6LO8


Conserved Protein Domain Family
CybS

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pfam05328: CybS 
CybS, succinate dehydrogenase cytochrome B small subunit
This family consists of several eukaryotic succinate dehydrogenase [ubiquinone] cytochrome B small subunit, mitochondrial precursor (CybS) proteins. SDHD encodes the small subunit (cybS) of cytochrome b in succinate-ubiquinone oxidoreductase (mitochondrial complex II). Mitochondrial complex II is involved in the Krebs cycle and in the aerobic electron transport chain. It contains four proteins. The catalytic core consists of a flavoprotein and an iron-sulfur protein; these proteins are anchored to the mitochondrial inner membrane by the large subunit of cytochrome b (cybL) and cybS, which together comprise the heme-protein cytochrome b. Mutations in the SDHD gene can lead to hereditary paraganglioma, characterized by the development of benign, vascularised tumours in the head and neck.
Statistics
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PSSM-Id: 461624
Aligned: 35 rows
Threshold Bit Score: 120.415
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6LO8_D        47 KINDIAN---TSKEASSSV-QMF-KPPEFSQFKDSYQKDYERIAKYTLIPLTMVPFYAsFTggvINPLLDASLSSIFLIY 121 Saccharomyces c...
Q17IC3        13 KFTTIPRsyqIRLFCQQSSsPKTkWRPSLGSSNYANHWRLDRAFSWILLGVLPLGLTY------PCKALDVIIAICVVGH 86  yellow fever mo...
Q0U9E4        63 RNQILPP---LPQKIEGTTnDPT-PVPNPDYSHGSYHWSFERIISAGLVPLTLAPFAA-GS---LNPVTDSILCALLVVH 134 Parastagonospor...
Q4WRP4        39 KKQILPP---LPQVIQGTMnDPA-PIPKPHPSEGSYHWTFERLVSVGLIPLTIAPFAA-GS---LNPVMDSVLCALLVLH 110 Aspergillus fum...
CAK37397      94 RSCLLCL--------LDAVnDPA-PIPKSHPTEGSYHWTFERIVSAGLVPLCIAPFAA-GS---MSPVMDAVICSAIVVH 160
EHA48766      40 RRNLLPP---LPQKIQGTVnDPA-PVPSPSPSHGHYHWTFERILAAGLVPLTVAPFAA-GS---FNPVMDAVLCSTLLLH 111
Q7SGY6        35 RKSLLPP---PPQRIEGTVnDPV-EVPPPSPSHGSYHWTFDRVVAAGLIPLTVAPFAA-GS---LNPTMDAVLAATILIH 106 Neurospora cras...
Q2HDF4        42 RRDLLPP---LPQHVDGTVnDAA-PVPEPSPSHGSYHWTFDRLVAASLVPLTVAPFAA-GS---LNPTLDAFLCATILIH 113 Chaetomium glob...
XP_001542173  72 RRDLLPP---PRQTIQGTMnDAA-PIPPTSPSHGSYHWTFERSVAVALVPLTIAPFAG-GS---VYPVMDAVICGTLLMH 143
Q9P7X0        28 VAKIFPP---PPQTIKGTVnDAA-VFPHHSKLHGSYHWDFERIIAIAMVPQVMIPLFT-GT---SHPLMDAALACTLITH 99  Schizosaccharom...
6LO8_D       122 LQYGFTSCIIDYIPKEKYP-RWHKLALYCLYGGSMLSLYGIYELETKNNGFVDLVKKLWN 180 Saccharomyces cerevisiae S288C
Q17IC3        87 QQTGLSSVVTDYVRKDLLRgMATKAAHGVTAGLSVATLVGLLYLTFADIGITETVRRIWA 146 yellow fever mosquito
Q0U9E4       135 SHIGFESCIIDYFPKKRIP-KLRAAAHWALRISTLLLGVALYSFETNDVGITEAVSRVWH 193 Parastagonospora nodorum SN15
Q4WRP4       111 SHIGFHASIIDYFPKRRVP-KTKTFLDWLLRAFTVTTAVGLYEFETNDVGITEAIKRVWK 169 Aspergillus fumigatus
CAK37397     161 SHIGFHASITDYFPTRRVP-KTHTFMIWLLRAFTLSTAVGLYEFETNDVGVTEALRRVWN 219
EHA48766     112 SHLGLQNVITDYLPQKRVP-KSRKAAMWLLNLATAVVGVGLYEFETNDVGLTEGVRRIWT 170
Q7SGY6       107 SHTGFGNIIVDYVPSKRVP-KARKVFTWGLNAATVLVGLALYEFETTDVGLTETIKRVWK 165 Neurospora crassa OR74A
Q2HDF4       114 SHTGFQNVIIDYLPKKRVP-RTRKAFMWGLNAATAVVGLALYEFETTDVGITETIKRIWT 172 Chaetomium globosum CBS 148.51
XP_001542173 144 SHIGFQACIIDYIPAWRMP-KARKAFDWLLRIMTLVTAVGLYEFETNDIGMTEAIKRIWK 202
Q9P7X0       100 AHLGFESCVIDYFPARRFK-KLSPLMHWILRGCTVLTLIGVYEFNTNDIGLTEGIKKLWK 158 Schizosaccharomyces pombe 972h-
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