1YT3


Conserved Protein Domain Family
Rnd

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COG0349: Rnd 
Ribonuclease D [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 440118
Aligned: 413 rows
Threshold Bit Score: 226.677
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1YT3_A         5 MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFD------GEHLALIDPLGITDWSP-L-KAILRDPSIT 76 
AFZ24942       3 YLTTASEIHCLTDEYSKSKTLWIDTEVADYKSRKPKLSLIQILDnpqdmsGDCVYLLDVLDQPDVIDnFiEQIMVNSAIE 82 
WP_010995866   3 YLTDAREIRAIVAGYTQATTLWIDTEVADYKSRNPRLSLIQVLDdpndmsGDRVYLLDVLDQPDLVAdFvDKIMVNTNIE 82 
WP_012411986   3 YLTSASEISAIVAEYTNIKTLWIDTEVADYKSRNPRLSLIQVLDnpqdmsGDRVYLLDVLDQPNIIAeFiEKIMINSAIE 82 
WP_015131346   3 YLTSPSEIRHIIAEYTKARTLWLDTEVADYKSRRPRLSLIQVLDnpqdmsGDRVYLLDVLDQPDVVAeFvEQIMVNPLIE 82 
WP_044292032   3 YLKSGDEIRSIVAKYTQSQTLWLDTEVADYDTRNPRLSLIQVLDdstdltGESVYILDVLDQPEIVTeFiDTIMINSSVE 82 
WP_015201900   3 YLTEATEIKALIDKFTRSSILWLDTEVADYYTKKPRLSLIQVLDdpedltGDKTYIFDVLNQPELGAyFiTQIMQNTDIE 82 
WP_015187019   3 YLRDASEINALIAQYTHKKTLWVDTEIADFNTHNPRLSLIQVLGdpsdtiGKTVVILDVIDQPEIVEnFiDSIMCSPTIE 82 
WP_015217323   3 YITAASEIRCLIAKYSKAQTLWIDTEVADYKSRHPKLSLIQILDnpqdmsGNSIYILDVLEQSEVIAdFiEQIMMNVDIE 82 
WP_006198279   3 YLNSASNIRAKVAEYTNAKTLWIDTEVADYKSRNPRLSLIQVLDdptdmsGDRVNLLDVLNQPDVVGeFiEQIMINPEIE 82 
1YT3_A        77 KFLHAGSEDLEVFlnvfG-ELPQPLIDT-QILAAFC---GRpMSWGFASMVEEYSGV-TLDKSESRTDWLARPLTERQCE 150
AFZ24942      83 KVFHNASFDLKFL----GnKQAKNITCTlEMAKKIPyylLPlPNYQLKTLATELCKFnNIDKQEQTSDWGKRPLTEEQIE 158
WP_010995866  83 KVFHNANFDVKLL----GnKQARNITCTlEIAKKIPyylLPvQNYQLQSLAKLLCNFnNIDKQEQGSNWGQRPLSEEQIE 158
WP_012411986  83 KVFHNASYDLKFL----GnKKAKNITCTlEMVKKIPyhiLPlPNYQLKTIATALCSFnNIDKQEQTSDWGKRPLTEEQIE 158
WP_015131346  83 KVFHNASYDVKFL----GsKQVKNITCTlEIAKKIPyylLPlPNYQLKTLATVLCDFnNIDKQEQNSDWGKRPLTEEQID 158
WP_044292032  83 KVFHNAKYDLRFL----GkKKAKNVTCTlETAKQIPyyvLPlPNYQLKTLAMTLCHFqDIDKQQQSSDWGIRPLSEEQIE 158
WP_015201900  83 KVFHNASYDLRFL----GkEQAKNVTCTlQMAKKIPyyiLPlPNYQLKTLVTELCDI-NLDKSEQGSNWGRRPLTAKQLQ 157
WP_015187019  83 KVFHQASYDLKFL----GkNKAKNVTCTlEMAKNIPyylLPlPNFSLKTLVEALYHI-NVDKTEQTSDWGQRPLSDIQLN 157
WP_015217323  83 KVFHNASYDVKFL----GsKKAKNITCTlEIAKQIPyyiLPlPNYQLKTLATVLCNFhGIDKQEQSSDWGIRPLTDEQIE 158
WP_006198279  83 KVFHNANYDLKFL----GkKRAKNITCTlEIAQKIPyyiLPlPNYQLKTLATALCRFnYIDKQEQSSDWGRRPLTEGQIE 158
1YT3_A       151 YAAADVWYLLPITAKLMVETEaSGWLPAALDECRLMQMRrqevvapedaWRDITNAWQ-LRTrqlaclqLLADWRLRKAR 229
AFZ24942     159 YAYLDCIYLAQVHWHLLKLQA-ENITDPTTEDLTSLGAK----------YSQLEQQRKlVTS-------ECEHLQERIKK 220
WP_010995866 159 YAYLDCIYLAQIHRRLLELQI-ESNPDPETLDITVINSR----------FSQIEEQWKlLNS-------EYEYLQEQLKK 220
WP_012411986 159 YAYLDCIYLAQIHSNLLSLQA-KANPEPATEDLTSLSTR----------YSQLEQQWKlLNS-------EFEHLQERMKK 220
WP_015131346 159 YAYLDCIYLAQVHSQLLELQL-KANPDPATENLTVLGTR----------YSQLEQQSKiLQS-------EFEHLQERVKK 220
WP_044292032 159 YAYLDCIILAQVHLRLLELTQ-NINFDAATEDLTLLGAK----------YVELEQQWKlLKS-------EFEHLQERIKQ 220
WP_015201900 158 YVKMDTVYVAQIHSRLQDLMT-RCYPPIETEDLEALAVR----------YQQIEHQWKqITS-------QMEHIQERVKK 219
WP_015187019 158 YAKMDPVYLAMVHQKLLQLQA-VVYPNPETEDLTSLAAR----------YLQLKQQLQlLSS-------EVEHIETRLKA 219
WP_015217323 159 YAYFDCIYLAQIHSQLLALQA-TINPAPETENLTLLSET----------YTEVEQQRKlINS-------EFEHLQERLKK 220
WP_006198279 159 YAYLDCIYLAQVHLQLLELQV-ASNPDPKTEDLTALDAR----------YSELSENWQlLKS-------EFEHLQERFKK 220
1YT3_A       230 ERDLavnFVVREEHLWSVARympGs-LGELDS 260
AFZ24942     221 AMQV---QNVSETAYCQLNSyerKtvKVTFGE 249
WP_010995866 221 AMQT---QNISETSTYKLTSyqrKvvKVQFSE 249
WP_012411986 221 AMQA---QNISETSYHKLTSydrTtvKATFSE 249
WP_015131346 221 AMQI---QNVSETSYCQLTSyerKtvKVAFAE 249
WP_044292032 221 AMLA---QNLSETSDFKLNSyerTttKVPFSE 249
WP_015201900 220 AMQV---QNIPETSFFKLSVsdrTtiKTNFTE 248
WP_015187019 220 AMQT---QRISETDYLKLSRsqrQttKVEFSQ 248
WP_015217323 221 AMQA---QNVSETAYCQISNyerKtvKVKFKE 249
WP_006198279 221 AMQA---QNVMETSVCKLISyerQtvKVPLTE 249
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