Conserved Protein Domain Family
DUF1616

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pfam07760: DUF1616 (this model, PSSM-Id:400218 is obsolete and has been replaced by 429642)
Protein of unknown function (DUF1616)
This is a family of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Statistics
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PSSM-Id: 400218
Aligned: 70 rows
Threshold Bit Score: 162.412
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Halru_0233     26 VVLAIATPVATLAPVLRETPVWIPLVPVFVLFLPGYALVAALFPAasdtshgtavdgttesttavgettptgtgddqvds 105 Halovivax ...
Q12XZ6             17 VVFAMLAVIFILVPPLNETPLRIFFALPLIFFIPGYTFIAMMFPK----------------------------------- 61  Methanococ...
HusnBIG:Mpsy_0746  17 LVLSFLSIVFILVSPLNETPLRIVFALLMIFFIPGYAFISALFPG----------------------------------- 61  Methanolob...
BAI62618           39 IVLAFLALTSIYIPQIKGTALMTILGLFVVVVAPGYALVAALFPG----------------------------------- 83  Methanocel...
Q0W4D8              9 LGFSALAFLSIYLPIINETILRSALGHAMVLFVPGYAFIAALFPN----------------------------------- 53  uncultured...
BAI60942           30 VLFTVITLAFIYVPIINESIIRSALGLIMVLFIPGYALIAALFPG----------------------------------- 74  Methanocel...
BAI60855           30 LGFNILMLACIYLPILNETMIRPIAGTIMVLFIPGYSLAAALYPG----------------------------------- 74  Methanocel...
Q0W3D2             33 LGLAIILLVFIYVPFLSHNVIRFALGLVMVLFLPGYAFIAALYPG----------------------------------- 77  uncultured...
Q0W7D0             31 ILISVLMIVLTYTPFFSDSIFRAILAFPATLFAPGYAMVTAMFPR----------------------------------- 75  uncultured...
HusnBIG:Mpsy_0503  14 VAGLLLANLFVFIPLLNTLELRILPGILIVLFLPGYAMVAALFPG----------------------------------- 58  Methanolob...
jgi:Halru_0233    106 srrigvtagvdRPRIDGIERVALSFALSVAIAPLIGLGLSVTPWGIELEPILVTMTLFSFLAVIVAAVRRSRLPTDDQFR 185 Halovivax ...
Q12XZ6             62 -----------KGDISNIERFTLSVGFSIAITVFDGFAVSLTQWLFRPNSISISLLLLTAIFALLAYIARRRHPEEDQFT 130 Methanococ...
HusnBIG:Mpsy_0746  62 -----------NREISGIERFTLSVGFSIVIMVFDGFIISVTQWKFRPDSITISLALLTFAFVFLAYLSRSRLPQEEQFS 130 Methanolob...
BAI62618           84 -----------KAAINGNIRIVISLGMSVIITALIGLVLNFTAWGIRLEPVAISLSYFSIIVALIANMRRLGLNEEDRQS 152 Methanocel...
Q0W4D8             54 -----------RKDLDGIERAALSFGLSIAVVPLIGLGLNFTPWGIRLDPIVVALAIFTLLCVLVANRRRHELPVEDRFN 122 uncultured...
BAI60942           75 -----------KKDIDGIERTALSFGLSIAVSPLIGLGLNYTPWGIRLDPIVVCLSIFTFICMLVANKRRHELPVAERFG 143 Methanocel...
BAI60855           75 -----------KADIDTVERIALSFGLNLGIMPIAVLLANFTPWGIHLGPIVAILTILTILFILVAVMRRRRIPADERFS 143 Methanocel...
Q0W3D2             78 -----------KEDLGNLERAVLSVGLSIILVPFTGYILNYTIWGITLNSILLSVTALLLVCLLVAFVRRQWLPAEKRFM 146 uncultured...
Q0W7D0             76 -----------RSDMGNIARMTMSVTLSIIIVPLIGMALNYTFLGVHLDPILICVTIFTLACSALAIVSRFKVPADEMF- 143 uncultured...
HusnBIG:Mpsy_0503  59 -----------KDDISGAERIVFSIGLSVALVPFIGYGLLYTSWGMGTGPLMISISVVTLVMCIVALFRRQRLPEGAAFF 127 Methanolob...
jgi:Halru_0233    186 VPSRAWSGGIYRAFFE--PDsr---------------------------------------------------tDALLNV 212 Halovivax ...
Q12XZ6            131 FSVHGFIESIRSDDENipKKdrip-----------------------------------------------peiEKALII 163 Methanococ...
HusnBIG:Mpsy_0746 131 FSYAAFIRSLKEEEND--DEeldgaeeyeqdiplpgnkkfkaktrtkisavktaperktprseknipdrippavTKALMI 208 Methanolob...
BAI62618          153 PHIRETISLIFGEAFPk-EVrf---------------------------------------------------sDKVVTF 180 Methanocel...
Q0W4D8            123 IDFGRAYADIKGELFPa-SEsr---------------------------------------------------lDRILTV 150 uncultured...
BAI60942          144 IDFVGVYHQFRGEVFSe-DKtk---------------------------------------------------lDKALTV 171 Methanocel...
BAI60855          144 IDIGGAYQDLKRSLIFtd------------------------------------------------------rkPQYLTF 169 Methanocel...
Q0W3D2            147 VDFRGPVEQAKKLVLPa-SKdr---------------------------------------------------sDTIISG 174 uncultured...
Q0W7D0            144 --YPDIPAAVKSLFWG--DRsq---------------------------------------------------iDKVLGI 168 uncultured...
HusnBIG:Mpsy_0503 128 VPYGS-FPRLPVDYSLqgKRsr---------------------------------------------------lENALTL 155 Methanolob...
jgi:Halru_0233    213 FLALAVVFAFA-AVGFAAVAPQQGERFSAIYLLGEDSdgelGTGNFTTELTRGEPVELVVGVDNHEHERTSYEVVVLEQE 291 Halovivax ...
Q12XZ6            164 ALVGSIIIASG-MLVYAKVT-QEKEQFTALYILGPEG----MAENYPTNASIENPLKVTVGIENYEKQDVDYILQMRLD- 236 Methanococ...
HusnBIG:Mpsy_0746 209 AMVLSIIIAGA-MFVYAKET-REKETFTALYILGDGG----KAENYPSTLSMTQPTSIIVGIENYEHENVNYILRVRLD- 281 Methanolob...
BAI62618          181 VFLVSMVLSIT-AIGYVIVFPQNGEKYTEFYILGPDG----IAENYTTNFRLGDNGTFIVGVVNHEQKSLAYNVRVVMNN 255 Methanocel...
Q0W4D8            151 ILLISIVASIL-VLAYVFVVPKQGEKFTEFYILGPNG----KAENYPTRFISGESKPVIVGIVNHEYRNVTYDLVVALND 225 uncultured...
BAI60942          172 VLIISILLSIA-TLAYVIAVPKQGEKFTEFYILGPDG----KADNYPTKYTLGDQKPVIVGIVNHEYRNVTYDLVVALND 246 Methanocel...
BAI60855          170 LVTSVIIIAICfTLAYFLLTPGRTDNFTEFYILGPGG----RMKDYPTDFYLGSGQPIIVCIANHEHKTVDYSLVISVNG 245 Methanocel...
Q0W3D2            175 LLICSLLLILS-VIGYLVVMPYQADRYTEFYLYGPEG----KMSNYPTNFTLGEKKPLIIGIVNKEGMSKEYDLAVTLTD 249 uncultured...
Q0W7D0            169 AIVAALLVSAG-TVSYMVFMPGQVEQFTEFYLTGPEH----NIGGYPSDFVLGEQLPVIVGIVNHEKREMTYDLQIQLVD 243 uncultured...
HusnBIG:Mpsy_0503 156 LLLASVLVSAV-TVAYVIINPRLGEGFTEFYLLGPDG----TSSGYPTSLNAGDSGQVTVGVVNQEERTVDYQLAVLLDG 230 Methanolob...
jgi:Halru_0233    292 LafetgeepgpegapignqstvTDAtvtdQRELDRFNTTLSHDETWHHPHTVEPTV-TGENVRLVWLLFPDdtvpsePSM 370 Halovivax ...
Q12XZ6            237 -----------------------------GKVLQTLNITLSDEEKWEDELTYKPEQiRVGRSKLEYALFKE------EIS 281 Methanococ...
HusnBIG:Mpsy_0746 282 -----------------------------GTVLGQREISLQHKEKWEQELQLKPEAyKQGRQRLDFLLYKE------TAT 326 Methanolob...
BAI62618          256 G---------------------FDQ-----STLYTDQFTLANDQTLEKAARISPDI-TGTNMKLQFFLYAD------GNM 302 Methanocel...
Q0W4D8            226 S---------------------RQI-----TRLYTQQVTIADNQTWERQIDIAPDR-PGTSMKLEFLLYAD------GNM 272 uncultured...
BAI60942          247 S---------------------ATI-----SNIYTEQLTLGDNQTWEKKIDLKPDR-VGTNMKMEFLLYAD------GNK 293 Methanocel...
BAI60855          246 S---------------------ANV-------IYSEQIPLGDNQTWEKTIMLRPRT-TGSNMKMAFSLYDD------GPS 290 Methanocel...
Q0W3D2            250 G---------------------NQS-----HRIFLDHMVLADNETLEKTIYLAPDR-VGNMQNMRFLLYME------GSP 296 uncultured...
Q0W7D0            244 N---------------------NTT-----TVLSTERVVLGDNQTWEKTAQIKPDR-LGTRMKLDFLLYAD------GNT 290 uncultured...
HusnBIG:Mpsy_0503 231 N---------------------PLP-----LQAQEENIRVGNNERWERTVSFAPEV-SGNNMKLQFLLYKD------ADL 277 Methanolob...
jgi:Halru_0233    371 ADAEYSVFRWV 381 Halovivax ruber XH-70
Q12XZ6            282 FNPYRSVHLWI 292 Methanococcoides burtonii DSM 6242
HusnBIG:Mpsy_0746 327 GGAYRSVHLWV 337 Methanolobus psychrophilus R15
BAI62618          303 SSPYRECHVWV 313 Methanocella paludicola SANAE
Q0W4D8            273 TAPYRDLHLWI 283 uncultured methanogenic archaeon
BAI60942          294 TAPYRECHLWV 304 Methanocella paludicola SANAE
BAI60855          291 STPYRECDLYV 301 Methanocella paludicola SANAE
Q0W3D2            297 ADPYRECNLWV 307 uncultured methanogenic archaeon
Q0W7D0            291 AIPYHQCRLWI 301 uncultured methanogenic archaeon
HusnBIG:Mpsy_0503 278 SEPYRELYLWI 288 Methanolobus psychrophilus R15
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