5FIM,1E0G,4A1K


Conserved Protein Domain Family
LysM
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pfam01476: LysM 
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LysM domain
The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
Links
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Statistics
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PSSM-Id: 396179
Aligned: 155 rows
Threshold Bit Score: 32.3679
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
5FIM_A   99 YTVKSGDTLSAISKQVygnaNLY-NKIFEANkpMLKSPDkIYPGQVLRIP 147  Escherichia coli
O84764  138 VIVKKGDFLERIARSN----HTTvSALMQLN--DLSSTQ-LQIGQVLRVP 180  Chlamydia trachomatis
Q9Z704  124 VVVKKGDFLERIARAN----HTTvAKLMQIN--DLTTTQ-LKIGQVIKVP 166  Chlamydia pneumoniae
Q93ZH0  178 YVVKEIDTLVGIARRY----STTiTDLMNVN--AMGAPD-VSSGDILAVP 220  thale cress
Q94298  187 ATVTPGSSCYTISASY----GLN---LAELQt-TYNCDA-LQVDDTICVS 227  Caenorhabditis elegans
O16237  711 ATITPGNTCFNISVAY----GIN---LTDLQk-TYDCKA-LEVGDTICVS 751  Caenorhabditis elegans
Q94298  118 IHVKEGDTCYTIWTSQ----HLTeKQFMDMNe-ELNCGM-LEIGNEVCVD 161  Caenorhabditis elegans
O16237  208 LKIKEGDTCYNIWTSQ----KISeQEFMELNk-GLDCDK-LEIGKEVCVT 251  Caenorhabditis elegans
O16237  271 YRFKKGDTCYKIWTSH----KMSeKQFRALNr-GIDCDR-LVPGKELCVG 314  Caenorhabditis elegans
O16237  548 TEVKEGDTCFKIWSAH----KITeQQFMEMNr-GLDCNR-LEVGKEVCIV 591  Caenorhabditis elegans
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