Conserved Protein Domain Family
FH_FOXG

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cd20021: FH_FOXG 
Forkhead (FH) domain found in the Forkhead box protein G (FOXG) subfamily
The FOXG subfamily includes a winged helix transcription factor FOXG1, which is also called brain factor 1 (BF-1), brain factor 2 (BF-2), Forkhead box protein G1A, Forkhead box protein G1B, Forkhead box protein G1C, Forkhead-related protein FKHL1, Forkhead-related protein FKHL2, or Forkhead-related protein FKHL3. FOXG1 acts as a transcription repression factor which plays an important role in the establishment of the regional subdivision of the developing brain and in the development of the telencephalon. It is repetitively used in the sequential events of telencephalic development to control multi-steps of brain circuit formation ranging from cell cycle control to neuronal differentiation in a clade- and species-specific manner. Individuals with mutations in FOXG1 harbor "FOXG1-related encephalopathy", characterized by two clinical phenotypes/syndromes including microcephaly, developmental delay, severe cognitive disabilities, early-onset dyskinesia and hyperkinetic movements, stereotypies, epilepsy, and cerebral malformation for those with deletions or intragenic mutations of FOXG1. The FH domain is a winged helix DNA-binding domain. FOX transcription factors recognize the core sequence 5'-(A/C)AA(C/T)A-3'.
Statistics
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PSSM-Id: 410795
Aligned: 22 rows
Threshold Bit Score: 171.209
Created: 17-Dec-2018
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
putative DNA
Feature 1:putative DNA binding site [nucleic acid binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #                 ##  #                  ## ##  #      #         ### #    
P55316       181 KPPFSYNALIMMAIRQSPeKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDP 259 human
Q8ITI5        27 KPLFSYNALIAMAISQSPlKKLTLSEIYDFIIETFPYYRDNKKGWQNSIRHNLSLNKCFVKVPRHYNDPGKGNYWMLNP 105 sea walnut
ABB89477      63 KPPFSYNALIMMAIRSSPeKRLTLNGIYEYIMTNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDP 141 purple sea urchin
AEZ03828     126 KPPFSYNALIMMAIRSSPeKRLTLNGIYEFIMTNFPYYRDNKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDP 204 Terebratalia tra...
EFX71322       8 KPPFSYNALIMMAIRSSAeKRLTLNGIYEFIMKNFPYYRDNKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDP 86  common water flea
XP_022799069  71 KPPFSYNALIMMAIRGSPeKRLTLSGIYDFIMKNFPYYRNNKQGWQNSIRHNLSLNKCFVKIPRHYDDPGKGNYWMLDP 149 Stylophora pisti...
BAQ19216     109 KPPFSYNALIMMAIRGSPeKRLTLSQIYEFIMKNFPYYKDNKQGWQNSIRHNLSLNKCFLKVPRHYDDPGKGNYWMLDP 187 owl limpet
NP_508644     93 KPPFSYNALIMMAIKDSPeKRLTLAGIYEYIVTNYPFYRDNKQGWQNSIRHNLSLNKCFVKVPRNFDDPGKGNYWMLDA 171 Caenorhabditis e...
XP_003387169 109 KPPFSYNALIVMAIRSSPeRKLTLSGIYDYIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRPYDDPGKGNYWTLDP 187 Amphimedon queen...
BAE06438      97 KPPYSYNALIMMAIKKSPrKRLTLSQIYQYITTTFPYYKENKQAWQNSIRHNLSSNKCFVKVPRHYDDPGKGNYWMLDS 175 vase tunicate

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