3VOG,5XCY,5XYH


Conserved Protein Domain Family
Glyco_hydro_6

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pfam01341: Glyco_hydro_6 (this model, PSSM-Id:396075 is obsolete and has been replaced by 426212)
Glycosyl hydrolases family 6
Statistics
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PSSM-Id: 396075
Aligned: 116 rows
Threshold Bit Score: 198.611
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3VOG_A             34 DP---VLKAKALKVKEIPTFIWFDVVRKT-PDLGRYLADATAIQQRTgrkQLVQIVVYDLPDRDCAAAASNGEFSLADGg 109
BGI:SBI_08394      60 RAgryAEAELMRRIADEPIAEWLGPH-P-----RERVRFITESAAREh--RTPVLVAYHIPYRDC-GRYSRGGAGSDAE- 129 Streptomyc...
AEV84146           30 ADghsQQAALLRKIADRPVADWVTDGPIP---VAERVGALVGRAEAAg--QLPVLVAYNIPDRDC-GGHSSGGAASAAR- 102 Actinoplan...
WP_014692535       58 AQgraADATAVRRIADQPAAVWFADADPG---FAGRARDLVTAAAAAg--RTPVLVAYYVPQRDC-GGHSGGGAPDAAA- 130 unclassifi...
CeBiTec:AFR_05270  75 RAgrtEDARTVRRIADQPTATWFADDSPG---YAQRARQLVTAATAAg--RLPVLTFYNIPYRDC-SGQSAGGAADAED- 147 Actinoplan...
EST27388          168 NPddpRARKIAHGLVRRPAARWFGNWNK---DIKADVDAYVAAAAAVg--RLPILAAYNVHNRDA-GGQSSGGAFSPEE- 240 Streptomyc...
Q09A73            229 NGgdsRAVRIQSSIASKPSARWFGNWSG---NITSAVSSYVAAADAAd--KLPVLVAYNIPGRDC-GSHSGGGAGSPEA- 301 Stigmatell...
jgi:FsymDg_1546   153 NSv-pADAAALSRIANTSHADWFGGDTANpDAVRTRVAGRVNEIRAAg--ALPVLVAYAIPNRDC-GSYSAGGAGSPDS- 227 Candidatus...
Q0RFZ3            269 QSd-pAGAQTLSRLADRSHADWFG--DPDpATVRTRVADRVRVVRAAg--ALPVLVAYAIPQRDCGGGQSAGGVGGESA- 342 Frankia al...
jgi:Celf_0233     340 AQgrdSAAALLNRVAAQGSARWLGPQDAt-ATVGASVRTYTRAAAAAg--RTPVLVTYAIPDRDC-GGHSAGGFTTAAE- 414 Cellulomon...
3VOG_A            110 mekYKDYVDRLASEIRKypdVRIVAVIEPDSLANMVTNMnvAKCR-GAEAA--YKEGVIYALRQLSAl--GVYSYVDAGH 184
BGI:SBI_08394     130 ---YLDWIREIVSGIGE---RRAIVVLEPDAIAQVV-----DGCI-PKPLRapRLALLRDAVAMLSAm-pATRIYLDAGN 196 Streptomyc...
AEV84146          103 ---YGEWIRGFARGIGN---RPAVVILEPDAIAHSL-----QGCA-ESg---eRLAVLHDAVTVLKGn-sSTSVYLDAGN 166 Actinoplan...
WP_014692535      131 ---YRDWIGQLAGAVHD---SPALVVLEPDAVTHIL-----QGCL-SPEAAgeRFALLGEAIHAFRAd-pGVRVYLDAGN 197 unclassifi...
CeBiTec:AFR_05270 148 ---YRSWVRALAASLDG---HRALIVLEPDAIPQAV-----QGCL-DAEDTaeRYTLLAEAVDALRAl-pGVLVYLDAGN 214 Actinoplan...
EST27388          241 ---YRAWIDAFAEGIGD---RPALVIVEPDSLAQLGNLS-------TDAARaeRTSLIAHAAEVLAAl-pLVHAYLDGGN 306 Streptomyc...
Q09A73            302 ---YRTWISAFAAAIGN---RPAIVIIEPDAVAQL-------DCLaNDSERqvRLGLLRYATEQLRDratNTWTYLDGGN 368 Stigmatell...
jgi:FsymDg_1546   228 ---YRAWIAAFAAGIGR---GSAAVILEPDAIAQT-------DCL-SAADRqtRYSLLSNAVDVL-Ar-aGVAVYLDAGN 291 Candidatus...
Q0RFZ3            343 ---YRAWIAAFAAGIGS---GPAAVILEPDALAQI-------DCL-APAAAtaRYAMLGYAVDQL-Aa-vGAEVYLDAGN 406 Frankia al...
jgi:Celf_0233     415 ---YRAWVDAVAAGLVG---TRTVVVVEPDALLHL------DRCG----DRdaRLATLAHAVTVL-Tr-aGAEVYLDAAS 476 Cellulomon...
3VOG_A            185 AGWLGW-NANLAPSARLFAQiykdaGRSAFIRGLATNVSNYNALSattrdpvtqgndnyDELRFINALAPLLRNEGW-DA 262
BGI:SBI_08394     197 P---GW-IKDTERLVEPLMK-----SGIDQADGFALNVSNFQPTA--------------VTRAYGRRLSLQLgr-----v 248 Streptomyc...
AEV84146          167 P---GW-ITDTRQLALALRR-----AGIAEADGFALNVANFYTTS--------------DNITFGNGLSDALggh----i 219 Actinoplan...
WP_014692535      198 P---GW-VKDVDRVVDALRS-----AGIADADGFSLNVANFETTQ--------------ANLDYGTSISDRLgg-----t 249 unclassifi...
CeBiTec:AFR_05270 215 P---TW-IEP-GPMTTALRR-----SGIERAYGFALNVANFETTE--------------DNLAYGARLSTLLgg-----t 265 Actinoplan...
EST27388          307 A---TW--IRPGDMAERLAA-----AGVAKVRGFAVGVANFDATD--------------ISCTYGQQVSTALSGLGVhGA 362 Streptomyc...
Q09A73            369 A---QW--IAADTMAQRLES-----AGVKNIRGFALNVSNFYTTA--------------QSNPYGASVNSALSSRYGytr 424 Stigmatell...
jgi:FsymDg_1546   292 A---TW--HSAADTAARLRA-----AGVDRARGFALNVSNFDETA--------------DERAYAAAVSAALggt----a 343 Candidatus...
Q0RFZ3            407 A---SW--HSVADTAARLRQ-----AGVARARGFALNVSNFDETA--------------DETAYGDAVVAALggt----a 458 Frankia al...
jgi:Celf_0233     477 SNSFGWgTAALREMALRLRA-----AGVDQAAGFAVNTSNFQRSE--------------HEVAYGRYLSALLgg-----t 532 Cellulomon...
3VOG_A            263 kFIVDQGRSGV----------------------QNI-RQEwGNWCNVYGAGFGMRPTLNTPSsAIDAIVWIKPGGEADGT 319
BGI:SBI_08394     249 hFIIDTSRNGNgpltsvrgegddgksgdmgavrSAS-DGQ-ESWCNPPGRALGDPPSTRTGDpAIDAYLWIKRPGESDGP 326 Streptomyc...
AEV84146          220 hFVVDTSRNGDgp-------------------aPS--DDT-SRWCNPPGRALGAAPTTETGQpLVDAFLWVKRPGESDGS 277 Actinoplan...
WP_014692535      250 hFVIDTSRNGNgp-------------------aTTAtSGD-GHWCNPPGRALGPAPTTRTGHdRVDAYLWVKRPGESDGA 309 unclassifi...
CeBiTec:AFR_05270 266 hFVIDTSRNGNgp-------------------aQKG-AGD-RHWCNPSGRALGETPTTRTGVpLADAFLWIKRPGESDGA 324 Actinoplan...
EST27388          363 rFVIDTSRNGNgaldg---------------------ngqhAGYCNPAGRRLGVPSSMGIGG--AEYLLWIKAPGDSDGL 419 Streptomyc...
Q09A73            425 qFVVDTSRNGNgs---------------------------nGEWCNPGGRKLGSPSQVGTGT-GAELLLWVKSPGESDGN 476 Stigmatell...
jgi:FsymDg_1546   344 hAVIDTSRNGLgp-------------------aPG------NVWCNPPGRALGAAPTGNTGDpIVDAYLWIKVPGESDGT 398 Candidatus...
Q0RFZ3            459 hYVVDTSRNGRgp-------------------aAD------NAWCNPPGRGLGVAPSGRTGNpRADAYLWIKVPGESDGA 513 Frankia al...
jgi:Celf_0233     533 sFVVDTSRNGNgal-----------------aaPGG-----TVWCNPAGRALGSPPRATLDGpHV-ADLWVKTPGLSDGT 589 Cellulomon...
3VOG_A            320 SDTSAPR 326
BGI:SBI_08394     327 C-NGGPP 332 Streptomyces bingchenggensis BCW-1
AEV84146          278 CRSGEPP 284 Actinoplanes sp. SE50/110
WP_014692535      310 CGDGAPP 316 unclassified Actinoplanes
CeBiTec:AFR_05270 325 CGSGAPP 331 Actinoplanes friuliensis DSM 7358
EST27388          420 GGTAPTT 426 Streptomyces roseochromogenus subsp. oscitans DS 12.976
Q09A73            477 CGIAPGA 483 Stigmatella aurantiaca DW4/3-1
jgi:FsymDg_1546   399 C-NGGPG 404 Candidatus Frankia datiscae
Q0RFZ3            514 C-NGGPA 519 Frankia alni ACN14a
jgi:Celf_0233     590 C-GGGPP 595 Cellulomonas fimi ATCC 484
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