Conserved Protein Domain Family
RlmE

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COG0293: RlmE 
23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ [Translation, ribosomal structure and biogenesis]
23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ is part of the Pathway/BioSystem: 23S rRNA modification
Statistics
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PSSM-Id: 440062
Aligned: 344 rows
Threshold Bit Score: 226.876
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_045531005  15 LNQHANDPWVKLAQKEGYRARAAFKLQEIDQTLHLVRPGQCIVDLGCAPGAWCQYLRRRLApdgaaagalkGRIIGIDLL 94 
NP_240200     14 LLEHFQDQYVKAAKKNNIRSRAWFKLEQLDKNNKIFKIGMNVIDLGAAPGSWSQYASNRIGk--------kGRIIACDIL 85 
WP_011450621  50 IRRQVNDQYVSLAKKEGYRSRSAYKLIEINDKFKILQRGRFVLDLGSSPGGWAQVASKNTAiid----stePTVVAVDIQ 125
WP_011452661   7 LHRQLNDPYVSLAKKQGYRSRATFKLIEMDSKFSIFKKGQYVLDLGSSPGGWSQFAAQRVShn------nnNPVFAVDIQ 80 
WP_011451935  19 LYRHVNDPFVKKAKAEQYRSRAAYKLLEIDEKFNLIRKGFVVLELGSAPGGWSQVIADILNg--------tGRLIAVDLA 90 
WP_014354307  10 LSRHFSDKFVKESKRFGYRSRAWFKLDEMQKANNIITSGMTVLDLGSSPGGWSQYASQKVNn--------lGHVISCDIK 81 
WP_041193077  11 LHNYVNDFYVKLAKKEGYRARSVYKLQEIDAKERLIKPGQIIVDLGSSPGSWSQYIRKKISynsk---ninGTIIALDVL 87 
WP_041069159  14 LRKHFSDKYVKQAHEKKLRSRAYFKLEEIQKKEKIFYPGMDVLDLGSSPGSWSQYAAKCIQp--------hGYVIACDIL 85 
WP_041063446  13 IKKHFNDQYVQEAHSKKLRSRAWFKLEQINKSEKIFKNGMIIIDLGSSPGGWSQYAQKYIQk--------kGMIISCDIM 84 
WP_102241915   1 MTFKVKDHYFHKAKKDNFLARSVYKLEEIDERFKILKKNDQVIDFGYHPGSWVQYTSEKVGv--------nGLVIGADVR 72 
WP_045531005  95 PMEPI----EGVQFIQGDFGDAQLLAQLQQALAQpmpavggaesaeaaptraaeaalRPVDLVLSDMAPNLSGIEGVDAA 170
NP_240200     86 PIRPI----TGVDIFQGDFRNKKTLNLMLNTFSN-----------------------ITFHLVMSDMAPNITGNFSIDMP 138
WP_011450621 126 SMKDI----HNVSFVQCDIDSD--HDLLNEKLSG-----------------------RKFDVVLSDMAPKSCGHRQVDHA 176
WP_011452661  81 NMDAI----PNVIFIQCDIIND--IELLSDKFHN-----------------------KKFDVILSDMAPKACGNKQVDHA 131
WP_011451935  91 DMDPI----SGVEVVKLDIELQR--KELYEYISG-----------------------VELDVIVSDLAPSASGSRVTDSI 141
WP_014354307  82 PMLEV----SKVSFILGDAFKKDVLKKICKI-K------------------------NKVDVILCDIAPNITGITEIDHP 132
WP_041193077  88 KMKPI----PNVNFILGDIRNKCTINNLKKILNG-----------------------RKLDLILSDIAPNLSGVSVVDSA 140
WP_041069159  86 PMKPM----INVKFFQGDIRKT-VLQDIFNSIDT-----------------------TNIQVVMSDMAPNISGIPNIDIP 137
WP_041063446  85 PMKPI----QKVKFFQGDFFDSFFLEKITKCLNN-----------------------KKAHIIMSDMSPNLSGISAIDIP 137
WP_102241915  73 DINKKllgvPNVRLFQRDILTIETMQELGVS--------------------------DQFDVVLSDMAPNTTGIMSVDQA 126
WP_045531005 171 RITHLVELALDFARSQLKPEGALVAKVFHGSGYQ-EQVQAFRAAFRQVKAIKPKASRDKSSETFLIGLG 238
NP_240200    139 RIIELCKLALKISEHVLSKNGIFLLKSFQGEGFN-ELYKEIKMLFKKIKICKPKTSRTRSREIFILATR 206
WP_011450621 177 NIINLCELARDIALEYLNPNGSFVTKLLHGEYEQ-EFRRSIMTHFGVVSYFKPKSSRKDSSEIYLVALK 244
WP_011452661 132 NIINLCEISLDIVVRFTRENGVFITKILQGEYEK-EFYQSMKTYFQSVKYFKPKASRKDSSEMYLVGLG 199
WP_011451935 142 SSIRLAELVLHYAKNSLKKFGTVVTKILRGSEDEyRFVNSLRKQFKKIEYFKPDASRKASREIYLILLG 210
WP_014354307 133 KCISINYKALNLCKYILLKNGKFIIKSFNGSEFK-RYYTAIKKLFKKTKIFKPVASRLNSQEIYIIAIG 200
WP_041193077 141 NIEYIINIILEFTQEYIKPSGSILLKCFYGINYK-EIFNKFYCVFKSISLKKPKASHKNSSEIFLLGKK 208
WP_041069159 138 NTIYLVESALKISVKVLSDKGSFLVKIFQGEGFN-ESFKKISLFFRKVKIIKPNASYLTSREVYILAKQ 205
WP_041063446 138 KSINLLNSVLNFSCNFLRNNGTLLTKTFLGKDFD-QCFKNFHSIFKEIKIIKPIASKLTSREVYILAKE 205
WP_102241915 127 RSLNLVEMVFFLMPKFLKPGGNTVIKVFESNDAQ-VFLKEQKKLFSEFHYLRPKSTRSVSKEYFVIGKD 194
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