Conserved Protein Domain Family
serpin_protozoa

?
cd19604: serpin_protozoa 
serpin family proteins from protozoa
This group includes a variety of serpin clades from various protozoa including Neospora caninum that causes neosporosis, Toxoplasma gondii that causes toxoplasmosis, and Hammondia hammondi. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.
Statistics
?
PSSM-Id: 381068
Aligned: 8 rows
Threshold Bit Score: 901.332
Created: 20-Sep-2017
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
reactive center
Feature 1:reactive center loop (RCL)
Evidence:
  • Comment:depending on the conformational state, the RC loop is surface accessible in the active form or buried and inserted as the central beta strand in the inactive form.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
XP_008889304    1 MTATPAGTLVRLYSSLVSAQSKSADGDCNFAFSPYAVSAVLAGLYFGARGTTREQLENHFFGGRSAADAAACLKEAIpaV 80  Hammondia hamm...
XP_003885819    1 MAATPAGTLVRLYSILVSASCKNAEGQCNFAFSPYSVSTALAVLYFGARGTSQEQLQSLYFDGRSPNDAANCLKEAIt-V 79  Neospora canin...
EPR63843        1 MTATPAGTLVRLYSSLVSGQHKSADGDCNFAFSPYAVSAVLAGLYFGARGTSREQLENHYFEGRSAADAAACLNEAIpaV 80  Toxoplasma gon...
XP_002371310    1 MTATPAGTLVRLYSSLVSGQHKSADGDCNFAFSPYAVSAVLAGLYFGARGTSREQLENHYFDGRSAADAAACLNEAIpaV 80  Toxoplasma gon...
KFG47346        1 MTATPAGTLVRLYSSLVSGQHKSADGDCNFAFSPYAVSAVLAGLYFGARGTSREQLENHYFEGRSAADAAACLNEAIpaV 80  Toxoplasma gon...
KFH05314        1 MTATPAGTLVRLYSSLVSGQHKSADGDCNFAFSPYAVSAVLAGLYFGARGTSREQLENHYFEGRSAADAAACLNEAIpaV 80  Toxoplasma gon...
KFG37789        1 MTATPAGTLVRLYSSLVSGQHKSADGDCNFAFSPYAVSAVLAGLYFGARGTSREQLENHYFEGRSAADAAACLNEAIpaV 80  Toxoplasma gon...
TGME49_217430   1 MTATPAGTLVRLYSSLVSGQHKSADGDCNFAFSPYAVSAVLAGLYFGARGTSREQLENHYFDGRSAADAAACLNEAIpaV 80 
Feature 1                                                                                         
XP_008889304   81 SQKEEGVDPDSQSSViLQAANRLYASKELVEAFLPQFGEFRETLEKALHTEALLADFKTSSNGEREKINEWVSSVTKRKI 160 Hammondia hamm...
XP_003885819   80 SEKEEATDLGRQSPVsLQSANRLYASKELVGASLPQFRDFREIIEKQLRTEALLADFQAHSRGEREKINAWVSDVTNRKI 159 Neospora canin...
EPR63843       81 SQKEEGVDPDSQSSVvLQAANRLYASKELMEAFLPQFREFRETLEKALHTEALLANFKTNSNGEREKINEWVCSVTKRKI 160 Toxoplasma gon...
XP_002371310   81 SQKEEGVDPDIQSSVvLQAANRLYASKELMEAFLPQFREFRETLEKALHTEALLANFKTNSNGEREKINEWVCSVTKRKI 160 Toxoplasma gon...
KFG47346       81 SQKEEGVDPDIQSSVvLQAANRLYASKELMEAFLPQFREFRETLEKALHTEALLANFKTNSNGEREKINEWVCSVTKRKI 160 Toxoplasma gon...
KFH05314       81 SQKEEGVDPDSQSSVvLQAANRLYASKELMEAFLPQFREFRETLEKALHTEALLANFKTNSNGEREKINEWVCSVTKRKI 160 Toxoplasma gon...
KFG37789       81 SQKEEGVDPDSQSSVvLQAANRLYASKELMEAFLPQFREFRETLEKALHTEALLANFKTNSNGEREKINEWVCSVTKRKI 160 Toxoplasma gon...
TGME49_217430  81 SQKEEGVDPDIQSSVvLQAANRLYASKELMEAFLPQFREFRETLEKALHTEALLANFKTNSNGEREKINEWVCSVTKRKI 160
Feature 1                                                                                         
XP_008889304  161 VDLLPPAAVTPETTLLLVGTLYFKGPWLKPFVPCEYSSLSKFYRQGPYGSIISQEGIKFMESTQVCSGALCFGFKHTDRP 240 Hammondia hamm...
XP_003885819  160 TDILPPSAVTSETILLLVSTLYFKGPWLKPFVPCERNGPSKFYRQGPSGATIFQDGIKFMESTQVCSDKFCYGFKHTDRP 239 Neospora canin...
EPR63843      161 VDLLPPAAVTPETTLLLVGTLYFKGPWLKPFVPCECSSLSKFYRQGPSGATISQEGIRFMESTQVCSGALRYGFKHTDRP 240 Toxoplasma gon...
XP_002371310  161 VDLLPPAAVTPETTLLLVGTLYFKGPWLKPFVPCECSSLSKFYRQGPSGATISQEGIRFMESTQVCSGALRYGFKHTDRP 240 Toxoplasma gon...
KFG47346      161 VDLLPPAAVTPETTLLLVGTLYFKGPWLKPFVPCECSSLSKFYRQGPSGATISQEGIRFMESTQVCSGALRYGFKHTDRP 240 Toxoplasma gon...
KFH05314      161 VDLLPPAAVTPETTLLLVGTLYFKGPWLKPFVPCECSSLSKFYRQGPSGATISQEGIRFMESTQVCSGALRYGFTHTDRP 240 Toxoplasma gon...
KFG37789      161 VDLLPPAAVTPETTLLLVGTLYFKGPWLKPFVPCECSSLSKFYRQGPSGATISQEGIRFMESTQVCSGALRYGFKHTDRP 240 Toxoplasma gon...
TGME49_217430 161 VDLLPPAAVTPETTLLLVGTLYFKGPWLKPFVPCECSSLSKFYRQGPSGATISQEGIRFMESTQVCSGALRYGFKHTDRP 240
Feature 1                                                                                         
XP_008889304  241 GFGLTLLEVPYIDIQSSMVFFMPDKPTDLVELEMMWREQPDLLNDLVQDMAETSGTELQDIELTIRLPYFKVSGETISLM 320 Hammondia hamm...
XP_003885819  240 GFGVTLLEVPYKDSDYSMAFFMPDNPSDLVELEQMWQEQPDLLSDLVQEMADASHAELQDVELTIRLPYFKVGGKTIALL 319 Neospora canin...
EPR63843      241 GFGLTLLEVPYIDIQSSMVFFMPDKPTDLAELEMMWREQPDLLNDLVQGMADSSGTELQDVELTIRLPYLKVSGDTISLT 320 Toxoplasma gon...
XP_002371310  241 GFGLTLLEVPYIDIQSSMVFFMPDKPTDLAELEMMWREQPDLLNDLVQGMADSSGTELQDVELTIRLPYLKVSGDTISLT 320 Toxoplasma gon...
KFG47346      241 GFGLTLLEVPYIDIQSSMVFFMPDKPTDLAELEMMWREQPDLLNDLVQGMADSSGTELQDVELTIRLPYLKVSGDTISLT 320 Toxoplasma gon...
KFH05314      241 GFGLTLLEVPYIDIQSSMVFFMPDKPTDLAELEMMWREQPDLLNDLVQGMADSSGTELQDVELTIRLPYLKVSGDTISLT 320 Toxoplasma gon...
KFG37789      241 GFGLTLLEVPYIDIQSSMVFFMPDKPTDLAELEMMWREQPDLLNDLVQGMADSSGTELQDVELTVRLPYLKVSGDTISLT 320 Toxoplasma gon...
TGME49_217430 241 GFGLTLLEVPYIDIQSSMVFFMPDKPTDLAELEMMWREQPDLLNDLVQGMADSSGTELQDVELTIRLPYLKVSGDTISLT 320
Feature 1                                                    ###############################      
XP_008889304  321 SALESLGVTDVFGSSADLSGINGGRNLFVSNVFHRCLVEIDEEGTDAAAGAAAGVACVSLPFVREQKVINIDRSFLFQTR 400 Hammondia hamm...
XP_003885819  320 SALETLGVTHVFGPNANLSGINGGKGLFLSNVFHQCVVEIDEVGTEAAAAAAAGVACTSLPLIREQRVIDIDRSFLFQIR 399 Neospora canin...
EPR63843      321 SALESLGVTDVFGSSADLSGINGGRNLFVSDVFHRCLVEIDEEGTDAAAGAAAGVACVSLPFVREHKVINIDRSFLFQTR 400 Toxoplasma gon...
XP_002371310  321 SALESLGVTDVFGSSADLSGINGGRNLFVSDVFHRCLVEIDEEGTDAAAGAAAGVACVSLPFVREHKVINIDRSFLFQTR 400 Toxoplasma gon...
KFG47346      321 SALESLGVTDVFGSSADLSGINGGRNLFVSDVFHRCLVEIDEEGTDAAAGAAAGVACVSLPFVREHKVINIDRSFLFQTR 400 Toxoplasma gon...
KFH05314      321 SALESLGVTDVFGSSADLSGINGGRNLFVSDVFHRCLVEIDEEGTDAAAGAAAGVACVSLPFVREHKVINIDRSFLFQTR 400 Toxoplasma gon...
KFG37789      321 SALESLGVTDVFGSSADLSGINGGRNLFVSDVFHRCLVEIDEEGTDAAAGAAAGVACVSLPFVREHKVINIDRSFLFQTR 400 Toxoplasma gon...
TGME49_217430 321 SALESLGVTDVFGSSADLSGINGGRNLFVSDVFHRCLVEIDEEGTDAAAGAAAGVACVSLPFVREHKVINIDRSFLFQTR 400
Feature 1                                                
XP_008889304  401 RVKRIQGLRAGESPAMRKDDDILFVGRVVDVGVLQSDGE 439 Hammondia hammondi
XP_003885819  400 KLRHTKDLKAGKLPVVRRDDDIFFVGRVVDMSALQSDGE 438 Neospora caninum Liverpool
EPR63843      401 KLKRVQGLRAGNSPAMRKDDDILFVGRVVDVGVLQSGGE 439 Toxoplasma gondii GT1
XP_002371310  401 KLKCVQGLRAGNSPAMRKDDDILFVGRVVDVGVLQSGGE 439 Toxoplasma gondii ME49
KFG47346      401 KLKRVQGLRAGNSPAMRKDDDILFVGRVVDVGVLQSGGE 439 Toxoplasma gondii GAB2-2007-GAL-DOM2
KFH05314      401 KLKRVQGLRAGNSPAMRKDDDILFVGRVVDVGVLQSGGE 439 Toxoplasma gondii VAND
KFG37789      401 KLKRVQGLRAGNSPAMRKDDDILFVGRVVDVGVLQSGGE 439 Toxoplasma gondii p89
TGME49_217430 401 KLKCVQGLRAGNSPAMRKDDDILFVGRVVDVGVLQSGGE 439

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap