1E6V


Conserved Protein Domain Family
McrA

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COG4058: McrA (this model, PSSM-Id:226544 is obsolete and has been replaced by 443235)
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Methyl coenzyme M reductase, alpha subunit [Coenzyme transport and metabolism]
linked to 3D-structure
Statistics
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PSSM-Id: 226544
Aligned: 7 rows
Threshold Bit Score: 1055.21
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1E6V_A     1 MSSAEEKLFMKALKEKFE-ESPEEK--------YTKFYIFGGWKQSERKKEFKEWADKIVEERG-VPHYNP--DIGVPLG 68  Methanopyrus kandleri
20093330   1 MAADIFAKFKKSMEVKFTqEYGSNKqaggditgKTEKFLRLGPEQDARKQEMIKAGKEIAEKRG-IAFYNPmmHMGAPLG 79  Methanosarcina acet...
2497836    1 -MDVEKKLFLKALKEKFE-EDPKEK--------YTKFYIFGGWRQSARKREFVEFAQKLIEKRGgIPFYNP--DIGVPLG 68  Methanocaldococcus ...
3915769    1 -MDAEKRLFLKALKEKFE-EDPREK--------YTKFYVFGGWRQSARKREFVEAAQKLIEKRGgIPFYNP--DIGVPLG 68  Methanocaldococcus ...
20094923   3 ERSKEEALFIKALKEKFE-EDPEEK--------HTKFYVYGGYRQSPRK-EFAKGALREFEPAG-ERDLIV--PAE---- 65  Methanopyrus kandle...
6686311    1 -MD-EKKLFLTALKKKFEvEDPDEK--------YTNFYCFGGWEQSARKKEFTEYAKKAAEKRGgIPFYNP--DIGVPLG 68  Methanothermobacter...
3334250    1 MADKLFIN---ALKKKFe-ESPEEK--------KTTFYTLGGWKQSERKTEFVNAGKEVAAKRG-IPQYNP--DIGTPLG 65  Methanothermobacter...
1E6V_A    69 QRKLMSYQVSGTDVFVEGDDLTFVNNAAMQQMWDDIRRTVIVGMDTAHRVLERRLGKEVTPETINEYMETLNHALPGGAV 148 Methanopyrus kandleri
20093330  80 QRAITPYTISGTDIVAEPDDLHYVNNAAMQQMWDDIRRTCIVGLDMAHETLEKRLGKEVTPETINHYLETLNHAMPGAAV 159 Methanosarcina acet...
2497836   69 QRKLMTYKISGTDAFVEGDDLHFCNNAAIQQLVDDIKRTVIVGMDTAHAVLEKRLGVEVTPETINEYMETINHALPGGAV 148 Methanocaldococcus ...
3915769   69 QRKLMPYKVSNTDAIVEGDDLHFMNNAAMQQFWDDIRRTVIVGMDTAHAVLEKRLGVEVTPETINEYMETINHALPGGAV 148 Methanocaldococcus ...
20094923     --------------------------------------------------------------------------------     Methanopyrus kandle...
6686311   69 QRKLMAYRVSGTDAYVEGDDLHFVNNAAIQQMVDDIKRTVIVGMDTAHAVLEKRLGVEVTPETINEYMEAINHALPGGAV 148 Methanothermobacter...
3334250   66 QRVLMPYQVSTTDTFVEGDDLHFVNNAAMQQMWDDIRRTVIVGLNHAHAVIEKRLGKEVTPETITHYLETVNHAMPGAAV 145 Methanothermobacter...
1E6V_A   149 VQEHMVEIHPGLTWDCYAKIITGDLELADEIDDKFLIDIEKLFPEEQAEQLIKAIGNRTYQVCRMPTIVGHVCDGATMYR 228 Methanopyrus kandleri
20093330 160 VQEMMVETHPALVDDCYVKIFTGDDELADEIDKQYVINVNKMFSEEQAAQIKASIGKTTWQAIHIPTIVSRTTDGAQTSR 239 Methanosarcina acet...
2497836  149 VQEHMVEVHPGLVWDCYAKIFTGNDELADEIDKRFLIDINKEFPEEQAEQIKKYIGNRTYQVSRVPTIVVRCCDGGTVSR 228 Methanocaldococcus ...
3915769  149 VQEHMVEVHPALVWDCYAKIFTGDDELADEIDKRFLIDINKLFPEEQAEQIKKAIGKRTYQVSRVPTLVGRVCDGGTIAR 228 Methanocaldococcus ...
20094923     --------------------------------------------------------------------------------     Methanopyrus kandle...
6686311  149 VQEHMVEVHPGLVEDCYAKIFTGDDNLADELDKRILIDINKEFPEEQAEQLKSYIGNRTYQVNRVPTIVVRTCDGGTVSR 228 Methanothermobacter...
3334250  146 VQEHMVETHPALVADSYVKVFTGNDEIADEIDPAFVIDINKQFPEDQAETLKAEVGDGIWQVVRIPTIVSRTCDGATTSR 225 Methanothermobacter...
1E6V_A   229 WAAMQIAMSFICAYKIAAGEAAVSDFAFASKHAEVINMGEMLPARRARGENEPGGVPFGVLADCVQTMRKYPDDPAKVAL 308 Methanopyrus kandleri
20093330 240 WAAMQIGMSFISAYAMCAGEAAVADLSFAAKHAALVSMGEMLPARRARGPNEPGGLSFGHLSDIVQTSRVS-KDPAKIAL 318 Methanosarcina acet...
2497836  229 WSAMQIGMSFITAYKLCAGEAAIADFSYAAKHADVIQMGMILPARRARGPNEPGGVPFGIFADIIQTSR-VSDDPAQVTL 307 Methanocaldococcus ...
3915769  229 WSAMQIGMSFITAYKLCAGEAAIADFSYAAKHADVIQMASFLPARRARGPNEPGGIFFGVLADIVQTSR-VSDDPVEQSL 307 Methanocaldococcus ...
20094923     --------------------------------------------------------------------------------     Methanopyrus kandle...
6686311  229 WSAMQIGMSFISAYKLCAGEAAIADFSYAAKHADVIEMGTIMPARRARGPNEPGGVAFGTFADIVQASR-VSDDPAKISL 307 Methanothermobacter...
3334250  226 WSAMQIGMSMISAYKQAAGEAATGDFAYAAKHAEVIHMGTYLPVRRARGENEPGGVPFGYLADICQSSRVNYEDPVRVSL 305 Methanothermobacter...
1E6V_A   309 EVIAAGAMLYDQIWLGSYMSGGVGFTQYATAVYPDNILDDYVYYGLEYVEDKYG-------IAEAEPSMDVVKDVATEVT 381 Methanopyrus kandleri
20093330 319 EVVGAGCMLYDQIWLGSYMSGGVGFTQYATAAYTDDILDNNTYYDVDYINDKYNgaanlgtDNKVKATLDVVKDIATEST 398 Methanosarcina acet...
2497836  308 EVIGAAATFYDQVWLGSYMSGGVGFTQYASATYTDDILDDFVYYGMDYVEKKYG-------LCGVKPSMEVVKDIATEVT 380 Methanocaldococcus ...
3915769  308 EVVAAGAMLYDQIWLGGYMSGGVGFTQYATATYTDDILDDFSYYGYDYITKKYGg------CNSVKPTMDVVEDIATEVT 381 Methanocaldococcus ...
20094923     --------------------------------------------------------------------------------     Methanopyrus kandle...
6686311  308 EVIAGAAALYDQVWLGSYMSGGVGFTQYATAAYTDDILDDFVYYGMEYVDDKYG-------ICGTKPTMDVVRDISTEVT 380 Methanothermobacter...
3334250  306 DVVATGAMLYDQIWLGSYMSGGVGFTQYATAAYTDNILDDFTYFGKEYVEDKYglc---eaPN----TMDTVLDVASEVT 378 Methanothermobacter...
1E6V_A   382 LYGLEQYERYPAAMETHFGGSQRAAVCAAAAGCSTAFATGHAQAGLNGWYLSQILHKEGQGRLGFYGYALQDQCGAANSL 461 Methanopyrus kandleri
20093330 399 LYGIETYEKFPTALEDHFGGSQRATVLAAASGVACALATGNANAGLSGWYLSMYVHKEAWGRLGFFGFDLQDQCGATNVL 478 Methanosarcina acet...
2497836  381 LYGLEQYDEYPALLEDHFGGSQRAGVTAAAAGCSVAFATGNSNAGINGWYLSQILHKEYHSRLGFYGYDLQDQCGAANSL 460 Methanocaldococcus ...
3915769  382 LYGLEQYDTFPALLEDHFGGSQRAGVTAAAAGITTALATGNSNAGVNGWYLSQILHKEYHSRLGFYGYDLQDQCGAANSL 461 Methanocaldococcus ...
20094923     --------------------------------------------------------------------------------     Methanopyrus kandle...
6686311  381 LYSLEQYEEYPTLLEDHFGGSQRAAVAAAAAGCSTAFATGNSNAGINGWYLSQILHKEAHSRLGFYGYDLQDQCGASNSL 460 Methanothermobacter...
3334250  379 FYGLEQYEEYPALLEDQFGGSQRAAVVAAAAGCSTAFATANAQTGLSGWYLSMYLHKEQHSRLGFYGYDLQDQCGASNVF 458 Methanothermobacter...
1E6V_A   462 SVRSDEGLPLELRGPNYPNYAMNVGHLGEYAGIVQAAHAARGDAFCVHPVIKVAFADENLVFDFTEPRKEFAKGALREFE 541 Methanopyrus kandleri
20093330 479 SYQGDEGLPDELRGPNYPNYAMNVGHQGGYAGIAQAAHSGRGDAFTVNPLLKVCFADELMPFNFAEPRREFGRGAIREFM 558 Methanosarcina acet...
2497836  461 SIRSDEGLLHECRGPNYPNYAMNVGHQPEYAGIAQAPHAARGDAFCLNPIIKVAFADDNLIFDFKWPRKCIAKGALREFE 540 Methanocaldococcus ...
3915769  462 SFRNDEGSPLELRGPNYPNYAMNVGHQGEYAGITQAAHSARGDAFALNPLIKVAFADPSLVFDFTHPRKEFARGALREFE 541 Methanocaldococcus ...
20094923     --------------------------------------------------------------------------------     Methanopyrus kandle...
6686311  461 SIRSDEGLIHELRGPNYPNYAMNVGHQPEYAGIAQAPHAARGDAFCTNPLIKVAFADKDLSFDFTSPRKSIAAGALREFM 540 Methanothermobacter...
3334250  459 SIRGDEGLPLELRGPNYPNYAMNVGHQGEYAGISQAPHAARGDAFVFNPLVKIAFADDNLVFDFTNVRGEFAKGALREFE 538 Methanothermobacter...
1E6V_A   542 PAGERDLIVPAE 553 Methanopyrus kandleri
20093330 559 PAGERSLVIPAK 570 Methanosarcina acetivorans C2A
2497836  541 PAGERDLIIPAA 552 Methanocaldococcus jannaschii
3915769  542 PAGERDPIIPAH 553 Methanocaldococcus jannaschii
20094923     ------------     Methanopyrus kandleri AV19
6686311  541 PEGERDLIIPAG 552 Methanothermobacter thermautotrophicus
3334250  539 PAGERALITPAK 550 Methanothermobacter thermautotrophicus
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