6SBZ


Conserved Protein Domain Family
Clathrin_lg_ch

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pfam01086: Clathrin_lg_ch (this model, PSSM-Id:395863 is obsolete and has been replaced by 460056)
Clathrin light chain
Statistics
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PSSM-Id: 395863
Aligned: 84 rows
Threshold Bit Score: 121.953
Created: 22-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6SBZ_D         1 MADdFG-FFSSS--ESGAPev---aEEDPAAAFLAQQESEIA--------------------------------GIENDE 42 
4_pfamImport   1 MADlFDgDF-MEpaAQTTTtt---vEEDPAAAFLAQQEDEIAglesevlgtnepvvngfddapptngmddffnpPENTEP 76 
XP_003470921   3 ELDpFGa---PAg-SALGNgv--agEEDPAAAFLAQQESEIAgie--------------------------------ndE 44  domestic guinea...
XP_003223384   3 dFDiFAaSQ-P----AAGNgslggsEEDPAAAFLAQQENEIAgie--------------------------------ndE 45  green anole
Q5ZHR7         3 NLEfFGaQQ-PP--ATAGNgatdgaEEDPAAAFLAQQENEIAgie--------------------------------ndE 47  chicken
XP_002598367   1 MADgLGdFE------D--QpaqqqqEEDPAAAFLAREQDELAgiedd--------------------------------- 39  Florida lancelet
XP_796327      3 DMAeFDdLQ-A----PAAEnpppatEEDPAAAFLAREQDELAgie---------------------------------dd 44  purple sea urchin
EKC40452       1 MSE-FDaFD------S--EppaqntEEDPAAAFLAREQSELAgledd-----------------------nvpqDNGGGE 48  Pacific oyster
EFX72973      33 TMDaFGdDF---------TgvsevaDVDPAAEFLAREHDQLAgledlipevsq----------pehvetiqddfMTENAF 93  common water flea
TRY85750       1 -mDdFDmLSAp----qGSAgngvgtDEDPAAAFLAQQESEIAg--------------------------------iENDE 43  Danionella tran...
6SBZ_D        43 GFg-----A--PAGSqaalaqpgpasgagpedmgtt-----------------vngdvfqdangpadgyaaiaqADrltq 98 
4_pfamImport  77 EPvvn-ggFeyGGEVeteqimdpsmaya----------------------------------aiaaadarieelRA---- 117
XP_003470921  45 AFaild--ggaPGPQphgeppggpdavdgvmngey-------------------yqesngptdsyaavsqvdrlQS---- 99  domestic guinea...
XP_003223384  46 GYnile--ngeVPPGmqgqeglaadsidgvtngdl-------------------yqesngptdcyaaisqadrlQT---- 100 green anole
Q5ZHR7        48 GYgile--sgdVPEAlqaadgfdsgavdgvmngvv-------------------yqesngptdcyaaisqvdrlQS---- 102 chicken
XP_002598367  40 ----dvagSqeETPAapaqvpsamddnldflsggggdsgsgaadwegeqqngdifgadqggpqsngpvptpaprRE---- 111 Florida lancelet
XP_796327     45 DFgigsdpAqtVPDAtpatqqqddldplagmgggmgggmds--------etpaddlqtngpsdlysaissadnrAN---- 112 purple sea urchin
EKC40452      49 QFdmfddgEpqmmngapdfmgenqfees----------------------------qsngpsdaysaissvdkeRA---- 96  Pacific oyster
EFX72973      94 EVqasevavnyeldafsevevdngls-------------------------nqltgmglkengysapqmtssipRE---- 144 common water flea
TRY85750      44 GFsi--ldSgdVPSSfshdqdggamngdlhge-------------------------sngpsdvyaaissvdrlQA---- 92  Danionella tran...
6SBZ_D        99 EPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRiadkafyqq------pdadiigy 172
4_pfamImport 118 EPEKIRIWREEHIKLIAEKDRESERRQQEWLAQARKELEDWDRNRLELVEKTKESNRrsneaflkq-------hdealgh 190
XP_003470921 100 EPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQLQKTKANNR----------------------- 156 domestic guinea...
XP_003223384 101 EPESIRKWREEQQERLEVLDANSRKQEAEWKEKAIKELEEWYERQDEQLEKTKVNNR----------------------- 157 green anole
Q5ZHR7       103 EPESIRKWREEQKERLEQLDANSRKQEAEWKEKAIKELEEWYARQDEKLQKTKASNR----------------------- 159 chicken
XP_002598367 112 EPEKIRKWREEQKAMLEKKDAEAERLREEWKKEAADELRKWYAQREEQLEKTKASNRvankellkqleddalathtrrsr 191 Florida lancelet
XP_796327    113 EPEKIRLWREEQKEILEKKDEEADELEVEWKVSAKKEISDWYARRDEQGVKAKASNR----------------------- 169 purple sea urchin
EKC40452      97 EPEKLRIWREEQKMRLEKKDAEEAQKKEAWREAAKKELDDWYKHHNEQVQKTRETNR----------------------- 153 Pacific oyster
EFX72973     145 EPEKIRKWREEQKLRLEKKDEEEERKKQEMKEAARKELEDWYKHHKETIEKTRSANRea--------------------a 204 common water flea
TRY85750      93 EPESLRKWREEQRERLEQLDANSRKQEAEWKEKAKLELEEWHTRQNEQLEKTKVNNR----------------------- 149 Danionella tran...
6SBZ_D       173 vASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSkQCKDVSRLRSVLMSLKQT 225
4_pfamImport 191 tTAEEQFLKERDQATPGSEWERVSKLCEFNPKSSkSTKDVSRMRSSLLHLKQN 243
XP_003470921 157 -AAEEAFVNDIDESSPGTEWERVARLCDFNPKSSkQAKDVSRMRSVLISLKQA 208 domestic guinea pig
XP_003223384 158 -AAEEAFVNDVDESSPGTEWERVARLCDFNPKSSkQAKDVSRMRSVLISLKQA 209 green anole
Q5ZHR7       160 -AAEEAFVSDAEDVFPGTEWERVAQLCDFNPKSSkQAKDVSRMRSVLISLKQA 211 chicken
XP_002598367 192 tSAEEAFREEVAESNPGQEWERVARMCDFNPKSSkGSKDTGRMRSILLHLKQE 244 Florida lancelet
XP_796327    170 -AAEEAFIQERDEITPGQEWERIARLCDFNPKNNkNLKDITRFRSILLHLKQS 221 purple sea urchin
EKC40452     154 -TAEEAFKKDRDTTQPGGEWEKICRICEFNPKNSkNTKDVSRLRSILLQLKQT 205 Pacific oyster
EFX72973     205 iTAEKELIGTPTEMEPGQEWERIAKLCDFNPKASrNSKDVSRMRSIILQLKQN 257 common water flea
TRY85750     150 -AAEEAMVSELDENSPGTEWERVARLCDFNPKSSkQAKDVSRMRSVLISLKQA 201 Danionella translucida
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