Conserved Protein Domain Family
YjbI

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COG1357: YjbI (this model, PSSM-Id:224276 is obsolete and has been replaced by 440968)
Uncharacterized protein YjbI, contains pentapeptide repeats [Function unknown]
Statistics
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PSSM-Id: 224276
Aligned: 105 rows
Threshold Bit Score: 54.496
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15892731 297 YIKLTSaefdlylaeaakQSNTKLSLTEFVRKQKNLsEDLNIVPDLSAInlsgktlTNLNLKNTLFASANLENvkisncn 376  Rickettsia conorii
15800148  25 KQDLNQnlie-----rlwNKIRDFFLDSDKQKAFKS-IHKYINTLSVLNynsaltpDPNFNIDATSDLDSYLK------- 91   Escherichia coli O...
15800148  25 KQDLNQnlie-----rlwNKIRDFFLDSDKQKAFKS-IHKYINTLSVLNynsaltpDPNFNIDATSDLDSYLK------- 91   Escherichia coli O...
15830814 150 YLNGCNs----------lNESQCQFLAYDVSQGRAC-LSKAELTADLIWl------SANRTGEESAEELNYSG------- 205  Escherichia coli O...
15834549 326 WKRFCEtcerfyvaqksiTGDKSERLTRKLSISDAG-ITMTFKIGDVVIntistaiPEDATGQRCIEGLNLAE------- 397  Escherichia coli O...
15672736   1 -----------------------MTINQRTIFSGCSfKNTTFEFTDNT---------ISEFTDCLFEKCDFSN------- 41   Lactococcus lactis...
20089396   1 ------------------------MEYQNEEFEAETfKDTDLTDVSFKD---------SRFIDCDFENCNLSN------- 40   Methanosarcina ace...
15801293  17 YLNGCNs----------lNESQCQFLAYDVSQGRAC-LSKAELTADLIWl------SANRTGEESAEELNYSG------- 72   Escherichia coli O...
15804658 104 DDRITRrv---------yLNKDKEVSIKVVYFINNV-TVHNNTIEIPQTvnggydfSHLSLKGIVIKDEDLSN------- 166  Escherichia coli O...
418554   104 DDRITRrv---------yLNKDKEVSIKVVYFINNV-TVHNNTIEIPQTvnggydfSHLSLKGIVIKDEDLSN------- 166  Escherichia coli
15892731 377 ldfTNFEGANLQNAvfqnvtarnagflfadlkkskiensdmsraympkvDLSEVEVTNSKFNAvmmvnadaekliikdse 456  Rickettsia conorii
15800148  92 ---LDFDRLSPKQK-----------------------------------QTTLCCFWNKIASSlpepy---------nst 124  Escherichia coli O...
15800148  92 ---LDFDRLSPKQK-----------------------------------QTTLCCFWNKIASSlpepy---------nst 124  Escherichia coli O...
15830814 206 ---CDLSGLSLVGL-----------------------------------NLSSVNFSGAVLDdtd--------------- 232  Escherichia coli O...
15834549 398 ---MDLTDIDLSKM-----------------------------------ALRNVNFNGSILRNakfsgticegvdftdcd 439  Escherichia coli O...
15672736  42 ---LNFNKIGIYRS-----------------------------------IFKSCKLLGTDFT------------------ 65   Lactococcus lactis...
20089396  41 ---VDLDNTKFQNIr-----------------------------------FKSCKILGLDFSK----------------- 65   Methanosarcina ace...
15801293  73 ---CDLSGLSLVGL-----------------------------------NLSSVNFSGAVLDdxd--------------- 99   Escherichia coli O...
15804658 167 ---SNFAGCRLQNA-----------------------------------IFQDCNMYKTNFNFai--------------- 193  Escherichia coli O...
418554   167 ---SNFAGCRLQNA-----------------------------------IFQDCNMYKTNFNFai--------------- 193  Escherichia coli
15892731 457 wtNSNLTGISLAYADMQRVqmqgvvlnnaLLDQANIVSTNLENVfmnkthaleakfkeqcnmqgitarnayfsdaefeni 536  Rickettsia conorii
15800148 125 ikHNIIFYKDGENLMIRGT-----------ISIVNEVVKTYSLPi----------------------------------- 158  Escherichia coli O...
15800148 125 ikHNIIFYKDGENLMIRGT-----------ISIVNEVVKTYSLPi----------------------------------- 158  Escherichia coli O...
15830814 233 lrMSDLSQAVLENCSFKNS----------ILNECNFCYANLSNc------------------------------------ 266  Escherichia coli O...
15834549 440 lrNAEFENASLENNDFRKVr---------HLTYVNFKNANLRNSnfng-------------------------------- 478  Escherichia coli O...
15672736  66 --ESHLQDLQFTENLMTYA----------NFSGSTLKSVRFL-------------------------------------- 95   Lactococcus lactis...
20089396  66 --CNDFILAFGFEDSFLSLs---------VFSNMNLENTDFTN------------------------------------- 97   Methanosarcina ace...
15801293 100 lrMSDLSQAVLENCSFKNS----------ILNECNFCYANLSNc------------------------------------ 133  Escherichia coli O...
15804658 194 meKILFDNCILDDSYFAQIkmt-----dgTLNSCSAMHVQFYNAt----------------------------------- 233  Escherichia coli O...
418554   194 meKILFDNCILDDSNFAQIkmt-----dgTLNSCSAMHVQFYNAt----------------------------------- 233  Escherichia coli
15892731 537 lslKEADLREtimqrvklknADLTKAQLDKANLEYADLTNATLTnataqfaklsnatlekaeaeglnisdaiakninaKE 616  Rickettsia conorii
15800148 159 ---EKDDNGY----------YDFSGLYLAHSNISGKDPNKDPDId--------------------------------fGI 193  Escherichia coli O...
15800148 159 ---EKDDNGY----------YDFSGLYLAHSNISGKDPNKDPDId--------------------------------fGI 193  Escherichia coli O...
15830814 267 --iIRALFEN----------SNFSNSNLKNASFKGSSYIQYPPIl--------------------------------nEA 302  Escherichia coli O...
15834549 479 kvlTGVTFTG----------SDLSNAYLEHIDFTTVILYETSKIp--------------------------------gIP 516  Escherichia coli O...
15672736  96 ----ENEAKE----------TFFTACNFKNVELLKNQLEAANF-----------------------------------WE 126  Lactococcus lactis...
20089396  98 -----CQIYD----------CDFVNTNLTNANFENSDLKNSLFK----------------------------------KS 128  Methanosarcina ace...
15801293 134 --iIRALFEN----------SNFSNSNLKNASFKGSSYIQYPPIl--------------------------------nEA 169  Escherichia coli O...
15804658 234 --mNRANIKN----------TFLDYSNFYMAYMAEVNLYKVIa----------------------------------pYI 267  Escherichia coli O...
418554   234 --mNRANIKN----------TFLDYSNFYMAYMAEVNLYKVIa----------------------------------pYI 267  Escherichia coli
15892731 617 AnFKNAIMQRADLTKANFTKavlenADMQAVEAAEAIFKeaklkQANLKAANLAGinkegadfdkakindatkmhdtkge 696  Rickettsia conorii
15800148 194 D-MGNCNCSNVNFEHTYFYG-----VKFTNANCTNANFNncrfkKCDLTNMNCTG------------------------- 242  Escherichia coli O...
15800148 194 D-MGNCNCSNVNFEHTYFYG-----VKFTNANCTNANFNncrfkKCDLTNMNCTG------------------------- 242  Escherichia coli O...
15830814 303 D-LTGAIIIPGMVLSGAILGd---vKELFSEKSNTINLGgcyidLSDIQENILS-------------------------- 352  Escherichia coli O...
15834549 517 G-TPQIPGTPKVILTGAILNy----SDLSGKDLSEYNLTgilcmYTNFSNANLTN------------------------- 566  Escherichia coli O...
15672736 127 TaLAGIDFSTNQFERMEVTPq---lAKNMKISLSQAPFF-----T-SLFGIEII-------------------------- 171  Lactococcus lactis...
20089396 129 N-LSFTSFKNAKNYDINPNE-----NFLKKTVFSIPEVIs----LLDIYDIVLG-------------------------- 172  Methanosarcina ace...
15801293 170 D-LTGAIIIPGMVLSGAILGd---vKELFSEKSNTINLGgcyidLSDIQENILS-------------------------- 219  Escherichia coli O...
15804658 268 N-LFRADLSFSKLDLINFKH-----ADLSRVNLNKAILQ-----NINLIDSKLFF------------------------- 311  Escherichia coli O...
418554   268 N-LFRADLSFSKLDLINFEH-----ADLSRVNLNKATLQ-----NINLIDSKLFF------------------------- 311  Escherichia coli
15892731 697 akgnldhqdkdgkktsvnvnehaklqdkihareksgwflktgvGQLCTKLAKSTTSGISRVTNFLASKKFLVGLAVVAGL 776  Rickettsia conorii
15800148 243 -------------------------------------------AILDNAMIYGKEKEPEMQYPEADQIIQRITYQKSDGN 279  Escherichia coli O...
15800148 243 -------------------------------------------AILDNAMIYGKEKEPEMQYPEADQIIQRITYQKSDGN 279  Escherichia coli O...
15830814 353 --------------------------------------------VLDNYTKSNKSILLTMNTSD-------DKYNHDKVR 381  Escherichia coli O...
15834549 567 -------------------------------------------CKISNANFSNAKFYNTNCTGANCSNILFDYAWFDNTI 603  Escherichia coli O...
15672736     --------------------------------------------------------------------------------      Lactococcus lactis...
20089396     --------------------------------------------------------------------------------      Methanosarcina ace...
15801293 220 --------------------------------------------VLDNYTKSNKSILLTMNTSD-------DKYNHDKVR 248  Escherichia coli O...
15804658 312 -------------------------------------------TRLTNTFLEMVICTDSNMANVNFNNANLNN-CHFNCS 347  Escherichia coli O...
418554   312 -------------------------------------------TRLTNTFLEMVICTDSNMANVNFNNANLSN-CHFNCS 347  Escherichia coli
15892731 777 AVAAAPFVAMPVLL 790  Rickettsia conorii
15800148 280 ETKGMILTNCS-CV 292  Escherichia coli O157:H7 EDL933
15800148 280 ETKGMILTNCS-CV 292  Escherichia coli O157:H7 EDL933
15830814 382 AAEELIKKISLDEL 395  Escherichia coli O157:H7
15834549 604 FIKTLFKNTCFYNV 617  Escherichia coli O157:H7
15672736     --------------      Lactococcus lactis subsp. lactis
20089396     --------------      Methanosarcina acetivorans C2A
15801293 249 AAEELIKKISLDEL 262  Escherichia coli O157:H7 EDL933
15804658 348 VLTKAWMFNTRLYR 361  Escherichia coli O157:H7 EDL933
418554   348 VLTKAWMFNIRLYR 361  Escherichia coli
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