Conserved Protein Domain Family
RsmI

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COG0313: RsmI (this model, PSSM-Id:223390 is obsolete and has been replaced by 440082)
16S rRNA C1402 (ribose-2'-O) methylase RsmI [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 223390
Aligned: 53 rows
Threshold Bit Score: 217.458
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15805663  26 ESTDGSrVWLVPTPVGNLGD---LTLRALEVLR-GADAVACEDTRRTGALLSHLDIRRP-------LVRLDAHTMHRAAQ 94  Deinococcus radiodu...
15618297   1 --MT---LYLLPNTLGTRAVe-tLPSVIGELVH-RLDGLIVESDRGGRAFLSLWKIPEVhkf-plaILSKHARLPKAWDF 72  Chlamydophila pneum...
15604767   1 --MA---LYLLPNTLGSKRSe-dLPFSVGEIVRnKIQGLIVESDRGGRLFLSLWKVEEPhrf-plaVMSKNDTSVKACDF 73  Chlamydia trachomatis
19552116   7 SLPTG--IIIAATPLGNIGD---ASPRLVHALA-NATVVAAEDTRRTASLAAALGVEIKg-----qLVSNFDHNEQARVG 75  Corynebacterium glu...
15827002   1 -MTYGR-LLLGATPLGQPLD---ASRRLTDALC-CADVVAAEDTRRARTLAKTLGVVITg-----rVISLFDQIEAVRVS 69  Mycobacterium leprae
15840431   1 -MSSGR-LLLGATPLGQPSD---ASPRLAAALA-TADVVAAEDTRRVRKLAKALDIRIGg-----rVVSLFDRVEALRVT 69  Mycobacterium tuber...
15793541   4 GMMSPV-LYLIPTPLGTPDTpclLPHEQQAIVG--LTDFVVEAEKTARAHLKHLGVTMPirelnlqTLNEH-TDLKTLLE 79  Neisseria meningiti...
15677739   4 GMMSPV-LYLIPTPLGTPDTpclLPHEQQAIVG--LTDFVVEAEKTARAHLKHLGVTTPirelnlqTLNEH-TDLKTLPE 79  Neisseria meningiti...
2811037    1 -MSSGR-LLLGATPLGQPSD---ASPRLAAALA-TADVVAAEDTRRVRKLAKALDIRIGg-----rVVSLFDRVEALRVT 69  Mycobacterium tuber...
2829612    1 ---MGI-LYLVATPIGNLGD---MTPRAVETLQ-TVDLIAAEDTRHTGKLLQHFQITTP-------QISYHDHNRHGRTQ 65  Synechocystis sp. P...
15805663  95 VLEKYPR----LAYVSDAGTPGISDPGAELVQAAVAQDIPVEVLPGATAFVPALVLSGLPTARFTFEGFLPRSGRERKER 170 Deinococcus radiodu...
15618297  73 YLEPIVKhgenWGLISDAGLPCIADPGASLVRRARALGIPVQAFSGPCSITLALMLSGLPSQSFTFLGYLPQSPKERVKS 152 Chlamydophila pneum...
15604767  74 YLEPILKkqesWGVISDAGLPCIADPGAKLVRRARTLGIPVHAVSGPCSITQALMLSGLPGQNFTFHGYLPQNPKERSRY 153 Chlamydia trachomatis
19552116  76 KLIEAARtg-tVLVVSDAGMPVVSDPGFALIDAAHDANIPVTCFPGPSAVPTALALSGLHVGRFAFDGFAPRKQGARTTW 154 Corynebacterium glu...
15827002  70 ALVAEIEagatVLVISDAGMSVISDPGYRLVAACIAAGLPVRCLPGPSAVMTALAVSGLSSEKFCFEGFAPRKSSARRTW 149 Mycobacterium leprae
15840431  70 ALLDAINngatVLVVSDAGTPVISDPGYRLVAACIDAGVSVTCLPGPSAVTTALVISGLPAEKFCFEGFAPRKGAARRAW 149 Mycobacterium tuber...
15793541  80 LLKPLQEgr-sMGIVSEAGCPAVADPGANLVALAHKHGFEVRPLVGPSSLLLALMASGANGQSFAFKGYLPSEKNERIQS 158 Neisseria meningiti...
15677739  80 LLKPLQEgr-sMGIVSEAGCPAVADPGANLVALAHKHGFEVRPLVGPSSLLLALMASGANGQSFAFKGYLPSEKNERIQA 158 Neisseria meningiti...
2811037   70 ALLDAINngatVLVVSDAGTPVISDPGYRLVAACIDAGVSVTCLPGPSAVTTALVMSGLPAEKFCFEGFAPRKGAARRAW 149 Mycobacterium tuber...
2829612   66 ELLAKLQagqnIALVSDAGTPGISDPGQELVAACGEANIEVIPIPGATALIAALISSGLATDRFVFEGFLSTKNRPRQQL 145 Synechocystis sp. P...
15805663 171 LAALAARAET----TILYESPHRLHATLLDLAASCGEGRPASVTRELSKRFEETRRG--PLSELAPHFAEG----VRGEI 240 Deinococcus radiodu...
15618297 153 IKK-AATSKEvs-tSVCIETSYRNVYTFESLLDTLPSYAELCVASDLSGPSELVLTRqvQSWRTTEDLGSVkqsiTKVPT 230 Chlamydophila pneum...
15604767 154 LR--SCSGKSh--tQICIETPYRNPYTFDALLDQLPDHGELCVAIDLMGDQEYVSMRsiAVWNQSSDIEEVcerlKKVPA 229 Chlamydia trachomatis
19552116 155 LESLKTEKRA----VCFFESPHRIAETLAHAAEVLG-ERRVAVCRELSKTYEQVKRG--TLPELAEWAQDg----VRGEI 223 Corynebacterium glu...
15827002 150 LASLADERRT----CVFFESPRRLAACLRDAVDQLGSARPVVVCRELTKVHEEVVRG--SLDELATWAANg----VLGEI 219 Mycobacterium leprae
15840431 150 LAELAEERRT----CVFFESPRRLAACLNDAVEQLGGARPAAICRELTKVHEEVVRG--SLDELAIWAAGg----VLGEI 219 Mycobacterium tuber...
15793541 159 LKALEQRSRQqnetQLFIETPYRNDVLLADAVENLHSETRLCTATDLTLPTQEIISQtvVQWRKRKEMpn----lKKRPT 234 Neisseria meningiti...
15677739 159 FRALEQRSRQcgetQIFIETPYRNDALLADAVENLHPETRLCTATDLTLPTQEIISQtiVQWRKRKEMpn----lKKRPT 234 Neisseria meningiti...
2811037  150 LAELAEERRT----CVFFESPRRLAACLNDAVEQLGGARPAAICRELTKVHEEVVRG--SLDELAIWAAGg----VLGEI 219 Mycobacterium tuber...
2829612  146 LQSLAQEERT----IILYEAPHRLLATLTDLQTFLGQERSLTVARELTKYHEQFWRG--TLQTAIAYFTEn---tPKGEF 216 Synechocystis sp. P...
15805663 241 VVVVGGRSDEEaqagapdfsalaaqlaAEGLSVRDLRARLMAAgMRKNEAYALALQAGGpvASPTPLPDAATMSG 315 Deinococcus radiodurans
15618297 231 IFLFHIPN------------------------------------------------------------------- 238 Chlamydophila pneumoniae...
15604767 230 IFLF-ITSF------------------------------------------------------------------ 237 Chlamydia trachomatis
19552116 224 TVVIEGAGdi----------------aADVDSLIDAAQQRVDSgERLKAVCADLAKIHg--VSKNELYDAVISAR 280 Corynebacterium glutamic...
15827002 220 TVVLAGAtp-----------------rADLFLLVPEVENLVAGgARVKDACGQVAAVHSs-VRSRQLYDAVLRAR 276 Mycobacterium leprae
15840431 220 TVVVAGAap-----------------hAELSSLIAQVEEFVAAgIRVKDACSEVAAAHPg-VRTRQLYDAVLQSR 276 Mycobacterium tuberculos...
15793541 235 IFVMYAG-------------------------------------------------------------------- 241 Neisseria meningitidis Z...
15677739 235 IFVMYAG-------------------------------------------------------------------- 241 Neisseria meningitidis MC58
2811037  220 TVVVAGAap-----------------hAELSSLIAQVEEFVAAgIRVKDACSEVAAAHPg-VRTRQLYDAVLQSR 276 Mycobacterium tuberculosis
2829612  217 CLVIAGATPEDrp------------sfSEENLRDELRSLMAKG-LTRSQASRQLAEETK--LPRRQLYQLSLELE 276 Synechocystis sp. PCC 6803
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