ZP_01128713  260 EVPLHFTAFHPDFKLRDPPPTPPETLTRARHIAIANGLHYVYTGNVHDLDGGSTYCQRCGQRLIGRDWYELSTWNVDAH- 338 Nitrococcus mob...
ZP_01866879  250 EVPLHFTAFHPDFKMLDKTRTPADSLVRARNIALNNGLHYVYVGNVHDEACSSTYCPSCHNKVLSRNWHQLGDCALTSS- 328 Vibrio shilonii...
ZP_08943999  254 EVPLHFSAFHPDFKLRHLPPTPPATLTRARHIARAHGLHHVYTGNVHDRDGASTWCHACGTLLIERDWYQLGAWKLSAS- 332 Thiorhodovibrio...
ZP_01167236  251 DVPIHFTAFHPDYKMRDLPKTPLSTLSKAREIALKQGLNYPYTGNAFDPQGNSTFCPECKSLLIGRNWYEITAWNLDKK- 329 Neptuniibacter ...
WP_012276075 260 DVPLHFSAFHPDFHMMDTPATPASTLTRAREIAINQGLNFVYTGNIHDPSGGSSYCANCKKLLIARDWYELGEYHLDNS- 338 Shewanella hali...
WP_013101417 247 DVPLHFTAFHPDWKMMDKAPTPFSTLQRAREIAIKTGLHYVYTGNVHDTTGSSTYCPHCKLPVIVRDWYRILDYRVDDT- 325 Legionella pneu...
WP_013346473 248 DVPLHFSAFHPDFKMLDRPATPPATLTRARTIAMAEGLHYVYTGNVHDPKGGSTWCPGCGALVIERDWYQLGQWAVTADa 327 Ferrimonas bale...
WP_011864737 251 DVPLHFSAFHPDFKLLDRPPTPLSTLQRARRIALNHGLHYVYCGNVHDPDSDATYCASCHKRLIERDWYQLGQYALDEQ- 329 Shewanella loihica
WP_013021495 260 EVPLHFSAFHPDFKMRDVPATPPATLSRARRIAIDHGLKYVYTGNVHDTDGGTTHCGGCGKPVVVRDWYVLKEYRIDGT- 338 Stackebrandtia ...
WP_012830945 253 EVPLHFSAFHPDYRMRDVEATPPATLQRARTLAKSHGIRHVYTGNVHDLASQSSYCAACDALLIERDWYALGTYRLTPE- 331 Haliangium ochr...
ZP_01128713  339 ---GDCRFCGARLPGVFEPTPGEWGRKRLAVAL 368 Nitrococcus mobilis Nb-231
ZP_01866879  329 ---GVCHHCGHQIAGRFAKCDKPWGRKRIPVQV 358 Vibrio shilonii AK1
ZP_08943999  333 ---GTCTQCGIPCAGVFEPKPGDWGARRQPIRW 362 Thiorhodovibrio sp. 970
ZP_01167236  330 ---GQCKNCGYTAAGVYTENPGDWGRKRELINI 359 Neptuniibacter caesariensis
WP_012276075 339 ---GRCDYCGTQLPGCFDGPPEHFGRRRIPVSI 368 Shewanella halifaxensis
WP_013101417 326 ---GHCLNCHTQIAGVFKGAVGHWGPRRVMVKL 355 Legionella pneumophila
WP_013346473 328 tgaGRCAQCGEAIPGRFEAEPGRWGRRRVPVRM 360 Ferrimonas balearica
WP_011864737 330 ---GTCRYCGAPLPGRFARVREDFGARRIAVRI 359 Shewanella loihica
WP_013021495 339 ---GHCEHCGARIPGVYSGPAGTWGPKRRPVRL 368 Stackebrandtia nassauensis
WP_012830945 332 ---GSCPDCGQALAGRFDAAKGAWGAKRLPVVL 361 Haliangium ochraceum
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