Conserved Protein Domain Family
Transmemb_17

?
pfam09799: Transmemb_17 
Predicted membrane protein
This is a 100 amino acid region of a family of proteins conserved from nematodes to humans. It is predicted to be a transmembrane region but its function is not known.
Statistics
?
PSSM-Id: 462907
Aligned: 89 rows
Threshold Bit Score: 54.5097
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
jgi:MICPUN_50670 271 YYYYFGICWDVTFVLFTFAIMIWKGIKMPY-PKydyQkrdyesVWSIEFAFLFVFIIFEWPRLSLLNKANRGTHHLTMYA 349
CBN78776          52 ILIYYNGLLSLIYFVLGGGLVIEKLYNYRFeSEl---------QRTVLAPIFISWAIAEVHRFYFGYKGNIKEMVPHMCA 122
A0DHL5            39 KLLYFNAYFSLLFLYVTLGINIQRLWivk-----------snlMDTLNLVLLLIWAVLEGFRLSNGYSGNIKEQFPELFS 107 Paramecium ...
XP_003063494      51 MLIHYNAYFALAWWIATVTSTLFKTKGSA---T---D------DDDVRPVMIAMFMIFEPCRLYCGYAGNLQEKIPLMAG 118
jgi:MICPUN_64352  57 MLISFNVYFSVCFWVATVVATFVKTNGAR---E---D------FDEIRPVMICMYAVFEPARLYAGFAGNLQEQVPMLIG 124
XP_015794176      36 ISLYFNIYFSPIYFITLYLSYQRFEDELK---E---M------EVFLTKTLLIIGSIIEIPRLYLGYTGNYTHRVPHILC 103
EFX85355          49 MSLYFNLVYYPVWLAIILASFVAKHQCFG---W---F------SYLLLGIGVSACCVTEATRIYLGMSGNLSEQVAELST 116
XP_002945688      32 QLLYYRIFFNIAWLLFWMVFIFKNYW----------VglelkdNDIVRTIFFIFWFLAEPIRLFAGWYGNLQENLPWLLM 101
PIC38081           1 MSIYFNLCMYPMHLINLCLSLYFKHKLLS---L---T------YQVIAFSASLVHVGSEGVRLGLGFYGNLAENMSALFG 68  Caenorhabdi...
XP_001014645      76 QLMYFNSFYTFIHGYFLYFSIFYKFKvcd-----------nilGCIIQLVILTIWALFEFFRLNNGYSGNINETFPEFVS 144 Tetrahymena...
jgi:MICPUN_50670 350 SILLAAPIVAYH----LWAMFSATYVLKIDVFMNGVSLAFC 386
CBN78776         123 FLLMTVFPQMFCl---AFLAFFQEHQFPVDPILGAIHIAFL 160
A0DHL5           108 FVLITIVSLALQ----VMQYIIPTLNYPMQLGLVIIQTVLY 144 Paramecium tetraurelia
XP_003063494     119 FVLLSFFVVLPLh---AYFWWGQDDASPFDKSLNNFACVLI 156
jgi:MICPUN_64352 125 FVALSFCVALPLh---FYFLAGQMGVVAFDKALNLFAVVYV 162
XP_015794176     104 FWLMTTFIQFPVq---LMMRTSPLTVKPFLATVNVVMVIFL 141
EFX85355         117 FWFTTLLVQLPLv--tIIL----IVALSLSQILEIVALSIS 151
XP_002945688     102 FTILSLVPEQGTi---LYLLVGTSRRTAYTRAVQMVMLVLQ 139
PIC38081          69 FLITTIIIQIPLt--vFLAVNGAFLNLPLEYVFYTLIVIFS 107 Caenorhabditis nigoni
XP_001014645     145 FILLSIANIILTigfvVIAQIIFKFFFPLEVICVVIEVLFL 185 Tetrahymena thermophila SB210
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap