Conserved Protein Domain Family
AmtB

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COG0004: AmtB (this model, PSSM-Id:223083 is obsolete and has been replaced by 439775)
Ammonia channel protein AmtB [Inorganic ion transport and metabolism]
Statistics
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PSSM-Id: 223083
Aligned: 58 rows
Threshold Bit Score: 278.308
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1723171    1 MTSIDTLWLLLCAGLVFFMQ---AGFMCLESGLTRSKNSINVAIKNFADFGISVALFWSFGFSIMFGl------SQGGWW 71  Synechocystis sp. P...
15616396   4 IALMDNVWIMLCAVLVLLMQg---GFILLEAGSTRMKNAGHIAGKTIFTVGIASLVYWAVGWGFTYG-------EGNAFI 73  Bacillus halodurans
2492880    7 MDGIDVFFFMWAASLIFFMK---AGFIALEIGQFRAKNVSYHCVLKLLDLAAVFIAYLFIGYGISYG------------F 71  Methanocaldococcus ...
2492881   29 anASDVFFLVVMGVLVFMMQ---WGFAMLEGGQVRKKNVNNVMMKNMVDWLIGCVAWLFIGGILCSKg-----fDLSAFI 100 Methanocaldococcus ...
20093493  20 qgPGAIFFLVWAAVLVVGMQ---LGFMFLEAGQVRTKNVVSVLMKNLLDLSLGGIVFIFFGFALAFP-------DYAQSI 89  Methanopyrus kandle...
15598235  70 IHGSNTLFILLGAVMVLAMH---AGFAFLEVGTVRLKNQVNALSKILSDFAISALAYFFVGYWIAYG---------VTFF 137 Pseudomonas aerugin...
13541873   2 IQLLNNLWVLFSAFLVFLMTiavGFLEYGELGIALKRSLYKTILITGIAFVVMAVIGFNTAFAPTLYgiignplYKPGFV 81  Thermoplasma volcanium
16082494     --------------------------------------------------------------------------------     Thermoplasma acidop...
17228485  58 QISIDTTWVLLSGFLVFFMQ---TGFAMLEAGLVRQRSVVNTLLENFIDAAVTVLAWWAVGFGIAFGt------SAGGLF 128 Nostoc sp. PCC 7120
3024960   38 TYAINNLFLLAAAVLVLFMQ---AGFAMLEAGLSSHKNTVNVLFKNTFDVCVGVLLYFLFGYSLMYGe--------NPVL 106 Synechocystis sp. P...
1723171   72 GT----------GYSFVDVGG------EPTLAVFFLFQAMFCGTATTIISGAAAERLKFSAYLLVAGLASGLIYPLFG-D 134 Synechocystis sp. P...
15616396  74 Glsdf----ffgDYSTAEEG--------LVGSVDFFFQLMFAAIALTIAFGGFAERAKLSVYILFAVLFSAFVYPIVA-H 140 Bacillus halodurans
2492880   72 ENimpl-----itgTFDADLG-----------AWWMKMVMFAAAAVTIITGGVAERIKILPYFIGALIVGGILYPIVE-H 134 Methanocaldococcus ...
2492881  101 DWwkqi---lgtN--WPNN---------GLDLASWFFGLVFCATAATIVSGGVAERIKFSAYVLISLIITGLLYPLFVyL 166 Methanocaldococcus ...
20093493  90 GKwiat---mftANPWSADPMka---aDPYNLAYCFFQFAFCATAATIVSGAVAERINFKACLVMTVLITGLLYPIFV-L 162 Methanopyrus kandle...
15598235 138 HP----------AAALTVDSG--------YALVKFFFLLTFAAAIPAIISGGIAERARFGPQLCATALIVAFVYPFFE-G 198 Pseudomonas aerugin...
13541873  82 LGylnsptamfsTIWWATSASyf--ntGLLGITYFLFETAFASVTLALVSVVILRKVKMSVFVVFSIVYFIVIYNLPA-A 158 Thermoplasma volcanium
16082494   1 ---------metVAVKLTGTKff--dtGLSTGTYFLFETAFASVTLALVSVVVLRKMKMSAFMLFSIIYFIFIWTIPA-A 68  Thermoplasma acidop...
17228485 129 Gidtff-lsqlpGADGSYPLGapgstaAINTYTLFFFQFAFAATASTITTGSMAGRTDFIGDLIYSAIMGAISYPIIV-H 206 Nostoc sp. PCC 7120
3024960  107 GGffg-----wgGFGITNNLDnv---eGLSPQVDWLFQAAFAATAATIVSGAVMGRMYFKAYLIYSAVITGLVYPISG-H 177 Synechocystis sp. P...
1723171  135 WAWNGLAtvagiettggWLENLG---FRDFAGSTVVHSVGAWIGLATILVVGPRQGrfpktGKTLKIQGSNMPFSVLGTL 211 Synechocystis sp. P...
15616396 141 WIWGDG-----------WLADLG---KQDFAGSTVVHLTGAMGALAATILLKPRLGkynkdGSMNDIQGHNQVYTALGVL 206 Bacillus halodurans
2492880  135 LVWGGG------------FANLGi-nFHDYAGSGAVHLFGGLVGLMAAYVLGPRIDky-inGKPQAIPGHNIPIAVLGAF 200 Methanocaldococcus ...
2492881  167 GPWG--------------ASIVp---WHDYAGSLVVHGLGGFLALGAIAALGPRIGrf-vdGRPVPILGHNIPMAVFGAF 228 Methanocaldococcus ...
20093493 163 WTWGGGwmgg---dtglFAKVFGq-pYHDFAGSTVVHAIGGFLAMAAAYLLGPRIGrf-knGKPVPIPGHNIPQAFLGAL 237 Methanopyrus kandle...
15598235 199 LVWNGNFgl------qeWLKLEFgapFHDFAGSVVVHALGGWLALAAVLLLGSRNGry-rdGKLVAMAPSSIPFLALGSW 271 Pseudomonas aerugin...
13541873 159 WIWNPTG----------WLYLLG---MRDFAGGLVVHGAAGFAGLAIIIRIWQEERkkgivRSPGEIIKVNDGFLTLAIL 225 Thermoplasma volcanium
16082494  69 WIWNPTG----------WLYKLG---VRDFAGGLVVHVASGFAALAIMVRIWQEEKkmglkESKKENLNLNSGWLTLSII 135 Thermoplasma acidop...
17228485 207 WAWNSNG----------WLGKLS---YHDFAGGSIVHTVGGWTALVGAYLLGPRPDr---pPWGKLPPAHNLALATLGTM 270 Nostoc sp. PCC 7120
3024960  178 WKWGGG-----------WLDKLG---FHDFAGSLLVHSVGGFAALAAVVVMGPRIGrf-egNKINSLGYQGITSSSLGVF 242 Synechocystis sp. P...
1723171  212 ILWFGWLGFNGGSTFGLT-----PEVPGIMVNTVLAGVGGMLMAGLISLLQ--DKMIQVEPLMNGSLAGLVAITASANVV 284 Synechocystis sp. P...
15616396 207 LLWVGWFGFNAGSTLEVAd----AFFGYVALNTQLAAAAGAVAAMFIAWALs--GKADVPTTLNGALAGLVAITASCAFV 280 Bacillus halodurans
2492880  201 ILAFGWYGFNIGSASGIAn---gVELASVAMATTMALAGGIIGGALSS-------RNDPLYTANGMCAGLVAVCSGVDLF 270 Methanocaldococcus ...
2492881  229 ALAIGWYGFNVGSSLALGdi-----sGLVCATTTMAMAGGGIGALIAS-------RNDVLFTANGIVAGLVAICSGTDVV 296 Methanocaldococcus ...
20093493 238 FLAITWYGFNVGSSAVLYdp--tNESWISSLVATLAMCGGAAAAAFTT-------RFDPLWAANGLIAGLVAICAGCDIM 308 Methanopyrus kandle...
15598235 272 ILIIGWFGFNVMSAQTLA-----GVSGLVAVNSLLAMVGGTMASLLIG-------RNDPGFLHNGPLAGLVAVCAGSDLM 339 Pseudomonas aerugin...
13541873 226 LLMMGWFGFNPGSVLAFN-----YDTLIVVMTTFMAALTSMLSTLTVSYLLy-KDAGGIMNAVNGILMGLIIVTPLAGFV 299 Thermoplasma volcanium
16082494 136 LLWVGWFGFNPGSELAFT-----TETVIVVITTFLAAASAMVSTMLTKFLVs-KQDPGLIYAVNGVLMGLIVITPLAGYV 209 Thermoplasma acidop...
17228485 271 ILWFGWYGFNPGSTLGTAn---pGLIGLVTINTTLAAGAGALAALIFLYVR--TGKWDLVYCLNGSLAGLVAITAPCAYV 345 Nostoc sp. PCC 7120
3024960  243 ILWVGWYGFNPGSQLAFVgalntNTTMLIAVNTTLSAAAGGLAALAFDWITenKRKPNLLVTLNGILGGLVGITAGCDTV 322 Synechocystis sp. P...
1723171  285 MTPIAMVIGATGSAIAYLVGKKMLH-WGVDDAVDAVAVHGGAGVWGTLCVGLFGQLP-------------LVDTGLN--- 347 Synechocystis sp. P...
15616396 281 APWAAVVIGIVGGLIVYFSMKFFDK-AKIDDPIFALSVHGVAGVWGTLSTGFFATPela--------emnGGQAGLFygg 351 Bacillus halodurans
2492880  271 TPIGAFIVGLLAGIQQPFTYKFIEEkLKIDDVCAIGPVHAMSGLIGVICAGIPFLLK---------------ADAVs--- 332 Methanocaldococcus ...
2492881  297 SPIGGLIIGLIAGLQVPIVYKLVEK-AGLDDVCGVVPVHGTAGVIGAILTGILGLk---------------IFGGA---- 356 Methanocaldococcus ...
20093493 309 SPFGALLTGIVAGLIIKPAFRLLEK-LEIDDVVAACPVHGFAGVWGAIAAGIFGAe---------------ALGGA---- 368 Methanopyrus kandle...
15598235 340 HPIGALATGLVAGALFVWAFTATQVrWKIDDVLGVWPLHGLCGVWGGIACGIFGQQa--------------LG-Gl---- 400 Pseudomonas aerugin...
13541873 300 SPLSAAILGILGGPIFIFANRFFSKrKWFSDPVGLFSGHFTGGIFGVLMIGFFTQHSyavlsgnsilpngLFFGGGy--l 377 Thermoplasma volcanium
16082494 210 SPGSAIILGLISGPIFVSAESIFSKhKWYSDPIGVLPGHMVGGIFGLLMIAFFTQTPfadasgasnlpngILFGGGi--m 287 Thermoplasma acidop...
17228485 346 APWASVLIGLTGGIAVVLGVSLIES-LHIDDPVGAFSVHGISGMMGTLSIGFLGQEElt----------lnQKAGLLlgg 414 Nostoc sp. PCC 7120
3024960  323 SNWSAIAIGVVAGILSVLGTKLLDR-LRIDDGVGAWPVHGLCGIWGGIAVGIFSTN------------------------ 377 Synechocystis sp. P...
1723171  348 RWQQCGVQLLGIGVCTLWAFGLAWVFLTLLNRVFA--LRISPEDEEIGLNVSEHQATteTYELFQVMD 413 Synechocystis sp. PCC 6803
15616396 352 GFAQLGVQTLSVVACGVFAFIASYVLLLVCKSVLGg-LRVTEEEEIIGLDLSEHGSY--GYPESMPGS 416 Bacillus halodurans
2492880  333 KVSITG-QIIGAIVIALIAIVGGLIIYKGLDLTIG--LRVSEEAEKVGLDTAILQTT--AYSEE---- 391 Methanocaldococcus jannaschii
2492881  357 GGVSLIDQIIGAVFCIIYGTGLGYILAKIVGIALGg-LRVSEEEEKMGLDMAEHKMP--AYP-EETVI 420 Methanocaldococcus jannaschii
20093493 369 GGVSLAAQIVGALVCIAWALGSGFATFYVIDKVIG--LRATEEEEK-GLDETEFGVS--AYPYMETRD 431 Methanopyrus kandleri AV19
15598235 401 GGVSLASQALGSLLGVTVAFAGGLLVYGLMKALLG--IRLSQEEEYYGADLSIHKIG--AISHE---- 460 Pseudomonas aeruginosa PA01
13541873 378 ALHTLGIEIMGICAVGLAVFAISYATMYFLSLGFHgiLEEPEWKKEERKSLPSSETS--K-------- 435 Thermoplasma volcanium
16082494 288 ALHQLGLEAMAVVVVGAFVFTVSYASVYAISLLLNgiLRDSEYSPARPANRLAKDTG--A-------- 345 Thermoplasma acidophilum
17228485 415 GFDLLGIQMLGIVAITVFTVAFAFLMYGGLKAMGH--LRVNAEADRIGIDTYEHGAS--VWPDVYSVE 478 Nostoc sp. PCC 7120
3024960  378 VEHKLSAQIVGSLVIPFWAFITMFFLFYVMDLWGI--LRVKPSQEKVGLDIVEHGQT--EKGVEIAFE 441 Synechocystis sp. PCC 6803
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