1HNU


Conserved Protein Domain Family
CaiD

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COG1024: CaiD (this model, PSSM-Id:223955 is obsolete and has been replaced by 440647)
Click on image for an interactive view with Cn3D
Enoyl-CoA hydratase/carnithine racemase [Lipid transport and metabolism]
linked to 3D-structure
Statistics
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PSSM-Id: 223955
Aligned: 245 rows
Threshold Bit Score: 83.6044
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1HNU_A     5 IRQNEKISYRIEGP--------FFIIHLINPDNL----NALEGEDYIYLGELLELADRN-----RDVYFTIIQSSG-RFF 66  baker's yeast
17988211   1 --------------------mrCGDQHFRRALWP----DGDKLGLIPATISPYVVARIG-----EANALRTFTSARlFDA 51  Brucella melitensis
15892761   1 -------------------------MIFVITIKM----NCLNHEVFYLLQEAASKAENDgk--------nLYIYPQgNNF 43  Rickettsia conorii
15604414 426 KKDFLQESKIVLSNdsanlihyCENLVFVITTKM----NSLNHNVFYLLQEAVSKAENYgk--------nLYIYPQgNNF 493 Rickettsia prowazekii
15610510     --------------------------------------------------------------------------------     Mycobacterium tuber...
13541194   6 VRGYRDISFWQEDG--------IGLIVIKSDVNG-----IISRNCLDEMVSALGLASMD-----PNVKCVAFTGIN-KVF 66  Thermoplasma volcanium
16082237  11 VRGYKSISFWQEEG--------IGLIVIRSDSHG-----RFDLNTLGEITAAIGIAAMD-----GSVRAVALTGMN-NIF 71  Thermoplasma acidop...
15837717  10 PICESSIRIIEETHr------dVYWIYMHTHLAKtmggAYFSLKLIDDIMNYQSALRQRlnkqaPPLPFIVLASDN-KVF 82  Xylella fastidiosa ...
6324754    1 --MSSRVCYHINGP--------FFIIKLIDPKHL----NSLTFEDFVYIALLLHKANDI-----DSVLFTVLQSSG-KYF 60  baker's yeast
15606408 283 FKTYREILYEEEDG--------IGFIHFNFYNG------AMSTEQCYRLLETIKYAKKR------PVKAIVLLGSE-DFF 341 Aquifex aeolicus
1HNU_A    67 SSGADFKGIAKaqgDDTNKYPSetskwvsNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSIn-DKVY 145 baker's yeast
17988211  52 EEGRRIGLLH------DVVEAEr------LDAAVEAEIKPYFSTAPAAVAASKRLVHALGASIDEAVIDMTLTR--LADT 117 Brucella melitensis
15892761  44 SAGADLKLLLSy--IEDKNFHDl-----eNLLKLGQQTMLHLKYSSVHVISLWSWCGTWRWI------------------ 98  Rickettsia conorii
15604414 494 SAGADLKLILSy--IQDGNFHNl-----eNLLKLGQQTMRYLKYSSVHIISCARGVALGGGCELLLNSSYIVAN--QELN 564 Rickettsia prowazekii
15610510   1 -------------------------------MVQKVVAPQDLAAATAKLVGQVCRQSAVTMRAAKVVANMHGRAltGADT 49  Mycobacterium tuber...
13541194  67 AKGMKPDG-------DDGRSLY-------ELMQSSSSFLSMVYSLPKPIFSILNGDATNEGYEIALSSDLIISA--EDAN 130 Thermoplasma volcanium
16082237  72 GRQLVIGQ-------LSNNTVY-------NVMQSSSSLISMIYTFEKPIFSILNGDAIDEGYEIALLADRIISA--DDIK 135 Thermoplasma acidop...
15837717  83 NLGGDLQLFCDlirCKDREALLdy----aCRCVRGAYAFHTGLNANVHSIALVQGNALGGGFEAALCCHTIVAE--EGVM 156 Xylella fastidiosa ...
6324754   61 SSGGKFSAVNKlndGDVTSEVEkvsklvsAISSPNIFVANAFAIHKKVLVCCLNGPAIGLSASLVALCDIVYSQn-DSVF 139 baker's yeast
15606408 342 SNGMNLNTIEN----AESPADEsw----rNINAIDDVCEEILKTPDKLTVAGMQGNAGAGGVFLALTCDLVFAR--EGVV 411 Aquifex aeolicus
1HNU_A   146 LLYPFANLGLITEG-GTTVSLPLKFGTNTTYE----------------CLMFNKPFKYDIMCENGFISKNFNMPs--SNA 206 baker's yeast
17988211 118 WETPEAAEGIAA-----FLRNEHQHGREGTKS------------------LNQKAAGRGENGDFRVPERSVLNVh--EHR 172 Brucella melitensis
15892761     --------------------------------------------------------------------------------     Rickettsia conorii
15604414 565 AGLIELGVGLIPGWtGVTEMFARSNGNKTKLIrnikniieqnktssadYFKADYGIKNMQVNMNKHYILDDALKlriSKK 644 Rickettsia prowazekii
15610510  50 DALIRFGVEAYEGAdLREGVAAFSQGRPPKFDd----------------------------------------------- 82  Mycobacterium tuber...
13541194 131 VGFNQEY------------Q-TILGGSFTAAR-----------------FPLLAISKAQEAKNVDIVFKADS-------L 173 Thermoplasma volcanium
16082237 136 VGFSRDY------------E-FKIGGSFTSLR-----------------MTKTDISGPAEGINVDRVVKHES-------L 178 Thermoplasma acidop...
15837717 157 MGFPEVLFDLFPGm-GAYSFMRQRISPKLAER----------------LMLEGNLYSSEELLAIGLIDKVVPRG----KG 215 Xylella fastidiosa ...
6324754  140 LLFPFSNLGFVAEV-GTSVTLTQKLGINSANE----------------HMIFSTPVLFKELIGT-IITKNYQL----TNT 197 baker's yeast
15606408 412 LNPHYKNIGNLYGSeFWTYTLPKRVGWEKGKE----------------VMENRMPISSKKAFEIGLIDGVFGKTp--KEF 473 Aquifex aeolicus
1HNU_A   207 EAFNAKVLEELREk-------------VKGLYLPSCLGMKKLLKSNhIDAFNKANSVEVNEslkYWVDGEPLKRFRQLGS 273 baker's yeast
17988211 173 NAEKRHLQTGMAAf-------------GTDSLTLGGADFRCSCGYLaLAIESRKCILITS-------------------- 219 Brucella melitensis
15892761     --------------------------------------------------------------------------------     Rickettsia conorii
15604414 645 IVSIPNKITLPKInivseidtskynelQNKVLNKFQNIIDKHNEISeAELLTYEREMFLELaktPQTIEKLQAIVG---- 720 Rickettsia prowazekii
15610510     --------------------------------------------------------------------------------     Mycobacterium tuber...
13541194 174 LEDAKNYILKN----------------FGNRMVQARRQKMYDISNKiLLEKVWAYETYLMR-----STERSR-------- 224 Thermoplasma volcanium
16082237 179 LEDAKNIIKET----------------ADINFPMRRRQRYRYISELiNAEKINFYEHYLAR-----S------------- 224 Thermoplasma acidop...
15837717 216 IEAVEQIIRDSRR--------------TQYTWAAMQQVKRIADEVSlDEMIRITELWVDSAlqlGSKSLRTMERLIRAQQ 281 Xylella fastidiosa ...
6324754  198 ETFNEKVLQDIKQn-------------LEGLYPKSVLGMKELLHSEmKQKLIKAQAMETNGtlpFWASGEPFKRFKQLQE 264 baker's yeast
15606408 474 RQRLKERIKNFIN--------------SKDFYEFIEKKKKERTSGEwLEEIQKCREHELEKmklNFYGFDTSYHIARYYF 539 Aquifex aeolicus
1HNU_A   274 kqRKHRL 280 baker's yeast
17988211     -------     Brucella melitensis
15892761     -------     Rickettsia conorii
15604414     -------     Rickettsia prowazekii
15610510     -------     Mycobacterium tuberculosis H37Rv
13541194     -------     Thermoplasma volcanium
16082237     -------     Thermoplasma acidophilum
15837717 282 thKNTAL 288 Xylella fastidiosa 9a5c
6324754  265 gnRRHKL 271 baker's yeast
15606408 540 vrRKPHF 546 Aquifex aeolicus
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