Conserved Protein Domain Family
antiterm_LoaP

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NF033641: antiterm_LoaP 
antiterminator LoaP
LoaP is a paralog of NusG with an extensive presence in Firmicutes. The founding member, from Bacillus amyloliquefaciens, was shown to serve as an antiterminator for the transcription of genes involved in antibiotic biosynthesis.
Statistics
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PSSM-Id: 468124
Aligned: 207 rows
Threshold Bit Score: -1
Created: 24-Apr-2023
Updated: 3-May-2023
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_051287069   3 WYALFVETGSEDIVQKCLKLQY----CPK--EVYSCVPKRLLPEKRGGKFYSVVKTLFPGYLFINTRMTPSIYYELKK-- 74  Paenibacillus t...
WP_033165459   3 WYALFVRTGKEDEVCENLKKLYelfsPKD--TYEVVVPKRGIYEYHEGKRTYVLRTLFPSYVLIGTDQIVKLYEIMKNhk 80  Clostridium sp....
WP_065547232   3 WYAIFVKTGKEDELCLYIKQIF----EKSkvQFELLVPKRELVEYYEGVKRLVKRTLFPGYILLNTDSIEQMYVFLSGkw 78  Lachnoclostridi...
WP_051931690   9 WYVLFVNSNQEEKVKEILQKRM----GEK---YKFMVPTRELRERKDGKWRKVRRKLFPGYVLIKGIMNVEVYYKIKK-- 79  Clostridium sp....
WP_106058416   9 WFVLYVNVNQEEKVKKILEKEI----GDE---YKFIIPTRELRERKNGKWHNVKRKLFPGYVLTKGIINIEVYYKIRK-- 79  Clostridium vin...
KUK73618      10 WYALYVLTGQEDKVRKILELAF----GDQ---LKVIVPKRELKERKAGTWRIVKKNLFPGYVFLKGIISTETYYSIKS-- 80 
WP_073126009   8 WYALFVITGQEEKTKVAIEATF------K--DIKAIVPTRELRERKSGKWEIVKRKLFPGYVLLKGEISVEDYYKMKT-- 77  Asaccharospora ...
WP_026894349   8 WHAIFVFTGQEEKVKKALENTF----GNQ---IKCIVPKRELRERKSGKWHKVKRKLFPGYVLIKGDIDVEKYYKIKE-- 78  Clostridiisalib...
WP_105618944  10 WYALFVLGGQEEKVKKSLDAEY----GNE---MEVIIPTRQLRERKAGQWYQVKRKLFPGYVLIKSKMTVETYYQIKD-- 80  Vallitalea okin...
WP_092477640   3 WYVICVESNNEERVRNYIEYILh---DLDi-AYSILIPKRELVERRKGVNKKVLKCLFPGYIFVNTPQIVDFYYGVKV-- 76  [Clostridium] p...
WP_051287069  75 LPKYYRLLRNsafmldkinrkpqslldptkedgselynyDDFFNQIEEAEIRQILQLIN-DKNI-IEYSNVIVENSKVCV 152 Paenibacillus t...
WP_033165459  81 SSHIIRMLKN-----------------------------DNYFQEIDIREIGVIIDLIN-QEGV-IGISDVLVEDEKVNI 129 Clostridium sp....
WP_065547232  79 HSGIYALLKSg-----------------------------gLFQEIPATEIVPIINLVN-KDGN-ITSSSLLLVNDKVII 127 Lachnoclostridi...
WP_051931690  80 TPGIIKLLRS-----------------------------EDEVLTIDERELRLLKILID-NDDNnIGISKLYKQNDSVRI 129 Clostridium sp....
WP_106058416  80 VYGVIKLLRN-----------------------------ENEVLTIDEKELKVLKILIDnQDNN-IGVSTLYKENDSIRI 129 Clostridium vin...
KUK73618      81 LPVAARLLKD-----------------------------EDGPLKIHDSEISVLRIFFEtDDGN-VKISKAYKENDVIRI 130
WP_073126009  78 LPLATNFLKD-----------------------------EDGLLEIDKRELRALNILLR-EDEN-VGISIAYKIDEKIKI 126 Asaccharospora ...
WP_026894349  79 IPILTKLLKD-----------------------------RDGPLRIEEKELKVLNILITnDDGN-IGISKLYKENEEVRV 128 Clostridiisalib...
WP_105618944  81 TPGLIKLLRD-----------------------------EEEPLKIQDEELEVLNILIKnREGN-IGISILFKENDQVKV 130 Vallitalea okin...
WP_092477640  77 IPSIHKFLMS-----------------------------DGMFLKVEEAEIEQLYLLLN-CEGV-AVFSEGRLVGERVII 125 [Clostridium] p...
WP_051287069 153 QSGPLYGLEGMIKKIDKRKRRAQIAVSFFGGEKLIDVGIELIVP 196 Paenibacillus taiwanensis
WP_033165459 130 IDGPLIHYKGIIKKINKRKGRAKIQVDFLNKQCFVDIAIRCLER 173 Clostridium sp. KNHs205
WP_065547232 128 KEGPLLNYTGLIRKINARKGRAKIILNFLGRECKIDIAIKCLSi 171 Lachnoclostridium sp. YL32
WP_051931690 130 TAGPLVGMEGQILKVDSRKGRAKVCLSFMNEERVVELGVELVDK 173 Clostridium sp. KNHs214
WP_106058416 130 LAGPLVGFKGQIVKVDSRKGRAKVNISFMNEERIVELGIELVDK 173 Clostridium vincentii
KUK73618     131 VEGPLSGLEGIIQSFDIRKGRAKVKIDLLGSTKTIQLGVELIDK 174
WP_073126009 127 IQGPLAGFEANIESIDARKGRAKVKMDFLGETRIVQLGIDFIDK 170 Asaccharospora irregularis
WP_026894349 129 INGPLVGLEGYIQSIDARKGRAKVKIDFLGDSRIVQLGIDFVDK 172 Clostridiisalibacter paucivorans
WP_105618944 131 VDGPLVGLEGLIKDINKRKGRAKVKLQFLGEERVIDLGIELVDK 174 Vallitalea okinawensis
WP_092477640 126 ERGPLCRCTQNVVKIDKRKKRAKIAIQLAKKVIHVQLGLDVRT- 168 [Clostridium] polysaccharolyticum
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