6VAI


Conserved Protein Domain Family
Ca_hom_mod

?
pfam14798: Ca_hom_mod (this model, PSSM-Id:405484 is obsolete and has been replaced by 434219)
Calcium homeostasis modulator
This family of proteins control cytosolic calcium concentration. They are transmembrane proteins which may be pore-forming ion channels.
Statistics
?
PSSM-Id: 405484
Aligned: 77 rows
Threshold Bit Score: 190.133
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
6VAI_A        41 ENFRFLSLFFKSKDVMIFNGLVALGTVGSQELFSVVAFHCPCSPAR--NYLYGLAAIGVPALVLFIIGIILNNHtWNLVA 118
XP_001379558   3 dssfsnilCSLQKSGSFVNTLIAILTICGQQLFSSFTFSCPCQPGN--NLYYGSAFLIIPALVLLVIGYALRSQtWMMTK 80  gray short-tail...
XP_003781659   2 srTLHSIVSSLQRSGTFINSLIAALTICGQQAFSSFTFRCPCQVGK--NFLYGSAFLVMPALILLVAGYALRRQmWTITG 79  small-eared galago
Q8CE93         2 spdlnciSSSLLRSEPCINSLIAILTVCGQQLFSSYTFSCPCQVGK--NFYYGSAFLVVPALILLIAGYALRGQmWTVAS 79  house mouse
XP_005043557   2 tFLPKWLTFLKGKEVVIANAIIAILTIGGQQLFSFFTFSCPCHVGQ--NLVYGLAFLGVPALILLIVGYALNNQtWRLVM 79  Collared flycat...
XP_002938338   1 msLQPILTFLKSKESILFNAVVAILTVGGQQLFSFFAFSCPCSPSK--NLNYGLAFLGVPALVLLVVGFVFNDNtWRLLM 78  tropical clawed...
EDL94373       2 DKFRMIFQFLQSNQESFMNGICGIMALASAQMYSAFDFNCPCLPGY--NVVYSMGILLTPPLVLFLLGLVMNNN-ISMLA 78  Norway rat
XP_001637349  17 NPSAFVPK---SSKVTLKQVLVLVLVFGIERIFEKDVFECPPSR----YFMYGSLFLVGPAICLFSLTLLLFPTfWEVVT 89  starlet sea ane...
EFP07397       7 sVVTVFQNVFTNHGSTLLNGILIATTIGGQSLVRKLTFSCPC--AYplNMYHSLVFIFGPTAALLLIGITINSTtWKLAH 84  Caenorhabditis ...
XP_009858565   3 tifAAFGKTVGNNKGSIQNFGIVGVTIATEEIAKFIFFYCPC--DYpaNKIYGSVFIWGPAFVLLLAGFLVNRRtWRLTT 80  vase tunicate
6VAI_A       119 E--C---------QHRrtkncsaAPT---FLLLSSILGRAAVAPVTWSVISLLRGEAYVCA--LSefVDPSSLTAreehf 182
XP_001379558  81 EscCsss---phlRSVnslqrklACL-----MFFSITGRALVAPLTWLAVTLLTGTYYECA--ASeyASVEQYSM----- 145 gray short-tail...
XP_003781659  80 Eh-Ccsca--pgrRRLsplerrlACL-----GCFGITGRAVVAPLAWLAATLLTGTYYECA--ASqfASVDHYPE----- 144 small-eared galago
Q8CE93        80 EycCcsct--ppyRRSsplerrlACL-----MFFDITGRALVAPLTWLTVTLLTGTYYECA--ASefASVDQYPM----- 145 house mouse
XP_005043557  80 GkrShfg---rvtPSNwwlkcklVCF-----VLCSITGRALVAPVTWLAVTLINGSYYICA--VSeyVPVYYYGA----- 144 Collared flycat...
XP_002938338  79 Gs-ShshavqersRQStimkyklICF-----VIGNITGRAMVAPITWLAVTLLNGSYYVCA--LSeyADVEQYDI----- 145 tropical clawed...
EDL94373      79 EewK---------RPLgrrakdpAVL---RYMFCSMAQRALIAPVVWVAVTLLDGKCFLCA--FCtaVPVATLGNg---- 140 Norway rat
XP_001637349  90 GcwG---------AHFskrwvtkNLV--------KILFQALLPPGVWIVVALMRSNYYICLklGPkkLALDRALR----- 147 starlet sea ane...
EFP07397      85 GffF---------RVRdtrhswkTTC----ASWIEVLLQSSIAPIAWLFVVFLDGGYYRCYrsHEfcLTADAILCkne-t 150 Caenorhabditis ...
XP_009858565  81 Gl-C---------NRTngvgkggKRIfhfLFIFFQIFVKAFIAPATWLILAFLKGDYYACAr----wPNPEDYQArar-h 145 vase tunicate
6VAI_A       183 psAHATE-------ILARF--------PCKENP-DNLSDFREE--VSRRLRYESQLFGWLLIGVVAILVFLTKCLKHYCS 244
XP_001379558 146 ---FNNYseperqeILAEF--------PCFEQIsPDMLMVRDE--VALQLRYQSQMWGWTLIAVATLVAFLSCCLARCCS 212 gray short-tail...
XP_003781659 145 ---FANFsasereeILAGF--------PCSTPPpSDLLPVRDE--IVLLHRYQSQMLGWILITLATITILVSSCLARCCS 211 small-eared galago
Q8CE93       146 ---FANVtpskreeMLAGF--------PCYTSApSDVIPIRDE--VALLHRYQSQMLGWILVVLATIALLLSKCLARCCS 212 house mouse
XP_005043557 145 ---APNVtasersrILATF--------PCSQLVpPELTRARDE--VILLLRYQSQVAGWLLIAVVVITVFLSYCLASCFS 211 Collared flycat...
XP_002938338 146 ---LRSLteaerrrFLAQF--------PCAQFVpANLTRVKDE--VVLQLKYQSQVAGWILVAVVTISIFITLCIARCCS 212 tropical clawed...
EDL94373     141 -sLVPGLpapelarLLARV--------PCPEIYdGNWLLAREV--AVRYLRCISQALGWSFVLLTTLLAFVVRSVRPCFT 209 Norway rat
XP_001637349 148 ---------------------------ALNGSTvAQVKANVDE--TFSKAKADSEMLAWILFDSIVMLAFIVVCIRRCWC 198 starlet sea ane...
EFP07397     151 vwNSYATs-----tSFNRIsdngkycpPCICFPnPT---------DASYLEAESQIYAWALLVVAGVGAFLVITCHRMCD 216 Caenorhabditis ...
XP_009858565 146 hlKASND-------SLPR---------PCMFNPnPIKFDGSEAeiIARNLRAESHTIGWFYVCFGMSIGIVLVLIFRCRS 209 vase tunicate
6VAI_A       245 PLSYRQEAYWAQYRANEDQL----FQRTAEVHSRVLAANNVRRFFGFVAL 290
XP_001379558 213 PLTSLQHQYWCTHMRNERQL----FEEAAEQHSRVLITQRIKELFGFVPG 258 gray short-tailed opossum
XP_003781659 212 PLTSLQDYYWNNHLQNERQL----FEEAAEQHSRLLITQRIKKLFGFVPG 257 small-eared galago
Q8CE93       213 PLTSLQHHYWTNHLHNERVL----FEKAAEEHSQLLIRHRIKKVFGFVPG 258 house mouse
XP_005043557 212 PLSFLHFRYWSSYVHNEQEL----FDEATDQHSRLYAMQNVRKFFGFFPG 257 Collared flycatcher
XP_002938338 213 PLTFLHLKYWTSYVNNEQIL----FEQATDQHSKIYALLNIKKFFGFSPG 258 tropical clawed frog
EDL94373     210 QVAFLKSKYWSHYIDIERKL----FDETCTEHAKAFAKVCIQQFFEAMNH 255 Norway rat
XP_001637349 199 MRAEGSLPELDHYDKLEAEAaageFKILLEQRAEKAGKSNVHDEFENAKT 248 starlet sea anemone
EFP07397     217 KYTLVQRQYVETYKNVETQK----FDAVAKEHASQLAEHNARAFFGQKDW 262 Caenorhabditis remanei
XP_009858565 210 KYSYEQSNYIDRYRQSEIQQ----FEDELDKKAAEQAKRIVDGYFSKprs 255 vase tunicate
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap