Conserved Protein Domain Family
Proton_antipo_C
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pfam01010: Proton_antipo_C 
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus
This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Links
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Statistics
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PSSM-Id: 366417
Aligned: 77 rows
Threshold Bit Score: 116.943
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
A2T379       448 RMYFVTFEGDFRGNLSYKDT------DKSVS-Y-----KSIWGnlQTLSERdkVFSN--------Ns------yTSFSDP 501 Angiopteris evecta
Q95AW9       436 RIYLLTFEGYLYVHLKNVSGi-----PNSSL-Ys----ISLWG--KKAPKS--IPNNlll-------------lrTNRNE 488 wapato
Q716V9       439 RMYLLTFEGHLHVHLKNYSGi-----RNNSF-Ys----ISLWG--KETNKW--VKINlpl-------------svTNSNE 491 Triglochin mari...
Q95AW8       457 RVYLLTFEGYLHVHFQNYSGt-----QNSSF-Ys----ISLWG--KEAPKA--VNINllf---stT--------TMNNNE 511 Spathiphyllum w...
Q716T4       431 RMYLLTFDGYLHVHCQNYSGt-----INSSL-Ys----ISLWG--KEAPNA--INRDflf--sarNne----isKINNNE 490 Triantha glutinosa
A6H5N8       448 RMYFLAFEGDLRVNLYN---------DPIPF-Ys----ISMWG--E--KESgtFTETemgs-mpqLp------gNKNSSS 502 Cycas taitungensis
AGC26839     448 RIYLLTFEGDFRANASIGTV------TDAPLps----rHSLYV-----GNLtkDSGNvihtvpqfV--------QDEAVP 504
Q6YXQ6       448 RIYFLTFEGDLRVNL-----------NKVAFtYp----VSIWG--E--LNLnkKNSNknkfvlnkYdiffetdqNENQTD 508 Physcomitrium p...
Q859V1       448 RIYFLTFEGEFRANSFK---------ENTPV-Ss----VSLWG--E--FRFeeFGEKkad---svLq------iVEKSSP 500 Anthoceros angu...
WP_006198066 448 RMYFMTFEGKFRGTDEKIKAklkkaaAPMVVeLdsaalAPNFGpgA--MKQgeLAANa---------------------- 503 Nodularia spumi...

A2T379       502 TGDFYEipeNvfSLPerRI-KNkSLNIEksFnvlSdFkgSdNrnEIseDAfvSInrEIrneniLYPNESDNSMLFSLISL 580 Angiopteris evecta
Q95AW9       489 EVSFFS---R--NRY--KAdGG-GISKM--W---H-F--S-T--HF--GK--KP--TP-----IYPLESDNTMLFPMLVL 538 wapato
Q716V9       492 KFSFFS---K--KIY--KFdEN-RINQM--Q---Y-F--R-P--DF--AK--KY--TF-----MYPHESDNTMVFPLLVL 541 Triglochin mari...
Q95AW8       512 SVYFFS---K--NTY--QFdGN-VINRM--R---Y-F--T-T--RF--LK--KY--TS-----MYPHESDNTMLFPLLVL 561 Spathiphyllum w...
Q716T4       491 KVSFFS---K--NIY--KVnGN-LRNQI--R---Y-F--S-T--HF--RK--KY--SY-----MYPHESDNTMLFPLLVL 540 Triantha glutinosa
A6H5N8       503 SEGVFQfsgKmeQFD-----GK-PMEYL------V---------IT--HP--LDkgDP-----PYPKESDNTMLLPSLVL 552 Cycas taitungensis
AGC26839     505 NKSF----------------GN-VRNPS--------------------SS------SPpkrnlRFPEESDFLMILPLVLL 541
Q6YXQ6       509 NLSFFS-----------------DIKKL-----------------------------------KYPKESDNKMLFPLLVL 536 Physcomitrium p...
Q859V1       501 KEFFRFvqsNreSSE-----TQ-IGNYL------S---------AY--PS--KEpiHF-----LYPKESDYTMLIPLLIL 550 Anthoceros angu...
WP_006198066 504 -------------------------------------------------------hDShehhsDTPHESPWTMTLPLALL 528 Nodularia spumi...

A2T379       581 AIPTLFIGFIGVPFSHkgINSDLLSDLLAPLTD----SFHKDNSE--NLVDFFLKSIPSVSIALVGVSISFFIYGPVSSR 654 Angiopteris evecta
Q95AW9       539 VLFTLFVGFIGVPFDQriIDLDLLSKWLTPTKN----FFHTNSHSlgDWYEFLTNAISSVSIAFFGISIASLFYGSIYSS 614 wapato
Q716V9       542 LLFTLFIGSLGIPFNQegMDLDLLSKWLTPPDN----LFDKNSHYsvDWYEFLINAIYSVSIAYFGISIAYIFYGSVYSS 617 Triglochin mari...
Q95AW8       562 VVFTLFVGFIGIAFDQgeMDLDLLSKWLAPSKN----ILHPNSDYsmDWYEFLTNAFFSVSIAFFGIFVASIFYGSAYSS 637 Spathiphyllum w...
Q716T4       541 VLFTLFVGSIGIPFNQgiRDLDLLSKWLTPSKS----LFYSNSNYsvDWYEFVTNAIFSLSIANFGIFIASIFYGSVYSS 616 Triantha glutinosa
A6H5N8       553 GLFTLFVGSIGVSFVQgeISSDILSQRLTLSMN----HFHENHPE--NWSEFFVDAIPSVGIAFSSTFVAFVLYGPINFN 626 Cycas taitungensis
AGC26839     542 AIPTLFIGSLGAPFLRegFSSNLPFNWLDPILV----YSIKTNSE--DWLDLVLDSVPSIAVASLGILISLTLYGP--TS 613
Q6YXQ6       537 TLPTLFIGFLGAPFPEgqIGSDLLSQWLYPVFK----SAEEITSG--NWLEFGLNAINSLSVVFSGIFIAFILYGP--FS 608 Physcomitrium p...
Q859V1       551 SIPTLLIGFIGAPLPNgqLGSDLLSHWLNSFGN----LSPERLSE--NWLEFIEDAITSISIASFGIFSAFILYGP--AS 622 Anthoceros angu...
WP_006198066 529 AIPSMLIGLVGTPYA------NYFEEFIFPPSEtlteVLEKAAEF--NPTEFYVMAGASVGISLIGITLASLMYLR--RK 598 Nodularia spumi...

A2T379       655 ----DLRKEIDP-----KtKDFLGYFFNSLSNWSYYRGYIDNLYNVIFIEGTRILSKSICFFD 708 Angiopteris evecta
Q95AW9       615 fksfHLINSFGKmc--sK-RIVLDPTINVIYNWSYNRGYIDLFYTRLFTRNIRELSQLTSFFD 674 wapato
Q716V9       618 fqnlDLINSFVKkg--sK-RILWDPIINVIYDWSYNRGYVDFLYEKGLIKNIRGLSQFIHFFD 677 Triglochin maritima
Q95AW8       638 fqnlDLINSFVKigigpK-RVFFDQIVNIVYNWSYNRGYIDFFYTRVVTRGIKGLAKLTHFFD 699 Spathiphyllum wallisii
Q716T4       617 fknlDLINSFLKmg--pG-RILLDPIVNVIYNWSYNRGYIDFFYTMFLTKSIRELARLTNFFD 676 Triantha glutinosa
A6H5N8       627 fsspYLWYKRDS-----RlKGIPDRFINVIYNWSYYRGYIDIYYNKIFTMGIRRLAELTYLFD 684 Cycas taitungensis
AGC26839     614 slprDLREGIDP-----EaTGTLGSLLDSIYNWSYYRGYIDGLYNLTFVRGMRTLAKTIYSFD 671
Q6YXQ6       609 lfpqNLEKNIEF-----SlEKNLNSFFSFIYNWSYFRGYIDVYYNIVFVKGTRLLAQSLSFFD 666 Physcomitrium patens
Q859V1       623 ifprDLEKKIEP-----QlKGVWGFFINYMYNWSQYRGYIDQYYNKIFVEGTRILAYASSFFD 680 Anthoceros angustus
WP_006198066 599 idpaAIASQI-------K-----PLYDLSLNKW-----YFDDIYHRVFVLGLRRLARQVMEVD 644 Nodularia spumigena
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