2G02,2G0D


Conserved Protein Domain Family
LanC

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cd04793: LanC 
Click on image for an interactive view with Cn3D
Cyclases involved in the biosynthesis of lantibiotics
LanC is the cyclase enzyme of the lanthionine synthetase. Lanthinoine is a lantibiotic, a unique class of peptide antibiotics. They are ribosomally synthesized as precursor peptides and then post-translationally modified to contain thioether cross-links called lanthionines (Lans) or methyllanthionines (MeLans) in addition to 2,3-didehydroalanine (Dha) and (Z)-2,3-didehydrobutyrine (Dhb). These unusual amino acids are introduced by the dehydration of serine and threonine residues, followed by thioether formation via addition of cysteine thiols, catalysed by LanB and LanC or LanM. LanC, the cyclase component, is a zinc metalloprotein, whose bound metal has been proposed to activate the thiol substrate for nucleophilic addition. Also contains SpaC (the cyclase involved in the biosynthesis of subtilin), NisC, and homologs.
Statistics
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PSSM-Id: 271201
Aligned: 65 rows
Threshold Bit Score: 189.098
Created: 28-Feb-2007
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
zinc bindingactive site
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1: zinc binding site [ion binding site], 3 residue positions
Conserved feature residue pattern:C C [HC]Click to see conserved feature residue pattern help
Evidence:
  • Structure:2G0D; Lactococcus lactis Nisin cyclase binds Zn2+

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
2G02_A        32 TLSTGLPGIILMLAELknkdnsKIYQKKIDNYIEYIVSKLSTygl-ltgSLYSGAAGIALSIlhlreddekYKNLLDSLN 110 Lactococcus lac...
2G0D_A        32 TLSTGLPGIILMLAELknkdnsKIYQKKIDNYIEYIVSKLSTygl-ltgSLYSGAAGIALSIlhlreddekYKNLLDSLN 110 Lactococcus lac...
BAD74589      43 SLSHGLPALCALYGELgeqypdEGWDLLGHQYIKKIGEQMNQhgf-pslSMFTGLAGIGLAAvclskggkrYQNFISTIN 121 Geobacillus kau...
BAD66091      54 SLSHGFAGTILFFSELhkmypeEKWDHVAHNHIVYASNYLKNgvh--siSLFGGITGFAFAVfnasengtrYQNLLAKLD 131 Bacillus clausi...
BAE79040      44 SVAVSYPALCVLFSELnynfpqYNFDVCAHRYLERVNNSLLQnni-ydiSLFDGLCGVGFAAncmsdngkqYQSFIRNLN 122 Clostridium per...
YP_003565951  63 TLSHGFPGTILLFGELdrqfpdSGFDLVAHNHLVEVQKVIERqgv-nsiSMFGGITGVAYATlyishnyerYSRFLQVLN 141 Bacillus megate...
YP_003869828  56 SLSHGYPGNIHLLSQWratdpsYDWNRAIHSNMAQIQSSLAKngl-hdlSLYSGWTGIASSVrvasnhgkyYSNFLQQIH 134 Paenibacillus p...
WP_006341160  53 SLAEGYPGLLILFAELngh-nlINADDVVHQYVLRIKETIESqglnpdlSLYNGIAGICFSLhlasckrmrYQKMLKTLD 131 Parachlamydia a...
AFW17837      63 SLGSGFTGICLLMGQLdylypkNGWDIVGHQYLERIRMVVEQkgv-hdlSLYSGLAGIMLAIyslsrkgtrYQGMLDALA 141 Paenibacillus p...
YP_003845687  40 ELLFALPSINILMGQLikqydeDLFKISAHNNIVLLNGRISEycn--diSSFYGYSLIGFSTlaisnnknlYKNFLEGLN 117 Clostridium cel...
Feature 1                                                                                        
2G02_A       111 RYIEYFVREKIegfnle------nitppDYDVIEGLSGILSYLLlind--eqyDDLKILIINFLSNLTkennglisl--- 179 Lactococcus lac...
2G0D_A       111 RYIEYFVREKIegfnle------nitppDYDVIEGLSGILSYLLlind--eqyDDLKILIINFLSNLTkennglisl--- 179 Lactococcus lac...
BAD74589     122 QAIEERIGEMIeylkqk-----pypnmdDYDAISGVAGIASYCLlfp---qemKKSITLILKYIIDLSqdkqmedinvpg 193 Geobacillus kau...
BAD66091     132 EVIRRVAENEIeeekqrn---glgalptFYDVIQGYSGIGRYLLerrkdtpafNGLIEAILRQFVEMTatitweehevpg 208 Bacillus clausi...
BAE79040     123 EHILNIADRNMlkykkm------plnetIYDIMYGLTGIVNYLLnfks-esrvKNTLSNILQYLVDICtisidgvpkfa- 194 Clostridium per...
YP_003565951 142 NFILMQLEKILnepeke-----lgvhplKYDVIQGMTGIGRYLIentk-hkenHEALKKILTYFVDMAsdievngekvpg 215 Bacillus megate...
YP_003869828 135 QWMMPLTEQWLqsnteqls-lhegvpmqAFDTISGASGIGRYILmnst-dpicTPLVEPILQFLTDLThpihmhnryvpg 212 Paenibacillus p...
WP_006341160 132 EYLLRRIEKQYlepiriclsnetpvmvkLYDPIQGITGIGRYILents--qeaMDCTIKIIKVLIDLVrpikvegkkvpg 209 Parachlamydia a...
AFW17837     142 SWFEEAALQSLalhriewe--kgelrmsQYDTISGFAGVGRIAMlfln-rpgmQMVWEQTMDLFHVMCgeknlnghtvpa 218 Paenibacillus p...
YP_003845687 118 KYIVIGVNNIVkqeel--------ismpVCECINGLAGIGRYLLefke-vssvLEAIKGILIFLIKLTkkkitankyevr 188 Clostridium cel...
Feature 1                                                                                        
2G02_A       180 -----yiksenqmsQSESEMyplgclnMGLAHGLAGVGCILAYAHIKGysNEASLSALQKIIFIYEKFElerkkqf-lwk 253 Lactococcus lac...
2G0D_A       180 -----yiksenqmsQSESEMyplgclnMGLAHGLAGVGCILAYAHIKGysNEASLSALQKIIFIYEKFElerkkqf-lwk 253 Lactococcus lac...
BAD74589     194 wyippknafsdterRKWPSGff----nIGLSHGIPALLIVLCNAKKLNiyVDGQDECIQRIADFLMKFQikdengs--yw 267 Geobacillus kau...
BAD66091     209 wyvtqenqflekdkKIYPFGnf----nLGLAHGIPGPLSFLSLCLLKGieIPGQRQAITTIGNWLVRHAksnstgapvwa 284 Bacillus clausi...
BAE79040     195 ---irvnqsqmfslSNNSRMry---vnLGVAHGIPGILLILCKSYELGicVDNQLEAIKYLSEYIFNNCvknnn-----t 263 Clostridium per...
YP_003565951 216 wyvskanqllekdrIMFPEGnf----nCGLAHGIPGPLSFMALSIQKGieIPGQREAVLKITNWLMKWKqvdsg-----w 286 Bacillus megate...
YP_003869828 213 wyspqkfqfldrdkRNYPLGnf----nCGMAHGIPGPLALLSVAYSAGieVKGQYQAIETIAEWLLKYKyedeygs-ywp 287 Paenibacillus p...
WP_006341160 210 wyvsgqdplnyrvqDGLSKGnf----nLGLAHGVTGILAYLSIASIRGieVEGQKDAINIIANWLQAKSfvfnesm-iwp 284 Parachlamydia a...
AFW17837     219 whissehqfqedekLQYPQGnf----nLGISHGIAGPLCFLSLSALHGvdASPLMNDIHRLGKFIHHWRvqdvegi-iwp 293 Paenibacillus p...
YP_003845687 189 kwfieyesqseiekKNYSYGht----rIGMAHGIVGILSLLAIAKIQGveVEGQEEAIKDILSYLYKFRieekglv-ywp 263 Clostridium cel...
Feature 1                                 #                                                ##    
2G02_A       254 dglvADELKKekvir-easfiRDAWCYGGPGISLLYLYGGlALDNDYFVDKAEKILESAMQRkl---gIDSYMICHGYSG 329 Lactococcus lac...
2G0D_A       254 dglvADELKKekvir-easfiRDAWCYGGPGISLLYLYGGlALDNDYFVDKAEKILESAMQRkl---gIDSYMICHGYSG 329 Lactococcus lac...
BAD74589     268 gthvSLEEYKngsvl--nkdtRDAWCYGTPGVAYSLLIAGkTLNNQSYIDCAVSGMKLASKRly---nIFSPSFCHGLSG 342 Geobacillus kau...
BAD66091     285 hrvgVKEAIAnkyt---videREGWCYGNPGVARSLYLAGkALNELPYQEMAVKCFHGIKEKtleeldLQSATFCHGKSG 361 Bacillus clausi...
BAE79040     264 ifweSQKIIGienye--avpaRDAWCYGTPGVAYSLLIASkLLDNDEMNKLAIDAMKLSLNRlr---eVISPTFCHGLSG 338 Clostridium per...
YP_003565951 287 psrlSFQEVAtskis-hsypkRQGWCYGDPGVARSIYLAGkALGDTAAIRSAVGAYQDIIVEpkeeweLVSPTFCHGRAG 365 Bacillus megate...
YP_003869828 288 hivpFEAETGslrfd--leraREAWCYGTPGIACSLFLAGkALHNENLQKLAVKACVGAISYeiakreMDSSALCHGLTG 365 Paenibacillus p...
WP_006341160 285 fyvsFEEEVNeydep--svpsRDAWCYGTPGVARSLYLAGkALGDQGLKLLAKKAFQGIFRRsfeqweIPSPILCHGIAG 362 Parachlamydia a...
AFW17837     294 grisFGEWLDgqllsgstrnyRDSWCYGVPGIARSIWLAGqAVHNEEWLETGLSAYLDIEKRlhrkggLSSATLCHGIGG 373 Paenibacillus p...
YP_003845687 264 ykvgIEERQGakda----vnyMPSWCYGSGGIARAIYLAGkAIEDDYYIEDSISCIRKFCALdidklgFISPTFCHGYSG 339 Clostridium cel...
Feature 1                                                                                        
2G02_A       330 LIEICSLFKRLLntkkfDSYMEEFNVNSEQIleeyg-----------------desgtGFLEGISGCILVLSKFeysinf 392 Lactococcus lac...
2G0D_A       330 LIEICSLFKRLLntkkfDSYMEEFNVNSEQIleeyg-----------------desgtGFLEGISGCILVLSKFeysinf 392 Lactococcus lac...
BAD74589     343 VAYICNRFYEETni-sdFKEAACKLVDDIIKfyneefpfgfkni-eesegstkyydyvGLIDGTAGILLTILAIqnsk-k 419 Geobacillus kau...
BAD66091     362 LLQIMVRMKNDLni-ndFDKLINQLENGIKEqyrdqhplgfkdf--eigsrtneldkaGLLEGAAGVGLALLSRtgddsd 438 Bacillus clausi...
BAE79040     339 LCCLARKFHEYTnd-nyFYEMYIKLLKNILDlysdqypfgfink-evekgqitnkneiGLLIGTTGVILTILSCyrpi-k 415 Clostridium per...
YP_003565951 366 LLQMLIRMAKDEen-qiSVQSIVELVHYIEEsydpnapfgfrdi-esngekshqlnkaGLLEGVTGVLLPLLSLssve-e 442 Bacillus megate...
YP_003869828 366 LLTISWRMWRHSke-paFLPLIQQLTNCLLDrfqmdsplgyldpeprsdgsltwltkaGMLEGVAGIAAALLSVsenk-e 443 Paenibacillus p...
WP_006341160 363 LLAITQEMANEEdg-edLFEEIEKLKLLLYSayqqeaafgfkdiepcrrggqieldkiGYLEGSVGAILSLLPLsqe--h 439 Parachlamydia a...
AFW17837     374 LLHLVQRMYSDTsh-eqLGRIRDRLLEDVLDmfdanslfgfydh-slldgrlaevdeaGFLNGSAGVALVLASLigdq-n 450 Paenibacillus p...
YP_003845687 340 WLHIVNLFYKDTge-keFEPVINNLASRILTyynednplgfknleyddnlevieedhiSFVRGTVSVLLPLLGLindkkd 418 Clostridium cel...
Feature 1              
2G02_A       393 tyWRQA 398 Lactococcus lactis subsp. lactis
2G0D_A       393 tyWRQA 398 Lactococcus lactis subsp. lactis
BAD74589     420 tpWDCA 425 Geobacillus kaustophilus HTA426
BAD66091     439 lfWDKA 444 Bacillus clausii KSM-K16
BAE79040     416 tqWDSI 421 Clostridium perfringens
YP_003565951 443 pwWDGA 448 Bacillus megaterium QM B1551
YP_003869828 444 igWDYI 449 Paenibacillus polymyxa E681
WP_006341160 440 stWKLP 445 Parachlamydia acanthamoebae
AFW17837     451 pdWDAA 456 Paenibacillus polymyxa
YP_003845687 419 neWDHI 424 Clostridium cellulovorans 743B

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