Conserved Protein Domain Family
RecJ_Meth

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NF040701: RecJ_Meth 
single-stranded-DNA-specific exonuclease RecJ
Statistics
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PSSM-Id: 468665
Aligned: 18 rows
Threshold Bit Score: -1
Created: 24-Apr-2023
Updated: 4-May-2023
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_148215604       1 MIDEAET--VTVYSHTDCDGITAATILSKLLDGLGKEHEINIIN---INEVPEVEH-GPDLTVFSDLGSGQM--VHENMK 72  Methanother...
11_ncbifamImport   1 TLRKNRKnnILIYTHIDTDGITTRVILEELLNRLNIEAEFRFLKgigTNSIEDIPFkDYDLIIFGDLGSGQLdlIKGKME 80 
15_ncbifamImport   1 VLMKNKDgnILVYTHVDTDGITSRVILEELFSRLNIEGEFKFLKqlnMVTVESIPFkEYNLIIFADLGSGQInlINEKIK 80 
3_ncbifamImport    1 ILRKNRNnnILVYTHIDTDGITSRVILEELMNKLNINAEFRFLKqlgTDTINEIPFnDYDLIIFADLGSGQInlIKEKLK 80 
17_ncbifamImport   1 IVKNAED--VKIYSHIDCDGISSGAILSSTLDRLEIDHEIEFIS---LDMIPDLKK-ENELTIFSDLGSGQN--LDHFKT 72 
10_ncbifamImport   1 VLRKNRDknILICTHIDTDGINSRIILEKLMERLNIDAEFMFLRqidFKTIDTIPF-DYDVIIFADLGSGQLelIKEKMN 79 
7_ncbifamImport    1 LIKKSED--IKIYTHIDCDGVTAGAVLSSMLDKLGKDHEVEFIS---LDQMDDLVT-ENELTIFSDLGSGQE--MDKLCT 72 
13_ncbifamImport   1 MVKESED--VKIYSHIDCDGISAGAILSLTMDRLEIDHEIEFIN---LDQIPELEK-ENELTIFSDLGSGQK--LDNFQT 72 
9_ncbifamImport    1 MVEKAED--IKIYSHIDCDGITAGSLLSLMLDRLGKEHEIEFIS---LDKIDDLKT-TNELTIFSDLGSGQN--LDKFCT 72 
12_ncbifamImport   1 MVQNAED--IKIYSHIDCDGITAGAILSSMLDNLEKDHEVEFVT---LDKIDGLEL-ENELTIFSDLGSGQN--VDKLGN 72 
WP_148215604      73 RN-------SRVLILDHHPPVRKRnf-epPRGELLEINPIFYGMDGStSISGGGLSYLLARQFGYT--DLSWMGLLAAVG 142 Methanother...
11_ncbifamImport  81 EYnlldktdKNIIILDHHIPANIN-----IPKNIINVNPWNNNIDGGkEICGAGVSYLFAKMCNPRniDLAKYAVLGAVG 155
15_ncbifamImport  81 EYnlwnsrdHSIIILDHHIPAYSK-----IPDNIIHVNPWNNNLDGGrEICGAGVAYKFAKLCNPNytDLAKYAILGAVG 155
3_ncbifamImport   81 NEkt---kiPHIIILDHHITAKTQ-----IPENIINVNPWNNNIDGGkEICGAGVCYLFAKTCNPRytDLAKYAILGAVG 152
17_ncbifamImport  73 SE-------SRVLILDHHPPLRKVs----dEKGFLEVNPHYHGIDGSfEVSGGGMCYLLAKTFQFY--DLSWIGVLSAIG 139
10_ncbifamImport  80 EYglldrkdKYIIILDHHLIDDTK-----LPENIINVNPWNNNIDGGkEICGAGVCYLFAKICDPRytDLAKYAILGAVG 154
7_ncbifamImport   73 SN-------SKTLILDHHPPIRKLdn--yLNGQLIELNPHHHNIDGSyEVSGGGMTYLLARTFGYT--DLSWMGVLSAVG 141
13_ncbifamImport  73 SQ-------SKVLILDHHPPVRKIs---sGENGFLEINPNHHGIDGSfQVSGGGMCYLLAKTFGYH--DLSWIGVLSAVG 140
9_ncbifamImport   73 SS-------SKVLVLDHHPPLREMnh--yKKCEFLEINPHFYNMDGSyEISGGGMTYLLAKTFGFY--DLSWMGVLSAVG 141
12_ncbifamImport  73 GS-------SNVLILDHHPPLRPMgfdnhVSGQFLELNCHYYGIDGShDVSGGGMSYLLAHTFGFD--DLSWLGVLSAVG 143
WP_148215604     143 DMQNiRTGKMVGAN-RVILEDSIREGAVECCSDLTIYGRHTRSIVSALSYFGDVTLPTTNNTNECIARLKNLGIPl-KND 220 Methanother...
11_ncbifamImport 156 DIQN-LEGKLIGLN-RSILNDAVKSGEVVAFPDLQFYGKHTKPIFASIKYFTDVRTDLMNNDSRIINFINQINKKhdLDI 233
15_ncbifamImport 156 DIQN-LGGSFVGMN-REILEDAKARGDILEFPDLQFYGKHTRPMFVSIKYFTDVRTDLMNNDSKILNFVKTINRRynLEI 233
3_ncbifamImport  153 DVQN-LEGKLNGLN-ETILKDAIELGDIVAFPDLQFYGKHTKPLFASIKYFSDVRTDLLNNDSRIINFINNINRKhnLNI 230
17_ncbifamImport 140 DMQNnLSGKLVGVN-QEIVKDSVNRGMLESASDLAIYGRQTRPLFVALSYFGDVNLPITNNRNEAIQLLKKLDIPi-KNG 217
10_ncbifamImport 155 DIQN-LEGKLVGLNrEVILKDAIEAGDIVNFPDLQFYGKHTKPLFTSIKYFTDVRTDLMNNDSRIIDFINKINRKydTNI 233
7_ncbifamImport  142 DMQNsFSGKLIGLN-SSILQESIQQNLISSQNDLAIYGRQTRPLYIALSYFGDVNLPITNNKTECQMLLNKLDIPm-KNG 219
13_ncbifamImport 141 DMQNsLSGKLTGIN-AGILEDGVNKGLVGSVNDLAIYGRQTRPLFVALSYFGDVKLPITNNRNEAIQFLKNLDIPi-RNG 218
9_ncbifamImport  142 DMQNsLTGKLQGLN-QDILTDSVQNNFVESINDLSIYGRQTRPLFVALSYFGDVNLPITNNKTECILMLNKLGIPt-KNG 219
12_ncbifamImport 144 DMQNsMSGKLVGLN-KEILAASIQNKLIATNNDLSIYGRQTRPIFVALSYFGDVKLPITNSRTECIHMLNKLDIPt-KNG 221
WP_148215604     221 ETQRRLCDLTDDEKRKLFNEIYRMMVNEVPRRYHKYLPKLILGEVYELRSEERYTVFRDLSEFSTAVNACNRNSRWKLAM 300 Methanother...
11_ncbifamImport 234 IPKENLCELSFDEKRILGSEFLSKCNRYVPPNWARFLPKVIFGESYEFKKEEIKTPFRNLEEFSTCINACSRYEDYETPL 313
15_ncbifamImport 234 DPREPICNLSFEEKRVIGSEFLSRCNKYVPLSWIKYLPKVIFGMSYEFRGETVMTPLRNLEEFSTCINACSRYEDYVTPL 313
3_ncbifamImport  231 VAKESLCDLTFEEKRILGSEFLNKCNKYVPNSWAKFLPKVIFGNSYEFKQEEIKTPFRNLEEFSTCINACSRYGDYETPL 310
17_ncbifamImport 218 KKERTLYDLTIDEKRRLFNELVRMMSRAVPPRYVKYVPRLVSGDYYEFLREEKYSPLRDASEFSTAINACSRHKNPEIAL 297
10_ncbifamImport 234 LPKNYLCELTLDEKRMIGTEFLSKCNRHVPPKWIVYLPKVIFGESYELRSEEIKSPLRNLEEFSTCINSCSRYGEYETPL 313
7_ncbifamImport  220 RKYRSLCDLSVEEKGRLFSELVRMLSLEVPSRYVKYVPKLISGDSYEFLMEEKYSPLRDASEFSTAVNACGRHKHHKVAM 299
13_ncbifamImport 219 KKQRTLYDLSSAEKGRIFTELVRMMSREVPPRYVRYIPRLVAGDAYEFLKEEEYSPLRDASEFSTAINACSRHKNPNVAL 298
9_ncbifamImport  220 RKNRSLCDLSVEEKSTLFSELVRMLSREVPPKYVRYIPKLICGDSYEFLNEKKYSPLRDASEFSTAVNACSRHEHPEIAM 299
12_ncbifamImport 222 KRARVLCDLTQEEKGKIFSELVRMLSKEVPQRYIKHVPKLVAGESYDFLGEQKYSPLRDASEFSTAVNACSRHKHPEIAL 301
WP_148215604     301 DIIGGDRHEKLEELEGVLREHRAYLAVTLDRIMDEELIRDMDNLQYFHAPE--VKTAVVGTVAGMLLGYG--DWRRPMVG 376 Methanother...
11_ncbifamImport 314 KVLKGDRDKYYDKMKSRLNAHKRNLSKSLQYIKDNVEIIQRDKFQYFEVKNgaIEGNIIGIVAGMSYSIEdvDWKKPIFA 393
15_ncbifamImport 314 EVLKGDRGKYYSRMLYMLNRHKKNLFRALKYIKDNVEIVQRERFQYFEIEKnkVDEGIVGIVTGMSYSIEdvDWKKPIFA 393
3_ncbifamImport  311 QVLNGDRDKYYSKMITRLNNHKRNLSKSLQYIKDEVEIIQTSKFQYFEVEKgmIEGHIIGIVAGMSYSIEevDWKKPIFA 390
17_ncbifamImport 298 KVIKGDRSSSLDEMEELGKQHRSYLAQKMEWIQEEDRIKSLKNLQYFHGNG--IKSEVIGTIAGMILSYG--DWKKPMLG 373
10_ncbifamImport 314 QVLKGDRDKYYDKMKKMLRSHKRNISESLDYIKNEVEIIQRDKFQYFEVENnkIGGNIVGIIAGMSYSIEevDWKKPIFA 393
7_ncbifamImport  300 NVLKGDRGASLDEMEHLALEHRRYLAQKMEWIRGDERITPMNNLQYFEGSE--IKSEVIGTIAGMILSYG--DWKKPIVG 375
13_ncbifamImport 299 KVLKGDRGMALDEMEMQGKEHRQYLAQKMSWIQEEDRIIHLKNLQYFQGNG--IKSEVIGTIAGMILSYG--DWRKPMIG 374
9_ncbifamImport  300 RVLKGDRALALDDMDDLAREHKRYLAQKMDWVREEERIIPMNNIQYFNGSE--IKSNVIGTIAGMILSYG--DWKKPIIG 375
12_ncbifamImport 302 NVLKGDRSLALDEMDQLALEHRRYLAQKMEWVTEEDRIISLENLQYFEGSE--IKSEVIGTVAGMILSYG--DWRKPIIG 377
WP_148215604     377 l---aETGDGLKVSLRCSRLLAFDG-IHFGSTMQRVAEKVGGSGGGHATACGAYIPAenEGEFLRLLNRAI 443 Methanothermobacter ...
11_ncbifamImport 394 l---gELDNGYKVSARCPKLLSFAEdINLADAISYASKKVGGSGGGHKFACGAYIPE--KRDFIKYLENKL 459
15_ncbifamImport 394 i---kEKDNGYKVSGRCPKLLTFAAdINLADAISYASMKVGGTGGGHRFACGAYIPH--KKDFIKYIENRL 459
3_ncbifamImport  391 l---gELDNGYKVSARCPKLLSFAEdINLADAINYASKKMGGSGGGHKFACGAYIPE--KGDFIKHLECRV 456
17_ncbifamImport 374 ftsinEENDNLKVSLRCSRLLAFDG-INFGQMISKVASKVGGSGGGHSTACGAYIPLdkEEKFLEIFNESL 443
10_ncbifamImport 394 i---sEIDEGYKVSARCPKLISFAEdINLAEAIKYASKKVGGSGGGHKFACGSYIPK--KGDFIKYLEDIL 459
7_ncbifamImport  376 ftpigEEKEGIKVSLRCSRLLAYDG-IHFGNLIRKVAKKVGGNGGGHSVACGAYIPEgsTAKFLKIFDESL 445
13_ncbifamImport 375 fthtnDESGGLKVSLRCSRLLAFDG-IHFGHIINKVAAKVGGSGGGHSMACGAYIPGgkQDEFLKLFDETL 444
9_ncbifamImport  376 fteigDGKDGLKVSLRCSRLLAYNG-VHFGNLIRKVAEKVGGTGGGHSVACGAYIPEgsTEAFLNIFDESL 445
12_ncbifamImport 378 ftpvgEDSEGIKVSLRCSRLLAYDG-IHFGNIIRKVAAKVGGNGGGHSVACGAYIPEenMDKFLNVFDEYL 447
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