Conserved Protein Domain Family
HTH_34

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pfam13601: HTH_34 
Winged helix DNA-binding domain
Statistics
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PSSM-Id: 463932
Aligned: 18 rows
Threshold Bit Score: 87.3096
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q2FR95           23 VRLELFWSLSDlgDDGATARQLKSALNLNDGAIYSNLKKLEILGYLKCELVLFEGKELELWSMTLEGLEEWKKVKKWLCR 102 Methanospiri...
jgilanl:CHU2579  16 LRLGIMSILIT--NDWIEFNTLKELLEATDGNLASHITALEKINYLEVRKAFIGKKPNTSFRITKEGRKAFKDHIDALEQ 93 
WP_004313179     16 VRLGIMAILMV--NEEADFNFLKEQLSLTDGNLASHTRALEELGYIVCNKSFVGRKPRTVFQATPQGREAFKSHIEALEK 93  Bacteroides
jgi:Tcur_0081    16 VRFAVMATLAA--ADRAEFAFVRDTVEITDSALSKQVSTLEKAGYVKVTKGYVGKRPRTWLSLTPAGRSAFASHCAALRE 93 
WP_012948676     17 VRFSLLAGLAQ--ADELEFRFLRDTLQISDSLLSRQASTLEQAGYIAIRKGHVGKWPRTWLKLTPEGRAAFNDHLNTLRE 94  Geodermatoph...
wustl:BV0443     13 LRLAVMSILVS--VEEAEFSYLKQQTGATAGNLSVQIDKLNKAGYVEVIKTFKGKMPCTICKITLKGLEAFEEYVDALKS 90 
CDE65082         13 LRLAVMSILLG--VEEADFVFIREQTGASAGNLSVQIDKLQKAGYITVEKTFRGKIPRTLCRITPTGVDAFEEYVEALKS 90 
Q7MSY5            4 LRLAIMSVLMS--VEEADFLYLKEVTGATSGNISVQLDKLSTAGYIEIEKGYNGKRPRTTCRATDAGREAFSAHFEALKS 81  Porphyromona...
WP_009419679     13 LRLAIVSLLVS--EEKADFARIKEITKATSGNISVQIQKLETAGYITVKKSFKDNYPNTEVQLTKEGLLAFERYVEALKS 90  Capnocytophaga
jgi:Astex_1922   18 LRLGIMAYLST--AGSADFTTLKAKTQSTDGNLSVQVRKLEEANYVTVDKAFVGKKPVTTITLTEAGRAAFVDYLDAMRR 95 
Q2FR95          103 LL 104 Methanospirillum hungatei JF-1
jgilanl:CHU2579  94 LI 95 
WP_004313179     94 FL 95  Bacteroides
jgi:Tcur_0081    94 IV 95 
WP_012948676     95 IV 96  Geodermatophilus obscurus
wustl:BV0443     91 YI 92 
CDE65082         91 YI 92 
Q7MSY5           82 YL 83  Porphyromonas gingivalis
WP_009419679     91 YI 92  Capnocytophaga
jgi:Astex_1922   96 LI 97 
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