Conserved Protein Domain Family
YIP1

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COG5080: YIP1 
Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking and secretion]
Statistics
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PSSM-Id: 227412
Aligned: 5 rows
Threshold Bit Score: 230.433
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1723951    1 MSYGREDTTIEPDFIEPDAPLAASGGVADNIGg-------tMQNSG--SRGTLDETVLQTLKRDVVEINSRLKQVVYPHF 71  baker's yeast
19173019   1 ---------------------------MEFE------------EYG---EPYVDKFDLRSALLGRLPGDGPLLEELGIDF 38  Encephalitozoon cun...
19114793   2 TDIGKHNTEIEQDEMENLLRMDPVRSSLDVES----------RAIE--PDNIAGESIVETRFTGGDSLDEPIRVTLFNEF 69  fission yeast
19075695   3 YYNNPANLQYYDYSYTADNSFNTQSRAAGFY----------DEPL---HEPLSQGWLAAFSTSG-YPGEPSLLEELEINF 68  fission yeast
1724030    3 FYNTSNNANNGGGFYQPSAQFAVPQGSMSFQNtvgssntgnDNNLGvaPDPLPVGILHALSTKG-YPHEPPLLEEIGINF 81  baker's yeast
1723951   72 PSFFSPSDDGIGAADN------DISANCDLWAPLAFIILYSLFVSHAR------SLFSSLFVSSWFILLVMALHLRLTKp 139 baker's yeast
19173019  39 GTIKKESHLAFGVFQRkav-dfSFVKNADLSGPIVFVGLYTLGLILNYk-----IHFGYIYFISLLTTLSIYFLLNVLG- 111 Encephalitozoon cun...
19114793  70 RAIGEKLVYVLYPKNA------QVLRDWDLWGPLIFSLVIALALALSTdkiereSVFTVVVALIWFGEAVCSLNIKLLG- 142 fission yeast
19075695  69 GHIKQKTTHVLNPFKHvd---vHIMDDTDMAGPILFCLLFSTFLSLHGr-----SHFGYIYGIALLGSLSLHFVLRLMS- 139 fission yeast
1724030   82 DHIITKTKMVLIPIRFgsgvpqEILNDSDLAGPLIFFLLFGLFLLMAGk-----VHFGYIYGVALFGTISLHNLSKLMSn 156 baker's yeast
1723951  140 -----HQRVSLISYISISGYCLFPQVLNALVSQILLplayhigkqnrwivRVLSLVKLVVMAlCLMWSVAAVSWVTKSKT 214 baker's yeast
19173019 112 -----TKHIGFLECCSVLGYSFLPVVFFSFLNILMG--------------RISVELRVFYGLaFACWSSYAASVVFCRYL 172 Encephalitozoon cun...
19114793 143 ------ANISIFQSMCILGYSSFPLMIASIVCAFVP--------------LIFIRIPVIVAM--YAWTLFAAMGVLQ-NS 199 fission yeast
19075695 140 -----AKNLFFTRTVSVLGYSLLPLVVIAFFKNIFT--------------FNGIAGYALAAL-ACIWCTYAASAMFVGIL 199 fission yeast
1724030  157 ndtstQTNLQFFNTASILGYCFLPLCFLSLLGIFHG--------------LNNTTGYVVSVL-FVIWSTWTSSGFLNSLL 221 baker's yeast
1723951  215 IIEIYLWHSVFFgmagCQLFYNTSYICIKPN 245 baker's yeast
19173019 173 SLSNKHLVVGYP----LLLGYTGFVMVILF- 198 Encephalitozoon cuniculi
19114793 200 NLSNKKLLAVYP----LFLFYFSLAWIIFL- 225 fission yeast
19075695 200 QVNNMRFLVAYP----IALFYGVFAVITVFS 226 fission yeast
1724030  222 QLQNARLLIAYP----LLIFYSVFALMVIFV 248 baker's yeast
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