7KJP


Conserved Protein Domain Family
Calici_coat

?
pfam00915: Calici_coat 
Calicivirus coat protein
Statistics
?
PSSM-Id: 459994
Aligned: 4 rows
Threshold Bit Score: 400.038
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
7KJP_A    2 MMASKD--------ATSSVDGASGAGQLVPEVNA-SDPLAMDPVAGSSTAVATAGQVNPID---PWIINNFVQAPQGEFT 69   Norovirus Hu/1968/US
P27410 1768 GKARAApqgeaagtATTASVPGTTTDGMDPGVVAtTSVITAENSSASIATAGIGGPPQQVDqqeTWRTNFYYNDVFTWSV 1847 Rabbit hemorrhagic ...
P89681  137 LRSTADvns--nftFRAESDGPGSTEIVTEEQGT-IVQQQPAPAPTALATLATASTGKSVEq--EWMTFFSYHTSINWST 211  Vesicular exanthema...
Q66915  108 gevaKAwdpn-lplFRLEADD---GSITAPEQGT-VVGGVIAEPSSQMSTAADMASGKSVDs--EWEAFFSFHTSVNWST 180  Feline calicivirus ...
7KJP_A   70 ISPNntpGDVLFDLSLGPHLNPFLLHLSQMYNGWVGNMRVRIMLAGCAFTAGKIIVSCIPPgfGSHNLTIAQATLFPHVI 149  Norovirus Hu/1968/US
P27410 1848 ADAP---GSILYTVQHSPQNNPFTAVLSQMYAGWAGGMQFRFIVAGSGVFGGRLVRAVIPP--GIEIGPGLEVRQFPHVV 1922 Rabbit hemorrhagic ...
P89681  212 VESQ---GKVLYSQALNPSINPYLDHISKLYSTWSGGIDVRFTVSGSGVFGGKLAALLVPP--GVEPIESVSMLQYPHVL 286  Vesicular exanthema...
Q66915  181 SETQ---GKILFKQSLGPLLNPYLEHLSKLYVAWSGSVEVRFSISGSGVFGGKLAAIVVPP--GVDPIQSTSMLQYPHVL 255  Feline calicivirus ...
7KJP_A  150 ADVRTLDPIEVPLEDVRNVLFHNNDRNQQTMRLVCMLYTPLRTCGGTGd-SFVVAGRVMTCPSPDFNFLFLVPP--TVEQ 226  Norovirus Hu/1968/US
P27410 1923 IDARSLEPVTITMPDLRPNMYHPTGDPGLVPTLVLSVYNNLINPFGGS--TSAIQVTVETRPSEDFEFVMIRAPssKTVD 2000 Rabbit hemorrhagic ...
P89681  287 FDARQTEPVIFTIPDIRKTLFHSMD-ETDTTKLVIMVY----KNGADT--KTTCSITVETRPSADFTFALLKPPgsLIKH 359  Vesicular exanthema...
Q66915  256 FDARQVEPVIFTIPDLRSTLYHLMS-DTDTTSLVIMVYNDLINPYANDsnSSGCIVTVETKPGSDFKFHLLKPPgsMLTH 334  Feline calicivirus ...
7KJP_A  227 KTRP---FTLPNLPLSSLSNsRAPLPISSMGISPdnvQSVQFQNGRCTLDGRLVGttpVSLSHVAKIRGTS 294  Norovirus Hu/1968/US
P27410 2001 SISPaglLTTPVLTGVGNDN-RWNGQIVGLQPVP---GGFSTCNRHWNLNGSTYG---WSSPRFGDIDHRR 2064 Rabbit hemorrhagic disease v...
P89681  360 GSIPs--DLIPRNSAHWLGN-RWWSMISGFSVQP---RVFQ-SNRHFDFDSTTTG---WSTPYYIPIEITI 420  Vesicular exanthema of swine...
Q66915  335 GSVPs--DLIPKTSSLWIGN-RFWSDITDFVIRP---FVFQ-ANRHFDFNQETAG---WSTPRFRPITVTI 395  Feline calicivirus (strain U...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap