1ML4,1RAA,2RGW,3R7D


Conserved Protein Domain Family
asp_carb_tr

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TIGR00670: asp_carb_tr 
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aspartate carbamoyltransferase
Aspartate transcarbamylase (ATCase) is an alternate name.PyrB encodes the catalytic chain of aspartate carbamoyltransferase, an enzyme of pyrimidine biosynthesis, which organizes into trimers. In some species, including E. coli and the Archaea but excluding Bacillus subtilis, a regulatory subunit PyrI is also present in an allosterically regulated hexameric holoenzyme. Several molecular weight classes of ATCase are described in MEDLINE:96303527 and often vary within taxa. PyrB and PyrI are fused in Thermotoga maritima.Ornithine carbamoyltransferases are in the same superfamily and form an outgroup. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]
Statistics
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PSSM-Id: 273209
Aligned: 14 rows
Threshold Bit Score: 388.641
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1ML4_A         6 RDVISIRDFSKEDIETVLATAERLERELKEKG-QLE-YAKGKILATLFFEPSTRTRLSFESAMHRLGGAVIGFAEASTSS 83  Pyrococcus abys...
Q58976         2 KHLISMKDIGKEEILEILDEARKMEELLNTKR-PLK-LLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSS 79  Methanocaldococ...
O27464         3 ENVISIKDFKREDIEFILREAEKMEPFASGEK-SSS-ALRGKILGMMFYEPSTRTRLSFETAMKRLGGDVVGFADTGATS 80  Methanothermoba...
Q9YBD4         9 RDVISITDFTRGDLELLFRQADVIESKAGSK--P----LDGKVVALAFFEPSTRTRLSFETAVKRLGGSTLLISGEEAIS 82  Aeropyrum perni...
P05654         2 KHLTTMSELSTEEIKDLLQTAQELKSGKTDN------QLTGKFAANLFFEPSTRTRFSFEVAEKKLGMNVLNLDG-TSTS 74  Bacillus subtil...
P74163        10 NHILDLTDWRGEELDIVLQTATTFQQVLSGQT-KKVpALQGQVVTNLFFEPSTRTRSSFELAAKRLSADVMNFSP-GTSS 87  Synechocystis s...
O25716         6 RHLLQTSDLSLDEIKLLLEKASVYANDFNAVSlETKeKMHNKIIVALFFENSTRTVSSFEIASLRLGAKIVKLNM-QTSS 84  Helicobacter py...
WP_000002014   8 KHIISINDLSRDDLNLVLATAAKLKANPQPE------LLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTS 81  Escherichia coli
1RAA_A         7 KHIISINDLSRDDLNLVLATAAKLKANPQPE------LLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTS 80  Escherichia col...
2RGW_A         2 KHLISMKDIGKEEILEILDEARKMEELLNTKR-PLK-LLEGKILATVFYEPSTRTRLSFETAMKRLGGEVITMTDLKSSS 79  Methanocaldococ...
1ML4_A        84 VKK-GESLRDTIKTVEQY-CDVIVIRHPK-EGAARLAAEVA-----EVPVINAGDGSNQHPTQTLLDLYTIKKEFG---- 151 Pyrococcus abys...
Q58976        80 VAK-GESLIDTIRVISGY-ADIIVLRHPS-EGAARLASEYS-----QVPIINAGDGSNQHPTQTLLDLYTIMREIG---- 147 Methanocaldococ...
O27464        81 AVK-GESLADTAMMLSAY-SDAIVIRHNL-EGAARYISDVV-----DVPVINAGDGAGQHPTQTLLDLYTMKRFFG---- 148 Methanothermoba...
Q9YBD4        83 VAK-GENLADTITMLDSY-ADAIVIRHRY-EGAALYAAEVA-----EKPVINGGDGRQHHPTQAMLDLYTVYSLFG---- 150 Aeropyrum perni...
P05654        75 VQK-GETLYDTIRTLESIgVDVCVIRHSEdEYYEELVSQVN------IPILNAGDGCGQHPTQSLLDLMTIYEEFN---- 143 Bacillus subtil...
P74163        88 LTK-GETILDTAKTYLAMgSDIFVIRHQQ-AGVPHFIASQMdrlqtGVKVLNAGDGQHEHPSQGLLDLFTICSQFApdnp 165 Synechocystis s...
O25716        85 ASK-GETLTDTFKNIHAMqPDAIITRHAF-SSAPFKLAEFS-----QCPLINAGSGVSAHPTQALLDLLTLYQHFGsl-- 155 Helicobacter py...
WP_000002014  82 LGKkGETLADTISVISTY-VDAIVMRHPQ-EGAARLATEFSg----NVPVLNAGDGSNQHPTQTLLDLFTIQETQG---- 151 Escherichia coli
1RAA_A        81 LGKkGETLADTISVISTY-VDAIVMRHPQ-EGAARLATEFSg----NVPVLNAGDGSNQHPTQTLLDLFTIQETQG---- 150 Escherichia col...
2RGW_A        80 VAK-GESLIDTIRVISGY-ADIIVLRHPS-EGAARLASEYS-----QVPIINAGDGSNQHPTQTLLDLYTIMREIG---- 147 Methanocaldococ...
1ML4_A       152 ---RIDGLKIGLLGDLKYGRTVHSLAEALTFY-D-VELYLISPELLRMPRHIVEELREKGM-KVVETTTLEDVIGKLDVL 225 Pyrococcus abys...
Q58976       148 ---RIDGIKIAFVGDLKYGRTVHSLVYALSLF-EnVEMYFVSPKELRLPKDIIEDLKAKNI-KFYEKESLDDLDDDIDVL 222 Methanocaldococ...
O27464       149 ---RIGSLRVALVGDLKYGRTVHSLAYALAVF-G-ASMSFVSPPVLRMPDNIIHDLRRAGV-EVKETERLDDVIDEVDVL 222 Methanothermoba...
Q9YBD4       151 ---TVDGLTYGVLGDLRYGRAASSFILGLSLF-NpRHVYLISPPQLRARREVLEALEKRGV-PYTEVERLQDVLGELDVL 225 Aeropyrum perni...
P05654       144 ---TFKGLTVSIHGDIKHSRVARSNAEVLTRL-G-ARVLFSGPS------EWQDEENTFG-----TYVSMDEAVESSDVV 207 Bacillus subtil...
P74163       166 aiqCLQGKKIAVVGDILHSRVARSNLWSLTTA-G-ADVHLAGPPTL-LPKEFQQLTLAPGSgKLHCHWQLQPALEGADIV 242 Synechocystis s...
O25716       156 --eNLKGKKIAFIGDVKNSRVANSNIKLLQRL-G-LEIMLCAPS------SMLPSVSLK------TTHNVEEAIAFADIL 219 Helicobacter py...
WP_000002014 152 ---RLDNLHVAMVGDLKYGRTVHSLTQALAKF-DgNRFYFIAPDALAMPQYILDMLDEKGI-AWSLHSSIEEVMAEVDIL 226 Escherichia coli
1RAA_A       151 ---RLDNLHVAMVGDLKYGRTVHSLTQALAKFdG-NRFYFIAPDALAMPQYILDMLDEKGI-AWSLHSSIEEVMAEVDIL 225 Escherichia col...
2RGW_A       148 ---RIDGIKIAFVGDLKYGRTVHSLVYALSLFeN-VEMYFVSPKELRLPKDIIEDLKAKNI-KFYEKESLDDLDDDIDVL 222 Methanocaldococ...
1ML4_A       226 YVTRIQKERFP--DEQEYLKVKGSYQVNLKVLEKAKd--eLRIMHPLP--RVDEIHPEVDNTKHAIYFR-QVFNGVPVRM 298 Pyrococcus abys...
Q58976       223 YVTRIQKERFP--DPNEYEKVKGSYKIKREYVEGKK----FIIMHPLP--RVDEIDYDVDDLPQAKYFK-QSFYGIPVRM 293 Methanocaldococ...
O27464       223 YVTRIQKERFP--DPEEYSRIRGAYHIDGSTVADRD----LIVMHPLP--RIDEISPEVDSLPQAMYFR-QAFYGVPVRM 293 Methanothermoba...
Q9YBD4       226 YVTRIQKERIP--DPREYESLRGSYRVTLDLLESFAke-sLKVLHPLP--RVDEIDFSVDSSRYQAYFT-QARLGVRVRM 299 Aeropyrum perni...
P05654       208 MLLRIQNERHQ--SAVSQEGYLNKYGLTVERAERMKr--hAIIMHPAPvnRGVEIDDSLVESEKSRIFK-QMKNGVFIRM 282 Bacillus subtil...
P74163       243 MTLRLQKERMTahLLPSLREYHHYFGITHDRLKVCQp--gVKVLHPGPvnRGVEISSELMDDPDISLIQdQVTSGVAIRM 320 Synechocystis s...
O25716       220 MSLRTQTERHNtpIFASLKDYGNAYCITQQRLKAHAknkeVIILHPGPvhRDIDIESAVLEDERSKVLE-QVKNGVAMRM 298 Helicobacter py...
WP_000002014 227 YMTRVQKERL---DPSEYANVKAQFVLRASDLHNAKa--nMKVLHPLP--RVDEIATDVDKTPHAWYFQ-QAGNGIFARQ 298 Escherichia coli
1RAA_A       226 YMTRVQKERL---DPSEYANVKAQFVLRASDLHNAKa--nMKVLHPLP--RVDEIATDVDKTPHAWYFQ-QAGNGIFARQ 297 Escherichia col...
2RGW_A       223 YVTRIQKERFP--DPNEYEKVKGSYKIKREYVEGKK----FIIMHPLP--RVDEIDYDVDDLPQAKYFK-QSFYGIPVRM 293 Methanocaldococ...
1ML4_A       299 ALLALVLG 306 Pyrococcus abyssi GE5
Q58976       294 AILKKLIE 301 Methanocaldococcus jannaschii DSM 2661
O27464       294 ALLRLLIS 301 Methanothermobacter thermautotrophicus str. Delta H
Q9YBD4       300 ALMNLVMR 307 Aeropyrum pernix K1
P05654       283 AVIQRALQ 290 Bacillus subtilis subsp. subtilis str. 168
P74163       321 ALLYLLGT 328 Synechocystis sp. PCC 6803 substr. Kazusa
O25716       299 AVLEFLLL 306 Helicobacter pylori 26695
WP_000002014 299 ALLALVLN 306 Escherichia coli
1RAA_A       298 ALLALVLN 305 Escherichia coli K-12
2RGW_A       294 AILKKLIE 301 Methanocaldococcus jannaschii DSM 2661
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