4DJH


Conserved Protein Domain Family
7tmA_Kappa_opioid_R

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cd15091: 7tmA_Kappa_opioid_R 
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opioid receptor subtype kappa, member of the class A family of seven-transmembrane G protein-coupled receptors
The kappa-opioid receptor binds the opioid peptide dynorphin as the primary endogenous ligand. The opioid receptor family is composed of four major subtypes: mu (MOP), delta (DOP), kappa (KOP) opioid receptors, and the nociceptin/orphanin FQ peptide receptor (NOP). They are distributed widely in the central nervous system and respond to classic alkaloid opiates, such as morphine and heroin, as well as to endogenous peptide ligands, which include dynorphins, enkephalins, endorphins, endomorphins, and nociceptin. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others.
Statistics
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PSSM-Id: 320219
Aligned: 5 rows
Threshold Bit Score: 479.45
Created: 15-Dec-2013
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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Conserved site includes 41 residues -Click on image for an interactive view with Cn3D
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of some class A family members with bound ligands (peptides or chemicals), agonists, or antagonists
  • Comment:Opioid receptors respond to classical opioid alkaloids such as morphine and heroin, as well as to endogenous peptide ligands like dynorphins, enkephalins, endorphins, endomorphins and nociceptin.
  • Comment:Small-molecule chemical ligands tend to bind deeper within the receptor core, compared to a peptide ligand neurotensin, which binds towards the extracellular surface of its receptor.
  • Structure:4DJH: Human kappa-opioid receptor in complex with antagonist JDTic, contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                               #  ##           ###### ##
4DJH_A        23 VIITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTaTNIYIFNLALADALVTTTMPFQSTVYLMNsWPFGdvlCKIVLSIDY 102
P41145        60 VIITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTaTNIYIFNLALADALVTTTMPFQSTVYLMNsWPFGdvlCKIVISIDY 139 human
XP_426087     61 IIITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTaTNIYIFNLAMADALVTTTMPFQSTEYLMNsWPFGdvlCKIVISIDY 140 chicken
XP_002934159  77 VIITAVYSMVFVVGLVGNALVMFVIIRYTKMKTaTNIYIFNLALADALVTTTMPFQSTSFLMNsWPFGdvlCKIVVSIDY 156 western clawed ...
XP_005798611  55 PIITAVYSVVFVVGLLGNCLVMYVIIRYTKMKTaTNIYIFNLALADALVTTTMPFQSTDYLLNtWPFGevvCKVFISIDY 134 southern platyfish
Feature 1          #                                            # #####                          
4DJH_A       103 YNMFTSIFTLTMMSVDRYIAVCHPvkALDFRtPLKAKIINICIWLLSSSVGISAIVlggtkvreDVDVIECSLQFPdddy 182
P41145       140 YNMFTSIFTLTMMSVDRYIAVCHPvkALDFRtPLKAKIINICIWLLSSSVGISAIVlggtkvreDVDVIECSLQFPdddy 219 human
XP_426087    141 YNMFTSIFTLTMMSVDRYIAVCHPvkALDFRtPLKAKIINICIWLLSSSVGISAIVlggtkvreDTGSTECSLQFPdrdy 220 chicken
XP_002934159 157 YNMFTSIFTLTMMSVDRYIAVCHPvkALDFRtPLKAKCINICIWMLSSSVGISAIVlgg--tkiSDGSTECALQFPth-y 233 western clawed ...
XP_005798611 135 YNMFTSIFTLTMMSVDRYVAVCHPvkALDFRtPIKAKMINVCIWILSSAAGIPAFVlgg--tqtNSDITECALQFPep-y 211 southern platyfish
Feature 1           #  ### ### ##                                                                
4DJH_A       183 sWWDLFMKICVFIFAFVIPVLIIIVCYTLMILRLKsvrllsgnifemlrideglrlkiykdtegyytigighlltkspsl 262
P41145       220 sWWDLFMKICVFIFAFVIPVLIIIVCYTLMILRLKsvrll---------------------------------------- 259 human
XP_426087    221 vWWDIFMKICVFVFAFVIPVLIIIVCYTLMILRLKsvrll---------------------------------------- 260 chicken
XP_002934159 234 wYWDTVMKMCVFIFAFIIPVFIITICYTLMILRLKsvrll---------------------------------------- 273 western clawed ...
XP_005798611 212 sYWDTMMKICVFVFAFVVPVLIITVCYTLMVLRLKsvrml---------------------------------------- 251 southern platyfish
Feature 1                                                                                        
4DJH_A       263 naakseldkaigrntngvitkdeaeklfnqdvdaavrgilrnaklkpvydsldavrraalinmvfqmgetgvagftnslr 342
P41145           --------------------------------------------------------------------------------     human
XP_426087        --------------------------------------------------------------------------------     chicken
XP_002934159     --------------------------------------------------------------------------------     western clawed ...
XP_005798611     --------------------------------------------------------------------------------     southern platyfish
Feature 1                                                                          #  ## ##  #   
4DJH_A       343 mlqqkrwdeaavnlaksrwynqtpnrakrvittfrtgtwdayreKDRNLRRITRLVLVVVAVFVVCWTPIHIFILVEALG 422
P41145       260 ---------------------------------------sgsreKDRNLRRITRLVLVVVAVFVVCWTPIHIFILVEALG 300 human
XP_426087    261 ---------------------------------------sgsreKDRNLRRITRLVLVVVAVFIICWTPIHIFVLVEALG 301 chicken
XP_002934159 274 ---------------------------------------sgsreKDRNLRRITRLVLVVVAVFIVCWTPIHIFVLVEALV 314 western clawed ...
XP_005798611 252 ---------------------------------------sgsreKDRNLRRITRLVVVVVAVFVVCWTPIHIFILVKALV 292 southern platyfish
Feature 1               ## ###  #  ##                     
4DJH_A       423 stshstaALSSYYFCIALGYTNSSLNPILYAFLDeNFKRCF 463
P41145       301 stshstaALSSYYFCIALGYTNSSLNPILYAFLDeNFKRCF 341 human
XP_426087    302 dvshstaAVSSYYFCIALGYTNSSLNPILYAFLDeNFKRCF 342 chicken
XP_002934159 315 dvpqsiaVVSIYYFCIALGYTNSSLNPILYAFLDeNFKRCF 355 western clawed frog
XP_005798611 293 svpettaIMAAYFFCVALGYTNSSLNPILYAFLDeNFKRCF 333 southern platyfish

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