Conserved Protein Domain Family
TruA

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COG0101: TruA 
tRNA U38,U39,U40 pseudouridine synthase TruA [Translation, ribosomal structure and biogenesis]
tRNA U38,U39,U40 pseudouridine synthase TruA is part of the Pathway/BioSystem: tRNA modification
Statistics
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PSSM-Id: 439871
Aligned: 352 rows
Threshold Bit Score: 187.618
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_014485158   1 M-----------------TRLRIDLAYDGGGFYGWAKQPN---L-RTVQGTIEDALHKVLRvpaddaaEPLRLTVAGRTD 59 
NP_213514      1 M-----------------PNYLLRLAFVGTNFYGWQVQPN---L-RTVQGEIQKALSQILC-------EDVKVTGCCRTD 52 
WP_013007709   1 M-----------------YKKKCVVEYDGTYFFGWQRQKD---L-RTVQGVIEAALSKIYK-------SSINIVGSGRTD 52 
WP_012499000   1 MvlpdsceqstfniarsrRNLKMLLEYDGTDFAGWQRQPQnlhQ-KTIQGEIESVLCRVLQ-------EPVELIAAGRTD 72 
WP_012508260   1 M-----------------KNIRVTVEYDGTSFAGWQRQSG---AiVTVQGEIEVALGKILQ-------EKISLAAAGRTD 53 
WP_012548743   1 M-----------------INWKVELSYIGKDFWGFQKQPG---K-RTVQGELEKVLKLLFD-------EDIKVIGAGRTD 52 
YP_002249342   1 M-----------------VNIKMTIQYDGTNYFGWQRQRK---G-RTIQATIEECLRKIFQ-------REIKIRGAGRTD 52 
WP_012674283   1 Mkk--------------rYNYKLTISYIGTRYSGWQRQKN---A-VGIQQIIEDLLEKLFK-------EKITLIGSGRTD 55 
WP_012675769   1 Mkk--------------nHNYKLVIMYIGKNYHGWQKQPK---H-RTVQGVLEEKLKVLFK-------EDIVLIGSGRTD 55 
WP_013012196   1 Ml----------------YNKKLIVEYVGTDFAGWQVQPN---G-RTVQEELHKALSKMYK-------TKVTVIGSGRTD 53 
WP_014485158  60 TGVHASHQVAHLDVS--DEVlnrcvghmtipVTEALTRRLKAVLPSDIVIHGIAVAPAGFDARFSALERTYVYRVADRSS 137
NP_213514     53 SGVHALDYIANFKTQ--KDF-----------PEEKLLKALNGILPKDVGVYAVKKVSEEFNARYSVKGKVYLYKIWNSEV 119
WP_013007709  53 TGVHAVGQVFHFVSE--RYL-----------ENRSVLLGLNSVLPEDVVIKHVEDVDLSFHAQKSAISKTYIYKIYNYQI 119
WP_012499000  73 AGVHAKAQVANFLTE--NSL-----------SISRLKHALNGLLPSQIKIIEIEDAPENFNARFDAKSRTYRYFLLTRy- 138
WP_012508260  54 KGVHARAQTANFFTA--SSL-----------EPSRIVHSLNSLLPQTIRISNPEEVDADFHARHSAKERQYRYFLIEEP- 119
WP_012548743  53 AGVHALGQVVNFKTKesKNF-----------SCDKLYKVLNKLLPGDIKIKKVEIVDDNFHARYSAKRRWYIYVIYNNEE 121
YP_002249342  53 AGVHALGQVATFKAE--LKM-----------SLDILKKVLNSLLPNDIKIIKLENVEDSFHPQHSVKRKSYIYYLCFDEE 119
WP_012674283  56 AGVHALNQVANFKTY--SYK-----------DPSTIYSYLNAKLPRDISVKKVEEVDLNFNARFSAKGKTYLYRIYTKP- 121
WP_012675769  56 AGVHALGQVANFKTI--SYR-----------KPEEIYRYLNATLPRDISVKSVEEVPLSFHARFSAKGKTYIYRIYTKP- 121
WP_013012196  54 SGVHALGQVANFRTE--RYI-----------PPENVHMGLNSMLPEDISISSVEDVPEDFHAQLNAVSKTYLYRIFPSRV 120
WP_014485158 138 EiDPRLRGCVLTVDESLDLELMNRAAALTIGLHDFGSFATPN-PGGTTIREVKTAYWR-----------Rvpitplvpda 205
NP_213514    120 R-NPFLYPFSWQVKREINTEVLRNILKKFEGTHDFRALTKLE-EERNTVINLEEVSLN-----------V---------- 176
WP_013007709 120 R-SALFRNRAWWIRDNIDVDLLNEYLKFFKGEKDFSAMCLKRsVPENPVRTINYIFAK-----------R---------- 177
WP_012499000 139 --SALLSRFTGIYRYDFDARAMNACCQEILGQHDFTSFSKAGsQTKTRICTIEKARWY-----------Q---------- 195
WP_012508260 120 --SAIYGRFAGCSFGKLDVAIMQQMAAILVGTHDFSAFSKEDrDNPGRICSVTACKWY-----------P---------- 176
WP_012548743 122 K-NLFLRDYCWWINKPLDKDLLNLSANLFKGIHDFRNFCVIEnYDNTN-VEIYESFWY-----------F---------- 178
YP_002249342 120 C-SCFIQRYVWHYPWKLDLSLMEEALSLFTGTKDFTAFSGST-DVKNKIRTVHDFTMQlltklcfmdmcL---------- 187
WP_012674283 122 --DPFLYGRGWFFDKDLDIVKMLQGIEILKKYKDLTSLAKEGnYIRKE-VDLREIKLY-----------Y---------- 177
WP_012675769 122 --DPFLHGFGWYISKKLDLKGMLEALEIVKKSKDLRSLSKKGeYLRED-VEIRELSMT-----------Y---------- 177
WP_013012196 121 R-SAMLAGRTWWVKDELNYKRMCELLKYFEGEHDFTSFCVQTsLRENNVRRINNIRCY-----------R---------- 178
WP_014485158 206 masheayrtpslESgLVVFTIVADAFARNMVRSLVGSCIKVGSGRKSLEWFAGKMADPVREGSSGPIAPQGLTLEHIAYP 285
NP_213514    177 ------------EYpLIEIRLKASHFLRYMVRRIVGTAVKISLGLYSEEVLEELLQGKGN--SPYTAPPQGLHLEKVLL- 241
WP_013007709 178 ------------DGdFINIEINANGFLHNMVRNIVGTVIDLYSDNSSPEKIEEILKSKDRKNAGRTAPPQGLYLKEVFY- 244
WP_012499000 196 ------------RKnGLMLEIRANRFLHSMVRLLVGTMIKVGNGELSVQDFDAIFSAKDVCLAATSAQPQGLFLWHVEYK 263
WP_012508260 177 ------------CKhYLVLRISADRFLRSMVRYLVDAMIRAGKGRLSVGDFCRMLETGVTTSQLNPALPAGLFLWDVLY- 243
WP_012548743 179 ------------KEdLLIYFVSAPFFLRKMVRFIVGSMVEVGLKKKELEDLEKYLKDRKEERFSSPAPASGLYLFKIDY- 245
YP_002249342 188 ------------NGnFIKFRIEADGFLRYMVRNLVGCIIEIGKGKLRIESIQEAFESGKRPSTMQTAPSNGLFLEKVIY- 254
WP_012674283 178 ------------DGkIIDIEITASHFLRNLVRRIVGHLVAIGRGSLSLQEFEDIIKAKDSSKGKFLAPPEGLYLKEVYY- 244
WP_012675769 178 ------------DGkIIEIQITASHFLRYMVRKIVGHVVQIGLGSLSIQEFENIIEAKDPTKGLFIAPPEGLFLKEVYY- 244
WP_013012196 179 ------------EDkVICIEINGNGFLHNMVRIIAGTVVEALRKGYGDEYIKEAIEGRDRSKAGPTAHAAGLYLKKVYY- 245
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