Conserved Protein Domain Family
RocR

?
COG3829: RocR 
RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains [Transcription, Signal transduction mechanisms]
Statistics
?
PSSM-Id: 443041
Aligned: 557 rows
Threshold Bit Score: 374.107
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_069975938 184 KIEI----ERKEkYETINSI------LNCTSEGIVGIERDGQIIHINEIAKKIL--NYKEQ-----RNIKEVL--P-Ss- 242
WP_012696323   1 ---Mk---EIDWfARNLGEA------LNTLDQAITIVDKAGRFVYYNRASARMD--GQDADki-lgRHVLEIN--P-Wlt 62 
WP_038517044   1 MTIDp---ELLQsLEIFKHF------FDLIHQPMAIIDKEGKYIYYNRESAELD--GYPMEqa-igKPMLKVY--P-Nlr 65 
WP_082636011 318 aaaaaydvslhmymgdnlhsmylpdnrgmfsvnINVTNGKCHILYHNANIFDTF--KIPYEnl-yyQKVEQLL--D-Plp 391
WP_065535369   2 qtlhisrqELHTrgGVLDRM------LDSLFDTAILVDTDCRILYISAS-S-FPdpS-QRAav-vgQHISVL---D-Qls 67 
WP_014006665   1 --MDt---ELASaLAIFSQL------FDAMPQPVAIIDSEGNYVYYNQESAKID--AYPAEra-vgHPLLDIY--P-Amd 63 
WP_014128081 102 gtcflikkediQ-KKLMAAA------LDASPDIIQLYTKSGGISFFNQTSRRFL--GIPLEdsvegQALLDVF--SlDpd 170
NP_249887     10 STRSg---ELAWlVDCLAPI------FDGLRQPVTVVDPSGRFVYYNRASGLLD--GLDPQra-lgMHLLQSA--P-Wla 74 
WP_111739223   1 -----------MsVIAMKYWasicliFSLPFMPMTM-----KCL--RRCSTERN---------------------P-Sit 40 
WP_083273766  73 DENTvylsREGVlMDLYEQT------IRHVAEGIQIYDRNGYFLYANPASEDLE--FYKNEdf-kgKHILDLYdlK-Eey 142
WP_069975938 243 ----lLIDTANTGRE--Nfs-eLLNVg--gQSIVINSVPIK-VED-KTIGAVA--TIQEENKIQS---IDREIRK----- 301
WP_012696323  63 eedstLLRCIRDGVRfvDsyqaYSGTggekLHYLHSAIPLYgQKG-DLIGAIE--IGKMLTAAPA---HLGH-------- 128
WP_038517044  66 kedstMLQALQQGKEyqDnyqsYYNHvgklVDYMHTTVPLYnKHK-DIIGAIE--IGRNLSTVRQ---LQDQVFKlns-- 137
WP_082636011 392 s-nqdFWSILKEGKTvfEkq-lTLSVhgreSTYLVTTEPYHqSYL-GFKGIRF--FIAAPSQISS---NVSRR------- 456
WP_065535369  68 ----pFEEVLRTGQPrpDl---FLELh--gRPCISSLFPVLd--GeRVIGVVGtiTVRNLGRLKK---VLSQLSDqaagf 133
WP_014006665  64 aesstLLQALHHGKRytGafqaFINAqgrlVQQIHTTLPLLnRRG-AVVGAVE--IARDLAAAGS---DDGASAIapn-- 135
WP_014128081 171 y--ssVFTALKSENPvhHrydsYKSTtgkeLMTVVEAEPVFdEKG-SLIGAFS--VERDMKSVKTqlqVLHEVEAilmr- 244
NP_249887     75 aeqstLLRCLAEGRPsiDtlqaYVGAggelLQYRHRAIPLRgRDG-CLLGAME--LGEVVAETEE---AAG--------- 139
WP_111739223  41 k-------------------ksYYTPsgklIDYQHTTVPLFnSSG-AIMGVIE--SGQDLSRFRK---LQRHLSVlne-- 93 
WP_083273766 143 ---stILTVLRTQKPviNrcdrFKMKtgkaLTTINNGYPLK-IDD-ILYGAVV--FESDLSALKR---IKNRTINleayv 212
WP_069975938 302 ----KHLG-SGHVAKKTFNDIIGRSRAIDIVKKRAARYAESDSTILIIGETGTGKEVFAQSIHNYSNR---KR------Q 367
WP_012696323 129 --------------HAAPPDIVGEHPALLAQITAVDRFARSMLPVLIQGETGTGKELFARRAHAMSPR---AG------Q 185
WP_038517044 138 --------klYQNKDQPLPEIVFVSQKMQKVIDQTNILGANDVPVLIVGETGTGKELFAHLIHQTSHR---RN------N 200
WP_082636011 457 ---------IGNNAMKTFDDIVGDSPQIISALRLARGIARSDSNTLLLGESGVGKDIFAQAIHNASAR---RD------K 518
WP_065535369 134 rglyQDLA-R-VDSGYRLEDFVGESPRVADLLDKARKAAHSGESVLILGETGTGKEIIASGIHAE--RhggRP------L 203
WP_014006665 136 --------kqEACRHG----IVSQDPAMQVLIRQAEALGKAGVNVLLCGETGTGKELFARLLHQSSQR---AGapspslS 200
WP_014128081 245 -hltEDFTvK-SDAHYTFDDFIGSSSVLRETLRLAQKMALRDMNILIEGETGTGKEILAQSIHQYSSR---KK------E 313
NP_249887    140 --------------LADCPNILSVAPSLLRQLQRLDVFAATDLPLLIHGETGTGKELFARRAHALSPR---RS------G 196
WP_111739223  94 --------klFSKEKGEQPEIIHNSDAMQQVLDGAARLAASNVPVMVIGETGTGKELLANFVHNHSPR---HH------K 156
WP_083273766 213 ---egrqP-ATQEQLYAFDDIIHVSDKMKNMIHFAKKVSLTDSSVIIVGATGTGKELMAQSIHSFSPR---RD------K 279
WP_069975938 368 PFVAINCAALPENILESELFGYVKGAFTGARNEGKAGIFELAHMGTVFLDEISEVSTDVQVKLLRVIQEKEVSRIGDDKV 447
WP_012696323 186 PMLCLNCAAIPENLLESTLFGTTRGAFTGAEN--KKGLFALAHGGTLFLDELNSMPMALQSKLLRVLQDGTYLPLGAERP 263
WP_038517044 201 AFISLNCSALPTTLIESTLFGTVKGAFTGAEN--HPGYLELANGGTLFLDELNAMPLDMQSKLLRFLQEKTYWPLGGNKE 278
WP_082636011 519 PFIVLNCAAFPRDLIASELFGYEQGAFTGAKRNGNIGKFELANTGTIFLDEIGEMPLDLQATLLRVIEQKAFMRLGGSTV 598
WP_065535369 204 PYVTINCTAIPEQLLESELFGHEKGAFTGATE-ARMGKFQLAGDGDILLDEIGDMDLQMQSKLLRVLESREFERVGGREI 282
WP_014006665 201 PFVVLNCAAIPETLFESTLFGTARGAFTGAQE--RQGLIETANSGTLFLDELNSLPWSVQGKLLRVLQDGMFSRVGSNKE 278
WP_014128081 314 KFIAVNCAAFPETLIDSMLFGTVKGAFTGATD--KIGLIEAANHGTLFLDEVNSMSPLMQAKLLRVLQEKTLQRIGSTRS 391
NP_249887    197 PMISLNCAAIPETLLESTLFGTTRGAFTGAEN--RKGMFALAQGGSLFLDEINSMPMAMQSKLLRVLQDGSYLPLGSLSP 274
WP_111739223 157 PFIALNCGALPVTLIESTLFGTVKGGFTGAEN--TQGYLELANGGTLFLDELNAMPVDVQGKILRFLQEKTFWKVGGSKE 234
WP_083273766 280 PFIDINCSAVPSNLFESMFFGTEKGAFTGSI--AKKGFFEMADGGTIFLDEVNSISIEMQAKLLRVLQEKRFQRIGGEKY 357
WP_069975938 448 IPIDVRILAASNKNLMEEIYKGNFREDLYYRLAVLELELPPLRDRKGDVQELIYYFIKEKA----KG-NMIIAQDAIQML 522
WP_012696323 264 LKADVRLVAALNQNPLEAIRDGRLREDLYYRLNVGVITIPALRERPSDIALLARRFVARDAcelnSA-ITGIADAALAQL 342
WP_038517044 279 QHADVRIVAAMNESPAELLKTGKMRSDLFYRLNVGLIKLPALRERKEDIPVLARYFIDKHKtdvnVV-ITGISEHALQQL 357
WP_082636011 599 IHVDVKIIAATNADLIHLVEQKKFRADLYYRLSTLRLNIPPLRDRGNDVILLARHFARVVChriqRSvPAELAPDAEQLL 678
WP_065535369 283 IPLRAGIIASTNQNLLAMSERRAFRADLYYRLSTIELYLPPLRARPEDIPLLIDRLCAQKGg------rLRLTSQAMEYL 356
WP_014006665 279 IRADLRVIAAANETQQEMLAARKLRPDLLYRLNIGQLSIPPLRERCGDIPLLAEAFLHKHRgvagGR-VKRIAPAAMRQL 357
WP_014128081 392 IPIDVRILSSSNEDVYRLSQEGKMRQDLFYRLSSLILEIPPLRRRMEDLPELVQYFIDHHPhltaQP-IHELTSKFWRRL 470
NP_249887    275 QRADVRLIAASNQPPRQAIAEGRLREDLYYRLDVGSLCIPPLRERPGDVELLARAFVRRDArslnPR-VTALGERALAQL 353
WP_111739223 235 LSADIRIIVAMNESPYEMLRQKRLRDDLFYRLEIGMVVIPPLRERKDEIIPLARHFMAKHQassnMQ-VYPFPSSVEKQL 313
WP_083273766 358 LRCDVRIIAAANEDLHELMEQQKIRKDFYYRISAIKIEIPSLNERKEDIPILARYFLIELCnqynRP-QMVISNQVLDVF 436
WP_069975938 523 CDYDWPGNVRQLANIIERLTVICE-GG-----I--IDGEKTAEVLK--N-M---Tf-iKp--dAn--kSkekPASeteak 583
WP_012696323 343 MQHDWPGNVRELENVIRRSLLLSQ-DSgl-lsS--INFCTGPLEV-------------P----R----Ag--PSAlad-- 393
WP_038517044 358 MSAPWPGNVRMLENAIVRSIVLQN-EPge-lqQ--IILDDELFDI-------------H----S----Py--PENqsetk 410
WP_082636011 679 LQLPLKGNVRELQNLIEGVIQLNS-DF-----Y--IEARHFQEYLG--M-SpagE---EdsvlP----P---PPDapast 737
WP_065535369 357 QRYTWPGNVRQLKNLVGRWLVFYD-GV-----Q--ITGRHVVDELTigQrSyneAfgvTdp-lAg--tA---SPSg---- 418
WP_014006665 358 QACRWPGNVRMLENVMQRSLIFCE-TGde-lqA--IWIGEDAADTr----Sh--D---A----P----Ae--PVAdtq-- 412
WP_014128081 471 LEHDWPGNVRELFHILSYAISV-SqNG-----I--LDERDFPSYFL--R-H---S---A----Pl---E---RKEtgree 523
NP_249887    354 LACDWPGNVRQLENVIRRSLLLHG-EGgalldE--VAFADDGAEA------------------V----Gg--EAAlsm-- 404
WP_111739223 314 LEYEWPGNVRMLENVIVRSLILQK-EPgp-lnE--LIFNNETDVIT--NfSa--E---K----P----Pq--PPRqkeir 372
WP_083273766 437 LEYNWPGNVRELQHVIEYVFNCAS-ED-----IeeVDISHLPDYLL--S-P---S---AldhtSmrdiK---SSKdf--- 495
WP_069975938 584 liniiemligerrntsdiqktskviekEEifndirKevfpeiNLfElNAFAQIEAEIIKEALEKTGGNREKTAELLSIST 663
WP_012696323 394 ----------------------------------------grpL-K-LQLAQVEARLISEVLERLNGNVAAAARELGIPR 431
WP_038517044 411 fek-----------------pstsivaSN------N------NL-T-EQVENYEKQLIIDALNQANGKIIAAAKLLNISR 459
WP_082636011 738 -------------------------------------------igtapPQQSLTREALEHALLINRFNRTDTARYLGVSR 774
WP_065535369 419 ---------------------------PA------S------Ap-P-PTLADQERAALEQALAYARGNRALAARVLGISR 457
WP_014006665 413 ------------------------gqgSG------L------SL-E-EQMSSYEKTLLIGLLKE-HASLSEVARRCAIPR 453
WP_014128081 524 m--------------------dpvpaaVG------R------TF-A-EQMDDFERNLLWNTYLSCGKNVTKAAEALGLTR 569
NP_249887    405 ------------------------nsaAV------G------GL-R-EALAQQERNLIEDALRQARGNLSRAAARLRIPR 446
WP_111739223 373 y---------------------dppsaQG------T------TL-T-DKLEAYENQLLIEALKASQGCVAKAARVLGVSR 417
WP_083273766 496 -------------------------fnEN------N------TL-E-TQLAFFEKEIIYQQLQKHGGNITKSAKSLGISR 536
WP_069975938 664 TTLWRKMKKFN 674
WP_012696323 432 TTLMVRMKKLK 442
WP_038517044 460 TTLQYKVKKYH 470
WP_082636011 775 RTLYRWMERYH 785
WP_065535369 458 TALYQKLERFR 468
WP_014006665 454 ATLQYKLKKHN 464
WP_014128081 570 QNFQYHMKKFQ 580
NP_249887    447 TTLLGRMRRLG 457
WP_111739223 418 GALQYKVKKHN 428
WP_083273766 537 QSLQYRMKKTG 547
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap