1AG9,1CZL,2BMV


Conserved Protein Domain Family
flav_long

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TIGR01752: flav_long 
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flavodoxin, long chain
Flavodoxins are small redox-active proteins with a flavin mononucleotide (FMN) prosthetic group. They can act in nitrogen fixation by nitrogenase, in sulfite reduction, and light-dependent NADP+ reduction in during photosynthesis, among other roles. This model describes the long chain type, typical for nitrogen fixation but associated with pyruvate formate-lyase activation and cobalamin-dependent methionine synthase activity in E. coli. [Energy metabolism, Electron transport]
Statistics
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PSSM-Id: 273788
Aligned: 11 rows
Threshold Bit Score: 228.398
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1AG9_A         2 ITGIFFGSDTGNTENIAKMIQKQLGk-dVADVHDIAKSSKEDLEAYDILLLGIPTWYYGEAQ--------CDWDDFFPTL 72  Escherichia coli
O25776         3 KIGIFFGTDSGNAEAIAEKISKAIG---NAEVVDVAKASKEQFNSFTKVILVAPTAGAGDLQ--------TDWEDFLGTL 71  Helicobacter py...
P10340         3 KIGLFYGTQTGVTQTIAESIQQEFGgesIVDLNDIANADASDLNAYDYLIIGCPTWNVGELQ--------SDWEGIYDDL 74  Synechococcus e...
P04668         3 NIGIFFGTDTGKTRKIAKMIHKQLGe-lADAPVNINRTTLDDFMAYPVLLLGTPTLGDGQLPgleagcesESWSEFISGL 81  Klebsiella pneu...
P23243         3 ITGIFFGSDTGNTENIAKMIQKQLGk-dVADVHDIAKSSKEDLEAYDILLLGIPTWYYGEAQ--------CDWDDFFPTL 73  Escherichia coli
WP_011566211  23 KIGLFYGSSTCYTEMVAEKIRDILGe-dLVDLHNLKEVSPRLMEEYSILILGIPTWDFGELQ--------EDWEAIWPQL 93  Yersinia pestis
WP_010933399   3 KTAVVWASQTGNTKEAAELIATEIGr-pDVDLFEVSREELLRLTEYDMLIIGTSTWGAGELP--------HGWREAVSAL 73  Chlorobaculum t...
1CZL_A         2 KIGLFYGTQTGVTQTIAESIQQEFGgesIVDLNDIANADASDLNAYDYLIIGCPTWNVGELQ--------SDWEGIYDDL 73  Synechococcus e...
WP_002855629   2 SVAVIYGSAMGNTEGAANTIASKLGi---sDVFNISDIDAAKMNSYDKLICGTSTWGSGDLQ--------DDWDGF--DF 68  Campylobacter j...
2BMV_A         3 KIGIFFGTDSGNAEAIAEKISKAIG---NAEVVDVAKASKEQFNSFTKVILVAPTAGAGDLQ--------TDWEDFLGTL 71  Helicobacter py...
WP_011016609   3 TIGIFYATLTKTTVGIVDEIEFFLKk-dDFKTFNVKNG-VKEIENFENLILVTPTYQVGEAH--------AAWMNNLKKL 72  Fusobacterium n...
1AG9_A        73 EEIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRgaTIVGHWPTAGYHFEASKGLA-DDdHFVGLAIDEDRQPEL 151 Escherichia coli
O25776        72 EASDFATKTIGLVGLGDQDTYSETFAEGIFHIYEKAKAG--KVVGQTPTDGYHFEASKAVE-GG-KFVGLVIDEDNQDDL 147 Helicobacter py...
P10340        75 DSVNFQGKKVAYFGAGDQVGYSDNFQDAMGILEEKISSLgsQTVGYWPIEGYDFNESKAVR-NN-QFVGLAIDEDNQPDL 152 Synechococcus e...
P04668        82 DDASLKGKTVALFGLGDQRGYPDNFVSGMRPLFDALSARgaQMIGSWPNEGYEFSASSA-L-EGdRFVGLVLDQDNQFDQ 159 Klebsiella pneu...
P23243        74 EEIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRgaTIVGHWPTAGYHFEASKGLA-DDdHFVGLAIDEDRQPEL 152 Escherichia coli
WP_011566211  94 TQLNLKGKIVAMYGMGDQFGYSEWFLDALGMLHDHIAPLgvKFIGFWPTDGFEFTSPKPLSaDGkQFVGLALDEVNQYDL 173 Yersinia pestis
WP_010933399  74 DQLDLTGKTVAFFGLGDQLVYGDWYVDAMGILHDRFVSRgaKVVGAWPSDTYEFSSSKALR-DG-MFVGLALDADNQEHL 151 Chlorobaculum t...
1CZL_A        74 DSVNFQGKKVAYFGAGDQVGYSDNFQDAMGILEEKISSLgsQTVGYWPIEGYDFNESKAVR-NN-QFVGLAIDEDNQPDL 151 Synechococcus e...
WP_002855629  69 SGLSLGGKTVAVFGMGDSESYSDTFCGGMGKLAQNLKDAgaNLVGEVSTDGYTFEASDAVV-DG-KFVGLALDNDNQEDQ 146 Campylobacter j...
2BMV_A        72 EASDFANKTIGLVGLGDQDTYSETFAEGIFHIYEKAKAg--KVVGQTSTDGYHFEASKAV--EGgKFVGLVIDEDNQDDL 147 Helicobacter py...
WP_011016609  73 EEIDFTGKVVGLVGLGNQFAFGESFCGGIRYLYDIVVKKggKVVGFTSTDGYHYEETS-II-ENgKFIGLALDEENQPNL 150 Fusobacterium n...
1AG9_A       152 TAERVEKWVKQISEELH 168 Escherichia coli
O25776       148 TDERISKWVEQVKGSFA 164 Helicobacter pylori 26695
P10340       153 TKNRIKTWVSQLKSEFG 169 Synechococcus elongatus PCC 7942
P04668       160 TEARLASWLEEIKRTVL 176 Klebsiella pneumoniae
P23243       153 TAERVEKWVKQISEELH 169 Escherichia coli
WP_011566211 174 SEERIEQWCEQILLEME 190 Yersinia pestis
WP_010933399 152 TRERIRRWVCSIRPYLS 168 Chlorobaculum tepidum
1CZL_A       152 TKNRIKTWVSQLKSEFG 168 Synechococcus elongatus PCC 7942
WP_002855629 147 TESRIDAWVEQIKPYFA 163 Campylobacter jejuni
2BMV_A       148 TDERISKWVEQVKGSFA 164 Helicobacter pylori
WP_011016609 151 TPKRIGDWITEIKKEFK 167 Fusobacterium nucleatum
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