Conserved Protein Domain Family
AtoC

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COG2204: AtoC (this model, PSSM-Id:225114 is obsolete and has been replaced by 441806)
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains [Signal transduction mechanisms]
Statistics
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PSSM-Id: 225114
Aligned: 89 rows
Threshold Bit Score: 301.923
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
17547526  16 VVREPILVVDDEADLRELLEISLRRMGHDVVLAGGLAEAREALTRQrFALVLTDMRLG--DGLGIDLVRQLSATA-DRTP 92  Ralstonia solanacearum
15888773   1 -MASDILVVDDEADIREIVAGILSDEGHETRMAFDSDSALAAISERvPRLIFLDIWMQgsKLDGLALLDEIKSRh-PEIP 78  Agrobacterium tumef...
17987151   1 -MAADILVVDDEVDIRDLVAGILSDEGHETRTAFDADSALAAINDRaPRLVFLDIWLQgsRLDGLALLDEIKKQh-PELP 78  Brucella melitensis
16125987   1 -MSADVLVVDDEADIRDLVAGILEDEGYAVRTAADSDQALAAIRARkPALLVLDIWMQggGMDGLELLDMVKALd-ADLP 78  Caulobacter crescen...
15793186   1 MRSSDILIVDDEIGIRDLLSEILQDEGYSVALAENAEEARKLRHQArPAMVLLDIWMP--DCDGITLLKEWAKNGqLNMP 78  Neisseria meningiti...
15676043   1 MRSSDILIVDDEIGIRDLLSEILQDEGYSVALAENAEEARKLRHQArPAMVLLDIWMP--DCDGITLLKEWAKNGqLNMP 78  Neisseria meningiti...
15892772   1 MSQLDVLIVDDEESIRNLIAANLKDEGFNPKVAANSTQALKILSEKpVSAVVLDIWLQgsEIDGLGILEIIKKRy-PLMP 79  Rickettsia conorii
15604416   1 MSQLDVLIVDDEESIRNLIAANLKDEGFNPKIAANSTQALKIISEKpVSAVILDIWLQgsEIDGLGVLEIIKKRy-PLMP 79  Rickettsia prowazekii
15965214   1 -MAADILVVDDEEDIREIVSGILSDEGHETRTAFDSESALAAINDRvPRLIFLDIWMQgsKLDGLALLDEIKNRh-PDLP 78  Sinorhizobium meliloti
13470634   1 -MASDILIVDDEEDIRELVAGILSDEGHETRTAFDADSALAAIADRaPRLIFLDIWLQgsRLDGLALLDEIKTMh-PTLP 78  Mesorhizobium loti
17547526  93 VAVITAYGSAENAVEALKAGAFDYIAKPLSLDQLRSLVLNALGRQQRDPDPGSADLAERTSALLPGHSAAMQEVRRSLLR 172 Ralstonia solanacearum
15888773  79 VVMISGHGNIETAVNAIKRGAFDFIEKPFKADRLILIAERALENSKLKREVQELKKRTGDAVELVGASLAVSQLRQTIDR 158 Agrobacterium tumef...
17987151  79 VVMISGHGNIETAVSAIRRGAYDFIEKPFKADRLILVAERALETSKLKREVSDLRKRTGDQLELVGTSLAMNQLRQTIER 158 Brucella melitensis
16125987  79 VIMISGHGNIETAVSAIKRGAYEFLEKPFKSDRLLLIVERALEAAGLRRENRRLRAQTLSPDGLIGKSAPAQALRQLILK 158 Caulobacter crescen...
15793186  79 VVMMSGHASIDTAVEATKIGALDFLEKPISLQKLLSAVENALKYGAAQTE-------TGPVFDKLGNSAAIQEMNREVGA 151 Neisseria meningiti...
15676043  79 VVMMSGHASIDTAVEATKIGAIDFLEKPISLQKLLSAVENALKYGAAQTE-------TGPVFDKLGNSAAIQEMNREVGA 151 Neisseria meningiti...
15892772  80 VIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLVILLTRACEVTKLKRENIDLKSKVIDKTELVGECSVTLKYKMAIAK 159 Rickettsia conorii
15604416  80 VIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLIILLKRACEVTKLKRENIDLKSKVIDKTELVGGCPVTLKYKMEIEK 159 Rickettsia prowazekii
15965214  79 VVMISGHGNIETAVSAIKRGAYDFIEKPFKADRLILIAERALENSKLKRENSELRRKSGDPVELIGTSVAVSQLRQMIEK 158 Sinorhizobium meliloti
13470634  79 VVMISGHGNIETAVSAIRRGAYDFIEKPFKADRLILIAERALETSKLRREVSDLKQRSGETFDLIGMSSAMSQLRQTIER 158 Mesorhizobium loti
17547526 173 LARSMAPVVISGESGSGKERAARAIHALSSRSARPFVAVNCGAIPENLMEAEFFGYVKGafTGADSDRQGFFQAAHGGTL 252 Ralstonia solanacearum
15888773 159 VAPTNSRIMILGPSGSGKELVARMVHKKSSRATGPFVALNAATITPDRMEIALFG-TEG--LPGQPRKVGALEEAHRGVL 235 Agrobacterium tumef...
17987151 159 VAPTNSRIMITGPSGAGKELVARAIHAQSSRANGPFVTVNAATITPERMEIELFG-TE---MDGGERKVGALEEAHGGIL 234 Brucella melitensis
16125987 159 VAPANSRVLVSGPPGAGKELVARLIHGASTRARQEFVAVSAAGMAPERLDVELFG-EEG--EGGRPRKIGVFERAHGGTL 235 Caulobacter crescen...
15793186 152 AVKCASPVLLTGEAGSPFETVARYFHKNGT-----------PWVSPARVEYLINMPME------------LLQKAEGGVL 208 Neisseria meningiti...
15676043 152 AVKCASPVLLTGEAGSPFETVARYFHKNGT-----------PWVSPARVEYLIDMPME------------LLQKAEGGVL 208 Neisseria meningiti...
15892772 160 AATSSCRIMIHGKVGSGKELAARLIHKQSKRVNNPFIIFSPTCMTTEKINQELFGELEK--QANN-KRPTILEFANNGTL 236 Rickettsia conorii
15604416 160 AASSSSRIMIHGKVGSGKELAARLIHKQSKRVNNPFIIFSPTCMTTEKINQELFGESEK--QENNNKRPTILEFANNGTL 237 Rickettsia prowazekii
15965214 159 VAPTNSRIMIQGPSGSGKELVARMIHRKSARANGPFVALNAAAITPDRMEIALFG-TEG--TTGQPRRTGALEEAHGGIL 235 Sinorhizobium meliloti
13470634 159 VAPTNSRVMIIGPSGSGKELAARAIHTLSARKGAPFVTLSAANITPERMEIELFG-TE---SNGVERKVGALEEAHRGIL 234 Mesorhizobium loti
17547526 253 MLDEVADLPLTMQVKLLRALQERRVRKIGESREDPVDVRVVCASHQNLARLVAAGRFREDLFYRLNVLELRMPTLRERAE 332 Ralstonia solanacearum
15888773 236 YLDEVGEMPRETQNKILRVLVDQQFERVGGGKRVKVDVRIISSTAHHLESLIAEGQFREDLYHRLAVVPVKVPALSERRE 315 Agrobacterium tumef...
17987151 235 YLDEVADMPRETQNKILRVLVDQQFERVGGTKRVKVDVRIISSTAQNLEGMIAEGTFREDLFHRLSVVPVQVPALAARRE 314 Brucella melitensis
16125987 236 YLDEVADMPRETQGRILRVLVEQRFRRVGGDNDVQVDVRVISSSSRDLRDEIAAGRFREDLFHRLNVVPVRVPGLAERRE 315 Caulobacter crescen...
15793186 209 YVGDIAQYSRNIQAGIAFIVGKAEHRRVRV---------VASGSRAAGSDGIA---CEEKLAELLSESVVRIPPLRMQHE 276 Neisseria meningiti...
15676043 209 YVGDIAQYSRNIQAGIAFIVGKAEHRRVRV---------VASGSRAAGSDGIA---CEEKLAELLSESVVRIPPLRMQHE 276 Neisseria meningiti...
15892772 237 YIDEVSNIPIPIQVKLLKFLKDQTITKPCG-KNIKIDIKIITGTSKNIQDEVNNGKFLEDLYYRLNVSSLKVPSLYERKE 315 Rickettsia conorii
15604416 238 YIDEISNIPIPIQVKLLKFLKDQTITKPCG-KKTKVDIKIITSTAKNIQDEVNNGKFLEDLYYRLNVFSLKVPSLYERKE 316 Rickettsia prowazekii
15965214 236 YLDEVGEMPRETQNKILRVLVDQQFERVGGSKRVKVDVRIISSTAYNLENMITEGLFREDLYHRLAVIPVRVPALAERRE 315 Sinorhizobium meliloti
13470634 235 YIDEVADMPRETQNKILRVLVEQQFERVGGTKRVKVDVRIISSTSQNLEAMIADGRFREDLYHRLAVVPVMVPGLAERRE 314 Mesorhizobium loti
17547526 333 DVPVLAGVLLEQLAARYGdLRPKRLTRQALQQLCAYPFPGNVRELDNLLERAYAFAEGESIDVDHLGALgtdiersplfh 412 Ralstonia solanacearum
15888773 316 DIPFLVDMFMRQISEQAG-IRPRKIGDDAMAVLQTHDWPGNIRQLRNNIERLMILARPEGGEA-PISAD----------- 382 Agrobacterium tumef...
17987151 315 DIPSLVEFFMKQIAEQAG-IKPRKIGPDAMAVLQAHSWPGNLRQLRNNVERLMILTRGDDPDE-LVTAD----------- 381 Brucella melitensis
16125987 316 DIPELINYFVERISEATG-LARRRLGEDALATLQVQAWPGNVRQLRNNVERMLILASGEPGD--VITAE----------- 381 Caulobacter crescen...
15793186 277 DIPFLIQGITCNVAESQK-IAPASFSEDALAALTRYEWPGNFDQLSSVVATLLLEADGQEIGA-GAVSS----------- 343 Neisseria meningiti...
15676043 277 DIPFLIQGIACNVAESQK-IAPASFSEEALAALTRYDWPGNFDQLQSVVATLLLEADGQEIGA-GAVSS----------- 343 Neisseria meningiti...
15892772 316 DIPLLVKYFVKQLSKFSG-LKERSFADETIAALQSYEWPGNIRQLRNVVEWTLIMNPLTTGNNEIIKPY----------- 383 Rickettsia conorii
15604416 317 DIPLLVKYFVKQLSKFSG-LKERHFSDEAIAALQSYEWPGNIRQLRNVVEWTLIMNPLTTGNNEIIKPY----------- 384 Rickettsia prowazekii
15965214 316 DIPFLVDMFMRQVSEQAG-IRPRKIGEDALAVLQAHDWPGNIRQLRNNIERLMILARSDGPDT-PITAD----------- 382 Sinorhizobium meliloti
13470634 315 DIPYLVDNFMKQIARQAG-IKPRRIGDDALAVLQAHNWPGNVRQLRNNVERLMILARGDDVDA-PITAD----------- 381 Mesorhizobium loti
17547526 413 rarEAhgghPVHPAHLPPVPAPgHPAhpGHPGHVAHPLGVPQPVGGWPDAAYIPVPVPMGLMPHPVVVPVPVEPAPVIEP 492 Ralstonia solanacearum
15888773 383 ---MLpsdiGDMLPKISAQGDQ-HIMt-LPLREAREMFERDYLMAQINRFGGNISRTAEFVGMERSALHRKLKSLGV--- 454 Agrobacterium tumef...
17987151 382 ---LLpaeiGDTLPRAPTESDQ-HIMa-LPLREARERFEKEYLIAQINRFGGNISRTAEFVGMERSALHRKLKSLGV--- 453 Brucella melitensis
16125987 382 ---MLsgaeQPSAGNAGAIGAE-RIIa-LPLREARELFEREYLNAQILRFGGNISRTANFIGMERSALHRKLKSLGVSG- 455 Caulobacter crescen...
15793186 344 ---LLgqnvPAEGAEDMVGGFN---Fn-LPLRELREEVERRYFEYHIAQEGQNMSKVAQKVGLERTHLYRKLKQLGIGVS 416 Neisseria meningiti...
15676043 344 ---LLgqnvPAEGAEDMVGGFN---Fn-LPLRELREEVERRYFEYHIAQEGQNMSQVAQKVGLERTHLYRKLKQLGIGVS 416 Neisseria meningiti...
15892772 384 ---MIpseiLANSANLTKLEDSfDMLs-MPLREAREVFERQYLSAQMSRFNNNISKTSSFVGMERSALHRKLKLLSLHIP 459 Rickettsia conorii
15604416 385 ---MIpseiLANSANLTKLEDSfDMLs-MPLREAREVFERQYLSAQMSRFNNNISKTSSFVGMERSALHRKLKLLSLHIP 460 Rickettsia prowazekii
15965214 383 ---MLpnevGDTLPKISAQGDQ-HIMt-LPLREAREMFERDYLIAQINRFGGNISRTAEFVGMERSALHRKLKSLGV--- 454 Sinorhizobium meliloti
13470634 382 ---LLpseiGDVMPRTPNQSDQ-HIMa-LPLREAREQFEKDYLIAQINRFGGNISKTAEFIGMERSALHRKLKSLGV--- 453 Mesorhizobium loti
17547526 493 AAPAM 497 Ralstonia solanacearum
15888773     -----     Agrobacterium tumefaciens str. C58 (Cereon)
17987151     -----     Brucella melitensis
16125987 456 --ARG 458 Caulobacter crescentus CB15
15793186 417 ---RR 418 Neisseria meningitidis Z2491
15676043 417 ---RR 418 Neisseria meningitidis MC58
15892772 460 PTNRI 464 Rickettsia conorii
15604416 461 PTNRI 465 Rickettsia prowazekii
15965214     -----     Sinorhizobium meliloti
13470634     -----     Mesorhizobium loti
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