Conserved Protein Domain Family
GGGWT_bact

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NF040941: GGGWT_bact 
fibrinogen-like bacterial YCDxxxxGGGW domain
Pfam model PF00147, about 220 amino acids long, describes a conserved domain found in eukaryotic proteins such as fibrinogen beta and gamma chains, fincolin, and angiopoietin. This model describes a small homology domain, about 46 amino acids long, found in the PF00147 homology region of those proteins but also as a much shorter homology domain in bacterial proteins that may lack homology to those proteins, or to each other, outside this region. The signature motif, at the C-terminus of this domain, is YCDxTTDGGGWxLV.
Statistics
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PSSM-Id: 468872
Aligned: 91 rows
Threshold Bit Score: -1
Created: 24-Apr-2023
Updated: 4-May-2023
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_026960217  94 NCQAILAAGQSAGDGFYWIDPD-GEDygvDPFEVYCDMTTQGGGWTLF 140 Aliagarivorans taiwanensis
WP_026287136  25 SCLDILTATPGATDGVYTVQGE----------SVYCDMTTDGGGWTLV 62  Gilvimarinus chinensis
WP_120557145  40 SCQHLYAMGVRR-SGVYFLKPD---Gt--QALTTYCDMETQGGGWAMV 81  Corallococcus aberystwythensis
WP_127781408 306 SCLDLLLGGTTT-SGVYSLDPN-EDG---TLEDVYCDMDTDGGGWTLV 348 Lujinxingia sediminis
WP_127781408 626 SCLDALIDTPGLPDGTYLIDPD-GEGp-lKNLEVYCDMTSDGGAYTFL 671 Lujinxingia sediminis
WP_127781418 690 SCLDLLLDTPGLPDGEYIIDRD-GSGp-lPLTRVYCDMTSDGGGYTML 735 Lujinxingia sediminis
WP_127781419 402 SCLDLLLGGTTE-SGAYDLAPD-QHS---IRGSIYCDMTTDGGGWTLV 444 Lujinxingia sediminis
WP_132318982 174 TCQTLYTLGYRT-SGVYYLIIE-SLE---GLIPAYCDMETDQGGWTLV 216 Pseudobacteriovorax antillogorgiicola
WP_157823821  37 NCQALQNAGVAL-SGTYWIQPA---Gs--TPRTAYCDMETQGGGWTLV 78  Melittangium boletus
WP_207912295  74 SCLDVQEKIAEAPSGVYRLFYQdELGe-qQFLDAYCDMTEEGGGWTMI 120 Pseudobacteriovorax antillogorgiicola
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