2OHH,4DIL,4DIK,1VME,1E5D,2Q9U,1YCF,4FEK,4D02


Conserved Protein Domain Family
flavodiiron_proteins_MBL-fold

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cd07709: flavodiiron_proteins_MBL-fold 
Click on image for an interactive view with Cn3D
catalytic domain of flavodiiron proteins (FDPs) and related proteins; MBL-fold metallo-hydrolase domain
FDPs catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively. In addition to this N-terminal catalytic domain they contain a C-terminal flavin mononucleotide-binding flavodoxin-like domain. Although some FDPs are able to reduce NO or O2 with similar catalytic efficiencies others are selective for either NO or O2, such as Escherichia coli flavorubredoxin which is selective toward NO and G. intestinalis FDP which is selective toward O2. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. Some members of this subgroup are single domain.
Statistics
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PSSM-Id: 293795
Aligned: 295 rows
Threshold Bit Score: 176.138
Created: 19-May-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:2OHH: Methanothermobacter thermautotrophicus coenzyme F420h2 oxidase (Fpra), a diiron flavoprotein, binds riboflavin monophosphate and ferrous ions
    View structure with Cn3D
  • Structure:4D02: Escherichia coli flavorubredoxin binds one O, two ferrous irons, and a phosphate
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
2OHH_A      6 KRISd---GVYWTGVLDWDlrnyhgytlQGTTYNAYLVCGdeGVALIDNSYp--GTFDELMARVEDAlqqvgmERVDYII 80  Methanothermobacte...
ABI15618    7 TSIDaiapDIYRVHTPVPAee-----fpGGFSFNQYLIVDe-RPLLFHTGPr--RLFPSIREAIERVip---lSSLRYVA 75  consortium cosmid ...
EFH88257    2 AQINqvaeGIYRISSFSPT---------VGISFNQFLIDDe-YPTLIHTGTy--PLYEGVRQAVSEIld---pKRLTYIV 66  Ktedonobacter race...
EHQ05165   36 IEIAd---GIYWIGFADFE---------AGFSNNPYLVADgnEAVLFDPGPghpVFRDIVYSKIRQIid---pAKIRYIV 100 Leptonema illini D...
EUC19278   13 HEVAd---SIYRINTPVFFeg-----gpGGFSFNQYLIVDd-APLLFHTGPr--KMFALVREAVASVlp---pERLRHIA 78  Burkholderia sp. BT03
AEA24267    5 DEIAp---DIFRIGLGAMPg--------DPITTSFFLIRDe-QPTLVETGYr--KTFDDAWDAVGRLld---pTTVRYVV 67  Pseudonocardia dio...
EGG99429   10 IAITr---EIYWIGFYEES---------SKLHCNPYLLLDddEAVVFDPGSi--PDFPVIMRKVIDLin---pSQISTIV 72  gamma proteobacter...
ABQ54240   13 DEIVp---DIYRISTSISQei-----ipGGFSFNQYLIIDk-KPVLFHTGPl--QLFPAISQAVATVip---vESLCFIA 78  Legionella pneumop...
EQA52962    9 VEIAe---DVYWIGFYDER---------ESLHCNPYMIKNgeNTILIDPGSi--PDFPVVARKIFSLva---pDSIETII 71  Leptospira kmetyi ...
AFM42295    6 VEIAe---DIFWVGGSDQE---------GGLHCNPYLLIDgdEAVLIDPGSv--LDFDYVFENVCSIvp---lAKIKYIV 68  Desulfosporosinus ...
Feature 1       # # ##                                                                     ## 
2OHH_A     81 QNHVEKDHSGVLVELHRRfp--eAPIYCTEVAVKGLLKHypslREAEFMTVKt---GDVLDLGg-KTLTFLETPl-LHWP 153 Methanothermobacte...
ABI15618   76 FSHVEADECGSLPEILAAap--qAQPVCSQVAAMVSVSDl---VDAAPVGLAd---GQLLDLGl-HQLAWQSAPhvPHGW 146 consortium cosmid ...
EFH88257   67 VSHFEADECGGMGRFLAEap--qAVLVCSLVGARANLMQw--dYAGPVRGVQd---GEVLELGr-HHLRFLETPhvPQWD 138 Ktedonobacter race...
EHQ05165  101 VHHQDPDLCGLIPFLENQlh-peLTVMAHPRTALFLPYYg---IRRPIVPVGd---GDQLQLAsgRRIQMIHTPy-VHFA 172 Leptonema illini D...
EUC19278   79 FSHVEADECGSLNEWLAAap--dAQPLCSGVAKLVSIDDl---ADRPARGLEd---DETVDLGr-HRLRWLATPhlPHAW 149 Burkholderia sp. BT03
AEA24267   68 VPHLEGDESGALNHFLERap--nAQAVGSPIGAAVNLSDf---AVREPLAVDe---STAFDLGs-HRLRFLITPy-VHQW 137 Pseudonocardia dio...
EGG99429   73 TSHQDPDVCGNLAVFEDVvsrpdLRIAAHLNTIRLIQHQa---LKSELYAVDqhdfKITLKSG--RELEFIFVPf-LHSP 146 gamma proteobacter...
ABQ54240   79 FSHFEADECGSLNEWLKVap--dAVPMCGRIAAMLSINDl---AIRSPKVMNd---LEQVSLGk-HNVQWLDAPhlPHGW 149 Legionella pneumop...
EQA52962   72 LQHQDPDLCANVPIFEDLrgdtqVQLIAETRTVYLIKHYg---VKGSVVRIGdsltDFETPSG--RKLQFISTPf-AHSP 145 Leptospira kmetyi ...
AFM42295   69 LHHQDPDLCASVPLFEQKga--vFEVVTHWRTQTIVKYYg---IKSKYYSVNehdfRLTLKSG--RVLGFVQTPy-LHFP 140 Desulfosporosinus ...
Feature 1                     #    #                       #                      #           
2OHH_A    154 DSMFTLLDedGILFSNDAFGQHLCc-pQRLDreipeyiLMDAARKFYANLit-pLSKLVLKKFDEVKELglleriQMIAP 231 Methanothermobacte...
ABI15618  147 ECGFVFDRtsATLFCGDLFTQPGTgdaALVEt-----dILEPSEAFRRQMdyyaHGRDTPGVIEKLAQLe----pRRLAC 217 consortium cosmid ...
EFH88257  139 SLMVVDETt-HSLFPADLFGQPGDq-pAIVRe-----dLSKLECQWHRENglfaAAEPVLHVADRLEKLn----lQWVHP 207 Ktedonobacter race...
EHQ05165  173 GSMVSYDIntESLFSSDIFAVFNRn-wSLFAdt----sYIEHAKSFLEHYv--eSEASLQFAYERFKKLs----lKRILP 241 Leptonema illini D...
EUC19278  150 ECGMLFDEttQTLLCGDLFTQGGAelpAVTGa-----dILGPSEAFRRSMdyysHTKHGDAMLERLAALe----pHTLAC 220 Burkholderia sp. BT03
AEA24267  138 DSMLAYDDttRTVFCSDVFISLGEg-pAVTDr-----dESDAMLDAYRMIgifpSKRHLDSALDKIEATd----pMTLAC 207 Pseudonocardia dio...
EGG99429  147 GAIVTYDPksKSLFTGDIFGAVDDn-wSMFAgg---dnFPQVMASFHQAYm--pANSHLKKAMEKLEKMd----iERILP 216 gamma proteobacter...
ABQ54240  150 DCGFLFETttKTLFCGDLFTQPGAehqPITEe-----dILESSEMMRQAMdyyaHSNNQRQLFEKLASTh----pKILAC 220 Legionella pneumop...
EQA52962  146 GAMITYDVksKVLFTSDILGGLGNe-wALYHda----rALDNMKAFMQAYi--pSNLALRYALLRIQSFd----aDVIAP 214 Leptospira kmetyi ...
AFM42295  141 GAIATYDYssKTLFSSDLFGAFSYg-wSLYAge----dYLEKMKTFHEHYm--pSNDILRPVMEVFLGMd----iSMIAP 209 Desulfosporosinus ...
Feature 1      #                            
2OHH_A    232 SHGQIWt----------dPMKIIEAYTGWA 251 Methanothermobacter thermautotrophicus
ABI15618  218 MHGSAWsg--------dgAALLRSLGRSLA 239 consortium cosmid clone pGZ1
EFH88257  208 MHGGSL------------PGEILPHYIHGL 225 Ktedonobacter racemifer DSM 44963
EHQ05165  242 QHGGIIvd---------eIDQFLDLLKEAR 262 Leptonema illini DSM 21528
EUC19278  221 MHGSAW------------QGDGAALLRALA 238 Burkholderia sp. BT03
AEA24267  208 HHGSVKggrgvhgylramRENDVTGLTEWN 237 Pseudonocardia dioxanivorans CB1190
EGG99429  217 QHGSVIeg--------dqVQVAIDFLKELP 238 gamma proteobacterium IMCC2047
ABQ54240  221 MHGSAWkg---------nGFQLINALADRV 241 Legionella pneumophila str. Corby
EQA52962  215 QHGQIIrk--------eqLPAIIDELWNLP 236 Leptospira kmetyi serovar Malaysia str. Bejo-Iso9
AFM42295  210 QHGSIIrn---------nVTKYIKALRDLE 230 Desulfosporosinus acidiphilus SJ4

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