Conserved Protein Domain Family
nucleoid_noc

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TIGR04285: nucleoid_noc 
nucleoid occlusion protein
This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.
Statistics
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PSSM-Id: 275105
Aligned: 43 rows
Threshold Bit Score: 337.948
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_08784236   28 EVIQLPVNQIQPNRYQPRTVFNEEKIEELAKTINTHGIIQPIVVRKiDNDK-YEIIAGERRWRAVQSLGWENVSAIIRDM 106 Ornithinibacill...
ZP_03734600   20 QIQYIAIANIRPNPYQPRKNIEEEKIYELAQSIKTYGLLQPVIARK-SATG-YELVAGHRRLLACKKLGWAEVPAIVREL 97  Dethiobacter al...
ZP_08623589   28 QVQQVAVSQISPNPFQPRKTFLDESLQELAASIHEFGIIQPLIVRQ-TDHG-IELIAGERRLRASKLAGLTEVPVIFKTI 105 Acetonema longu...
WP_013276991   8 EVINIPVDAIKPNPYQPRKNFDDESLRELTDSIKVYGVLQPIVVRRvGKNL-YELIAGERRWRACQKAGLKEIPAIVRDT 86  Thermosediminib...
WP_013782481  23 lILKIPIDAIRPNPYQPRKEFDMASLDELAQSIKQYGLLQPITVRR-MGTSsYELIAGERRLRACKMINLTEIPAIVLDA 101 Mahella austral...
WP_012269837   8 EICYLPIDSIRPNPYQPRKNFDIKNLQELAESIKAYGVLQPITVRMvYNNF-YELVAGERRLRASKLAGLAEIPAIIINA 86  Thermoanaerobacter
WP_013779650  10 sVVNIPLEEIQPNIYQPRKDFNDESLDELTNSIKSYGVLQPIVVRRnSRGG-YEIIAGERRWRACKKAGLKEIPAIIKDA 88  Tepidanaerobact...
WP_003429292   5 RVMEIPIEDVVPNPYQPRKIFSQVSLEELSNSIKVYGIIQPITVRA-KDGK-YELIAGERRLRAAKLAELKTIPAIINNM 82  [Clostridium] d...
WP_015924066  16 gVIMIPVDKIEPNPYQPRKDFKEEDLNELADSIKSYGVIQPITVRV-KDDG-YELIAGERRLRASRYLGLNEIPAVIKEL 93  Halothermothrix...
WP_011641936  17 KVTGIPVEKLYPNPFQPRKDFDEREMMELAQSIEAYGIIQPIIVRT-RDDG-FQIIAGERRFRACCLLGIREIPAIIQEM 94  Syntrophomonas ...
ZP_08784236  107 NDTQTASVALIENLQREELTVIEEAVAYAKLLELQGLTQEALAQRLGKNQSTIANKLRLLKLPEQVQEALLRKDITERHA 186 Ornithinibacill...
ZP_03734600   98 SNSAMATVALIENLQRENLSFLEEAQGYESLIREFKLTQEVLAQRLGKSQSTIANKLRILKLPREVKEKLQIQELTERHA 177 Dethiobacter al...
ZP_08623589  106 NDREMAELAMIENLQREDLHYLEEAEGYQTLISQFGLTQEEMARRVGKNQSTIANKLRLLKLDADVRQSLRQNELTERHA 185 Acetonema longu...
WP_013276991  87 KETDTAIIALIENLQRENLSFLEEAEGYRQLMYEHGLTQEQLAERLGKSQSTIANKVRLLKMPEDILKVISRENLTERHA 166 Thermosediminib...
WP_013782481 102 LEEDSAMLAMIENLQRENLNFIEEAEGYYSLLKDHNMTQEELAARIGKNQSTIANKLRLLKLPVEVKRMIVENNLTERHA 181 Mahella austral...
WP_012269837  87 QDEDSAVLALIENLQRENLNFIEEAEAYYNLINDHHLTQEQLARILGKSQSTIANKLRILKLSKEIKEQLLENDLTERHA 166 Thermoanaerobacter
WP_013779650  89 KDADTAILALMENIQREDLNFLEEAEGYRQLIQECGVTQEQLAMKLGKSQSTIANKMRILKLSPEIINIISQEKLTERHA 168 Tepidanaerobact...
WP_003429292  83 NDESSAVLALLENLQREDLNFIEEAIGYENLIKEHAFTQQQLAEKLGKNQSTVANKLRILKLPNDIKMKLIENNLTERHA 162 [Clostridium] d...
WP_015924066  94 TDREMAEIALVENLQRKDLNFMEEARAYQKLLEQFKLTQKELAQRLGKSQSTIANKLRLLSLSNDVQEQINSPLITERHA 173 Halothermothrix...
WP_011641936  95 DDERVATISLIENLQRRELNYFEEANAYNRLINGFGLTQEELARKIGKSQAAIANKIRLLKLPLSVQSLILPERISERHA 174 Syntrophomonas ...
ZP_08784236  187 RALIKLKDEALQLKLLQEILEHELNVKQTEERIENL---Nn-----aKDKP--KRKKPVLKG-V-NKDIRIAMNTIRQSL 254 Ornithinibacill...
ZP_03734600  178 RALLKLPGEEDQLKILQEVCNLRYTVQQTEKRVADY---Ls------NLEP--TAVKERKKV-I-IRDIRIFLNTVRQAV 244 Dethiobacter al...
ZP_08623589  186 RALLKLDNTSAQMEILEVVKEKGLNVRETEKFIEQV---Leda-areEEEK--SQPKQHIIK-V-IKDVRIFINTINNVV 257 Acetonema longu...
WP_013276991 167 RALLKLPDEKLQREVLNKVVEKGLNVRQTEELVDKT---Le-----kIQAKtdTKRKKTLKI-A-IKDIRIFVNSVKKLV 236 Thermosediminib...
WP_013782481 182 RALLRLPDPDLQIDALKQVIDKGLNVKKTEELVDRM---VdklcqpqPQNI--SLHKGRMIR-A-YKDIRLFINSLKQLI 254 Mahella austral...
WP_012269837 167 RALLRLPDEELQKKALEIIIKKKLNVSQTEKLIQDM---Idki-tkqPEQV--KKENKKMMK-F-YKDIRIFVNTVKQAV 238 Thermoanaerobacter
WP_013779650 169 RSLLKLPDKELQMQVLNQVVSRGLSVRQTEELIEQT---Ie-----kINDD--KKNKSKSFK-IaIKDVRIFVNSVRKLV 237 Tepidanaerobact...
WP_003429292 163 RAFLKLPSEDLMQSVLDKVIKNELTVKKTEKLIQDV---Lee----tKVQE--EPDKKQNIK-G-AMSIRIYINTIKQAF 231 [Clostridium] d...
WP_015924066 174 RALLKLDNKEQQIKVIEEIKDKKLTVKQTEQMVNKL---L---------DN--KNRKAKVVT-V-YKDLRIFTNSLKKTI 237 Halothermothrix...
WP_011641936 175 RALLKLNSAEMQLEVVKQIYEKELTVKETEELVEGIsrnNi-----pQEIG--RKPKGQSVSmV-IRDARIFLNTIRETV 246 Syntrophomonas ...
ZP_08784236  255 SMVSDTGIDIESDEQDLDDYYQITIKIPK 283 Ornithinibacillus scapharcae TW25
ZP_03734600  245 SILEAGGLNARLQENDLGDSIEVTIRLPK 273 Dethiobacter alkaliphilus AHT 1
ZP_08623589  258 TEMKKTGLNIKMDQNQDNESIIIQLRIPK 286 Acetonema longum DSM 6540
WP_013276991 237 NTIKETGFKVDYQEFDRGDYIEMVVQIPK 265 Thermosediminibacter oceani
WP_013782481 255 GSISDSGLNVTYDQQEKDDVVEITICIAK 283 Mahella australiensis
WP_012269837 239 DLMKKSGVPAEYIENDKEEYIEFVIKISK 267 Thermoanaerobacter
WP_013779650 238 KAIKETGVNAEYKEVDKGEYIELMVQIPK 266 Tepidanaerobacter acetatoxydans
WP_003429292 232 DAISNTGIDAKYNEIDKGDYMEVVVKIPK 260 [Clostridium] difficile
WP_015924066 238 NEMKSAGLEVKVDKEESDDFIEFKIRLPK 266 Halothermothrix orenii
WP_011641936 247 KRARQTGIDIVMVEKDVDSEYEITIRIGK 275 Syntrophomonas wolfei
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