Conserved Protein Domain Family
LIX1

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pfam14954: LIX1 (this model, PSSM-Id:373420 is obsolete and has been replaced by 464400)
Limb expression 1
This entry represents the limb expression 1 (LIX1) family.
Statistics
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PSSM-Id: 373420
Aligned: 11 rows
Threshold Bit Score: 401.436
Created: 21-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_004072468  17 SQSETDDNPKNLNVVAILHNFWEQKQrAQleesSAGSEIESLLLYESASSPGPPY---VCYVTLPGGSCFGNYKVCDTQA 93  Japanese medaka
XP_797503     63 SFAKHTQGYGRVNVVEALQEFWQMKA-AR----GTELKNGPIVVYESVPSSSAPY---VCFVTLPGGSCFASFQDCPTKA 134 purple sea urchin
EDO39622      37 SFAKHTQGYGGVNVIDALEEFWNMKK-AK----GAKFKTGDCVSYEPGSAEKPPY---VCFVTLPGGSCFGSFQPCPTKA 108 starlet sea ane...
XP_002406027  40 SFAKSPQGYSRGISTKTGLEYWVKAKqTA--------SIECMVASTELPVPQQSLgndYWFIMLLCLSPFDALCNCPTKA 111 black-legged tick
OWR45934      21 DVYRADGVLSTVNVVEALQEFWQVKA-SRnggaGAG-SSGALVIYESVPAKHPPF---VCYVTLPGGACFGSFENCPTKA 95  Danaus plexippu...
EFX86835      16 SFAKHSQGYGRVNVVEALQEFWQMKQ-AR----GADLKNGALVIYESVPSSSPPY---VCYVTLPGGSCFGSFQNCPTKA 87  common water flea
XP_002128590  18 SFKQHSSQKQDVGAVEALQEFWQMKK-SR----GLSFSRSAEVEYEFVPSPDHVY---VAYVTLPGGSCFGNFETCTTKE 89  vase tunicate
NP_001071471  17 PHRDPALVFKDLNVVSMLQEFWESKQ-QR----RAAFPSEGVVVYESLPSPGPPY---VSYVTLPGGSCFGNFQCCLSRA 88  cattle
XP_006012120  17 PHRDPALVFKDLNVVGMLQEFWERKQ-KR----SPVIQSEGLVAYESVPSPGPPF---VCYVTLPGGSCFGNFKCCSSTA 88  coelacanth
XP_006626845  68 PNTDSSSVFKDLNVVGMLHEFWKRKQ-TG----GVLVRPESLVVYECVSSPSPPF---VCYVTLPGGSCFGNFQCCLTKA 139 spotted gar
XP_023815634 100 SFAKHTQGYGRVNVVEALQEFWQMKQ-TR----GADLRNGALVVYEMVPSNSPPY---VCYVSLPGGSCFGSFQFCPTKA 171 Japanese medaka
XP_004072468  94 EARRDAARVALMNSLVNELPCRRISPDFIFQSLQQA----------AKNNAVHMNDAH-DPNTSLGTYNLLLHSFMGRTM 162 Japanese medaka
XP_797503    135 EARRSAAKIALMNSVFNEHPTRKITDKFSQQAVDDA----------KKSFEGPIEDEQ-DPSTSLGAFRFMLEANRGKSM 203 purple sea urchin
EDO39622     109 EAKRSAAKIALMNSVFNEHPSRKITDDFIDQAVHEAqgteakvaakRRTMSLKPQDPH-NPNTGVGAFRFMLEANKGRTM 187 starlet sea ane...
XP_002406027 112 EARRSAAKIALVNSVFNEHPSRRISDEFVAQAVREA----------RASFGVSTFPRYiGQSGGVDAFRFMLEANRGRTM 181 black-legged tick
OWR45934      96 EARRSAAKIALMNSVFNEHESRRISEHFIEKAVAEA----------RASFAGDAASHHqDPSAGIAAFRFMLEANKGRTM 165 Danaus plexippu...
EFX86835      88 EARRSAAKIALMNSVFNEHPSRQISDDFIEKAVAEA----------RASFKGDPDEAD-NPNTGIGAFRFMLEANKGRTM 156 common water flea
XP_002128590  90 QAKQNAAKLALMNSVLSEHPNNKVTAESSKKMLAEA----------TKPFQSKLGIGH---NKALKTFSEILHSHSGDSV 156 vase tunicate
NP_001071471  89 EARRDAAKVALINSLFNELPSRRITKEFIMESVQEA----------VASTSGTLDDAD-DPSTSIGAYHYMLESNMGKTM 157 cattle
XP_006012120  89 EARRDAAKVALMNSVFNELPCRRITKEFIVKTVQEA----------VLSTSGSISDAD-NPGTSIGAYHYMLKSNMGKTM 157 coelacanth
XP_006626845 140 EARRDAARIALMNSVFNELPSRRITQEFISRSLQEA----------ATTTSGSLGDAR-DPSTSIGAYCFMLESNKGKTM 208 spotted gar
XP_023815634 172 EARRSAAKIALMNSVFNEHPSRRITDDFIEKSVSEA----------LTSFNGNREEAD-NPNTGIGAFRFMLESNKGKSM 240 Japanese medaka
XP_004072468 163 LEFQEMMIVFQLLQWNGTLKALRERRCSRQSVIAYYCQRRLDEYMHSSMALDWLGREQRSP---GLLGLELQVAQKELVL 239 Japanese medaka
XP_797503    204 LEFQELMTVFQLLHWNGSLKAMRERDCSRQEVLAHYSHRALDDDMRSQMALDWISREQEMA---NIIARELAVADEEIER 280 purple sea urchin
EDO39622     188 LEFQELMTIFQLLHWNGSLKAMRDRNCSRQEVLAHYNERIIDDDMRSQMALDWISREQEQP---GLIAEELSRATNELEQ 264 starlet sea ane...
XP_002406027 182 LEFQELMTVFQLLHWNGSLKAMRERQCSRQEVLAHYSQRPLDDDMRSQMALDWAAREHHAP---GRIAQEMAAARAELEA 258 black-legged tick
OWR45934     166 LEFQELMTVFQLLHWNGSLRAMRERQCSRQEVVAHYSARALDDAMREQMAREWANRERESTtggGVLRSELARAELELRS 245 Danaus plexippu...
EFX86835     157 LEFQELMTVFQLLHWNGSLKAMRERQCSRQEVVAHYSHRALDDDMRSQMALDWIAREQETP---GIVSRELNMAERELEA 233 common water flea
XP_002128590 157 LQFQEAMTVFQLLHWNGSLKAMRERNCTREEVIQHYSNRTIDSDLRDQMSLDWVARDERTP---GIILQELKLAESELDT 233 vase tunicate
NP_001071471 158 LEFQELMTIFQLLHWNGSLKALRETKCSRQEVISYYSQYSLDEKMRSHMALDWIMKERESP---GILSQELRMALRELEE 234 cattle
XP_006012120 158 LEFQEVMTVFQLLHWNGSLKSLREKKCSRQEVIACYSQNSLDAHMRSHMALDWIMKEQEIP---GTISQELQVVHKELEE 234 coelacanth
XP_006626845 209 LEFQEIMTVFQLLHWNGSLKVFRERKCSRQEVISYYSQHRLDEYTRSHMALDWISKEQETP---GLISHELQLALKELGQ 285 spotted gar
XP_023815634 241 LEFQELMTVFQLLHWNGSLKAMRERQCSRQEVLAHYSHRALDDDMRTQMAADWVNREQSMA---GTIAQELASTERELED 317 Japanese medaka
XP_004072468 240 ARRRGIELRFYKEKNDILSLALSQ 263 Japanese medaka
XP_797503    281 ARHAGRELRFPKEKKDILMLACSQ 304 purple sea urchin
EDO39622     265 CRLSGRELRFPKEKRDILMLACSQ 288 starlet sea anemone
XP_002406027 259 ARLAGRELRFPKEKQDILGLACAQ 282 black-legged tick
OWR45934     246 ARIAARELRFPKEKRDILLLAASQ 269 Danaus plexippus plexippus
EFX86835     234 ARLAGRELRFPKEKREILMLACSQ 257 common water flea
XP_002128590 234 ARNSGKELRFFKEKLEVLSLAQTQ 257 vase tunicate
NP_001071471 235 ARKAGQELRFYKEKKEILSLALTQ 258 cattle
XP_006012120 235 ARKAGRELRFYKEKKEILSLALSH 258 coelacanth
XP_006626845 286 ACKAGRELRFYKEKKEILSLASSQ 309 spotted gar
XP_023815634 318 ARLAGRELRFYKEKKDILMLAVGQ 341 Japanese medaka
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