2A5V,1YM3


Conserved Protein Domain Family
beta_CA_cladeC

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cd03378: beta_CA_cladeC 
Click on image for an interactive view with Cn3D
Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Statistics
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PSSM-Id: 239473
Aligned: 45 rows
Threshold Bit Score: 188.117
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1:zinc binding site [ion binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                    # #                              
2A5V_D     12 PVAAWKALKEGNERFvagrpqhpsq--svdhraglaaGQKPTAVIFGCADSRVAAEIIFDQGLGDMFVVRTAGHVIdsaV 89  Mycobacterium tube...
NP_442201  77 PQQLLTELMEGNGRFaaqkrvkanq--dlyrlaevaqGQNPFAAILSCADSRVPPEIIFDQGLGDLFICRIAGNVAtpqE 154 Synechocystis sp. ...
CAG35579   11 ADEILEILQEGNARFrccalehpnl--cqesrdklnySQEPMATVLCCSDSRVPPVHIFDLGLGDLFVVRVAGNIVndqI 88  Desulfotalea psych...
NP_295960  64 PEAAIQTLMEGNARFfggqarrpdi--ganerraqiiGQTPYAAILACSDSRVPVELVFDQGLGQLFVVRVAGNVVgesG 141 Deinococcus radiod...
AAW79303   94 PVQILEELKAGNARFaageqsyptp--slvarrefsrGQVPKVMVIGCADSRVPIEILFDQGIGDVFVSRNAGNLFddkV 171 Pavlova lutheri
AAW79300   88 PKEVLVELQRGNARFwmgaatrpek--saferralisKQFPSVAVLGCSDSRVPVEIVFDQGLGDLFVVRVAGNALdmsT 165 Heterocapsa triquetra
EAL51300    6 PQQALTFLLDGNNRFvegktitynf---eerrkelvnKQEPIATIICCSDSRAPPEYLFNVNFGDIFVVRSAGGVIgqtE 82  Entamoeba histolyt...
AAK81867    4 AQEALSRLKQGNQRFvagetthhkql-shqaraemaeDQNPFAIVLGCSDSRVPAEMVFDQGLGDLFVIRVAGNVVapsQ 82  Streptococcus sp. ...
CAG67944    4 AQEALDRLKAGNQRFvkgdtthprll-shqeraemaeAQNPFAIILGCSDSRVPAEQVFDQGLGDLFVIRVAGNIVapsQ 82  Acinetobacter sp. ...
AAC49888   81 PDQALEYLREGNKRFvnnkphdshptrnldrvkataaGQKPFAAFLSCADSRVPVEIIFDQGFGDVFVTRVAGNIVtneI 160 Chlamydomonas rein...
Feature 1                         #  #                                                        
2A5V_D     90 LGSIEYAVTVLNVPLIVVLGHDSCGAVNAAlaaindgtlpggyvrdvve------rvapsvllgrrdglsrvdeFEQRHV 163 Mycobacterium tube...
NP_442201 155 VGSLEFGTLVLGAKVLMVLGHQGCGAVKAAmdggdlpgqigsvikki----------digsvtddssnaasvvmATKANV 224 Synechocystis sp. ...
CAG35579   89 MGSIEYAICHLHTPLVIVMSHSNCGAVTAVakgtnlgghmaslvpai----------qtalktvegmeggrvdnAAQQVA 158 Desulfotalea psych...
NP_295960 142 LGTLEYAIRHLDVHLVMVMGHEGCGAVAAAlmpddkiaeepphlqsligr----irpsvenlpairdkkarmreAVINNV 217 Deinococcus radiod...
AAW79303  172 GGTLDYAVNHLGIRLVVVMGHEACGAVRAAglstsalmrepphlramllgmqrelalckesldaiaepstreraTVIANA 251 Pavlova lutheri
AAW79300  166 TASLQFAVNHLKVKVVVVMGHEACGAVKAAglpikaiegepealckclkgl--kagldldrldkikdprardreAVVENV 243 Heterocapsa triquetra
EAL51300   83 LGSVEYGVTHLKTPLIVVLSHTSCGACTAAcqrahsenalsails--------------dlipiaekcnndihsTCIQSA 148 Entamoeba histolyt...
AAK81867   83 VGSVEFAAERYDCAVVVVLGHSHCGAIQATidtlmnpdsppsanlmsivnrvrpsvetlmqtelkhdlcklskhAVRSNV 162 Streptococcus sp. ...
CAG67944   83 VGSVEFAAERYDCAVVVVLGHSHCGAIQATvdtlldpenppsdnlmsivnrvrpsveillqtdlkhdhkklcmhAVRSNV 162 Acinetobacter sp. ...
AAC49888  161 TASLEFGTAVLGSKVLMVLGHSACGAVAATmngaavpgvisslyys-------------ispackkaqagdvdgAIAENV 227 Chlamydomonas rein...
Feature 1                                             
2A5V_D    164 HETVAILMARSsaiseriagGSLAIVGVTYQLDDGRAVLR 203 Mycobacterium tuberculosis H37Rv
NP_442201 225 EHQMAVLIQSPvlsq-liaeERLLIMGAYYNLESGIVTLL 263 Synechocystis sp. PCC 6803
CAG35579  159 LLMADLIRESEpiisdlvleGKVKVVPAYYDLTTGKVEFL 198 Desulfotalea psychrophila LSv54
NP_295960 218 RRQVALLRRQAviqe-aeasGQIRVIGGYYEIGSGAVDFL 256 Deinococcus radiodurans
AAW79303  252 VGQARKILEDPlvha-khtdGKLLVVAAYYEITTGLVQFI 290 Pavlova lutheri
AAW79300  244 YAQVAGLKQDAgmmd-kvakGEIIIVGAFYEISSGIVDFF 282 Heterocapsa triquetra
EAL51300  149 VQHAEFLRSNPllqp-likqGQCNIVSMIYNIETGKCEVV 187 Entamoeba histolytica HM-1:IMSS
AAK81867  163 FASVNQLRHGSavlesliakGKLQVVGAEYSLESGEVVFF 202 Streptococcus sp. (N1)
CAG67944  163 FASVNQLRHGSavlesliakGKMIVVGAEYSLETGEVNFF 202 Acinetobacter sp. ADP1
AAC49888  228 KVQMEQLKVSPvlqg-lvkeGKLKIVGGVYDLATGKVTEI 266 Chlamydomonas reinhardtii

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