Conserved Protein Domain Family
psbC

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CHL00035: psbC 
photosystem II 44 kDa protein
Statistics
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PSSM-Id: 214343
Aligned: 172 rows
Threshold Bit Score: 848.239
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
92087138   14 VEMLFNKDKNnIGGRSIESTGFAWWSGNARLINLSGKLLGAHVAHAGLIVFWTGAMTLFETSHFIPEKPLYEQGMILLPH 93 
193735612   1 METPFNSS---IAGRDIESTGFAWWSGNARLINVSGKLLGAHVAHAGLMVFWAGAMVLFEVSHFVPEKPTYEQGFILIQH 77 
193735613   1 METPFNSS---IAGRDIESTGFAWWSGNARLINVSGKLLGAHVAHAGLMVFWAGAMILFEVSHFVPEKPLYEQGFICMPH 77 
71842283   13 VETPFNT--V-IAGRDIESTGFAWWSGNARLINVSGKLLGAHVAHAGLMVFWCGAMTLFEVAHYIPEKPLYEQGCILIPH 89 
126165886  13 VETPFNSNVG-IAGRDIESTGFAWWSGNSRLINVSGKLLGAHVAHAGLMVFWCGAMTLFEVAHYIPEKPLYEQGLILLPH 91 
171259323   1 METPFNSNLG-IAGRDIESTGFAWWSGNSRLINVSGKLLGAHVAHAGLMVFWCGAMTLFEVAHYIPEKPLYEQGLILLPH 79 
299830315  13 VETPFNSS---IAGRDIESTGFAWWSGNARLINVSGKLLGAHVAHAGLMVFWAGAMILFEVSHFVPEKPLYEQGFICMQH 89 
299830521  13 VETPFNSS---IAGRDIESTGFAWWSGNARLINVSGKLLGAHVAHAGLMVFWAGAMILFEVSHFVPEKPLYEQGFICMQH 89 
301500862  11 VILDYNEQFA-QAPQTIQDTGYAWWAGNARLIDLSGLLLGAHVAHAGLIVLWAGGMTLFEVSHYIPEKPLYEQGFILLPH 89 
193735617   1 METPFNSS---IAGRDIESTGFAWWSGNARLINVSGKLLGAHVAHAGLMVFWAGAMILFEVSHFVPEKPLYEQGFICMQH 77 
92087138   94 LATLGWGVAPGGEIVNTYPYFATGVIHLVSSAVLGFGGIYHSIVGPDVLEDSFSF---FGYDWRDKNKMTTILGIHLILL 170
193735612  78 LATLGYGIGPGGEITSTVPYFAVGVIHLISSAVLGFGGIYHSLLGPDTLEESFPF---FGYDWRDKNKMTTILGIHLCLL 154
193735613  78 LATLGYGIGPGGEITNTVPYFAVGVIHLISSAVLGFGGIYHSLLGPDTLEESFPF---FGYDWRDKNKMTTILGIHLCLL 154
71842283   90 LTTLGWGVGPGGEVTDVYPFFVVGVLHLISSAVLGFGGVYHSLIGPDTLEESFPF---FGYDWRDKNKMTTILGIHLILL 166
126165886  92 LATLGWGVGPGGEIIDVYPYFVVGVLHLISSAVLGFGGVYHSLIGPDTLEESFPA---FGYDWRDKNKITTILGIHLVIL 168
171259323  80 LATLGWGVGPGGEIVDIYPYFVVGILHIISSAVLGFGGVYHSLIGPDTLEESFPA---FGYDWRDKNKITTILGIHLVIL 156
299830315  90 LATLGYGIGPGGEITTTVPYFAVGVIHLISSAVLGFGGIYHSLLGPDTLEESFPF---FGYDWRDKNKMTTILGIHLCLL 166
299830521  90 LATLGYGIGPGGEITTTVPYFAVGVIHLISSAVLGFGGIYHSLLGPDTLEESFPF---FGYDWRDKNKMTTILGIHLCLL 166
301500862  90 LATLGFGVGVYGEIKDTMPYFHIGTIHLIASAVLGYGGVYHSLYGPACLEFVPGLarqYGYYWSDKSRMTTILGYHLGML 169
193735617  78 LATLGYGIGPGGEITSTVPYFAVGVIHLISSAVLGFGGIYHSLLGPDTLEESFPF---FGYDWRDKNKMTTILGIHLCLL 154
92087138  171 GIGAFLLVIKALFIGGIYDTWAPGGGDIRFITNPTLNPAIIFSYLLKSPFGGEGWIVGVNNMEDVIGGHIWIGVTCVIGG 250
193735612 155 GVGSFLLVIKAMYLGGVYDTWAPGGGDVRLITTPTLNPIVIFGYVFRSPFGGDGWVVSVNNMEDIIGGHIWVGLLCIIGG 234
193735613 155 GSGAFLLVAKAMYIGGVYDTWAPGGGDVRLITTPTLNPIVIFGYVFRSPFGGDGWVVSVNNMEDVIGGHVWVGVLCITGG 234
71842283  167 GIGCFLLVAKACFVGGVYDTWAPGGGDVRIISAPTLNPLIIFGYVLKSPFGGDGWVISVDNMEDLVGGHIWLGFLCVVGG 246
126165886 169 GFGALLLVIKAIYVGGLYDTWAPGGGDVRIIDNPTLNPAVIFGYVLKSPWGGDGWIVSVNNMEDVVGGHIWIGFTCIAGG 248
171259323 157 GFGALLLVVKAMYVGGLYDTWAPGGGDVRIIDNPTLNPVVIIGYVLKSPWGGDGWIVSVNNMEDIVGGHIWIGFTCIAGG 236
299830315 167 GCGAFLLVIKAMYLGGVYDTWAPGGGDVRFITTPTLNPIVIFGYVFRSPFGGDGWVVSVNNMEDVIGGHIWVGILCITGG 246
299830521 167 GCGAFLLVIKAMYLGGVYDTWAPGGGDVRFITTPTLNPIVIFGYVFRSPFGGDGWVVSVNNMEDVIGGHIWVGILCITGG 246
301500862 170 GLGALTLVWWA-YTHGVYDTWAPGGGYVRPIIHPSINFLRIFKYLIRSPFGGEGWIVGVDNMEDIIGGHIWVGFLCLLGS 248
193735617 155 GLGALLLVAKAMYLGGVYDTWAPGGGDVRYITTPTLNPIVIFGYVFRSPFGGDGWVVSVNNMEDLVGGHIWVGILCIVGG 234
92087138  251 IWHILTRPFSWARRAFVWSGEAYLSYSLGALALMGQTAAEYAWYNNTVYPSEFYGPTAAEASQAQAFTFLVRDQRLGANI 330
193735612 235 IWHIFTKPFAWARRAFVWSGEAYLSYSLAAISLMGFTAALYSWYNNTAYPSELYGPTGPEASQSQAFTFLVRDQRLGANV 314
193735613 235 IWHIFTKPFAWARRAFVWSGEAYLSYSLAAISLMGLTASLYSWYNNTAYPSELYGPTGPEASQAQAFTFLVRDQRLGANV 314
71842283  247 IWHILTKPFAWARRTFVWSGEAYLSYSLAALSLMGLTAAVFVWYNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 326
126165886 249 FWHILTKPFAWARRAYVWSGEAYLSYSLVAVSLMAFIASQYAWYNNTVYPSEFYGPTGPEASQSQAFTFLVRDQRLGASV 328
171259323 237 FWHILTKPFAWARRAYVWSGEAYLSYSLVAVSLMGFIASQYSWYNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGASV 316
299830315 247 IWHIFTKPFAWARRAFVWSGEAYLSYSLAAIALMGWTASLYSWYNNTAYPSELYGPTGPEASQSQAFTFLVRDQRLGANV 326
299830521 247 IWHIFTKPFAWARRAFVWSGEAYLSYSLAAISLMGFTASLYSWYNNTAYPSELYGPTGPEASQSQAFTFLVRDQRLGANV 326
301500862 249 FWHIASYPWIWLHWWFVWSGEAYLSYSLAALSIMGLTASLYAWYNNTAYPSEFYGPTGPEASQAQAFTFLVRDLKLGENI 328
193735617 235 VWHIFTKPFSWARRAFVWSGEAYLSYSLAAISLMGFTASLYAWYNNTAYPSELYGPTGPEASQSQAFTFLVRDQRLGANV 314
92087138  331 ASTQGPTGLGKYLMRSPTGEVILGGETMRFWDLRAPWLEPLRSSNGLDLNKIKNDIQPWQERRAAEYMTHAPLGSLNSVG 410
193735612 315 SSAQGPTGLGKYLMRSPSGEIIFGGETMRFWDLRAPWVEPLRGPNGLDINKIKNDIQPWQERRAAEYMTHAPLGSLNSVG 394
193735613 315 SSAQGPTGLGKYLMRSPSGEIIFGGETMRFWDLRAPWVEPLRGPNGLDINKIKNDIQPWQERRAAEYMTHAPLGSLNSVG 394
71842283  327 ASAQGPTGLGKYLMRSPSGEIIFGGETMRFWDMRAPWVEPLRGPNGLDLNKIRNDIQPWQERRAAEYMTHAPLGALNSVG 406
126165886 329 SSAQGPTGLGKYLMRSPSGEIILGGETQRFWDLRAPWIEPLRGPNGLDLNKIKNDIQPWQERRAAEYMTHAPLGSLNSVG 408
171259323 317 ASAQGPTGLGKYLMRSPSGEIILGGETQRFWDLRAPWIEPLRGPNGLDLNKIKNDIQPWQERRAAEYMTHAPLGSLNSVG 396
299830315 327 SSAQGPTGLGKYLMRSPSGEIIFGGETMRFWDLRAPWVEPLRGPNGLDINKIKNDIQPWQERRAAEYMTHAPLGSLNSVG 406
299830521 327 SSAQGPTGLGKYLMRSPSGEIIFGGETMRFWDLRAPWVEPLRGPNGLDINKIKNDIQPWQERRAAEYMTHAPLGSLNSVG 406
301500862 329 MGAQGPTGLGKYLMRSPTGEIILGGETMRFWDMRAPWIEPLRGPNGLDVYKLCKEVQPWQERRAAEYMTHAPLGSINSVG 408
193735617 315 SSAQGPTGLGKYLMRSPSGEIIFGGETMRFWDLRAPWVEPLRGPNGLDINKIKNDIQPWQERRAAEYMTHAPLGSLNSVG 394
92087138  411 GVATEINSVNYVSPRSWLTTSHFFLGFFIFIGHLWHAGRARAAAAGFEKGINRENEPVLSMRPLD 475
193735612 395 GVATEINSVNYVSPRSWLCCSHFFLAFFFLIGHWWHSGRARAAAAGFEKGINRANEPVLSMRPID 459
193735613 395 GVATEINSVNYVSPRSWLCCSHFFLGFFFLVGHWWHSGRARAAAAGFEKGINRANEPVLSMRPID 459
71842283  407 GVATEINSVNYVSPRSWLTCSHFFLGFFLWVGHLWHAGRARAAAAGFEKGINRENEPVLSMRPLD 471
126165886 409 GVATEINSVNYVSPRSWLTTSHFFLGFAFYIGHLWHAGRARAAAAGFEKGINRENEPVLTLRPID 473
171259323 397 GVATEINSVNFVSPRSWLTCAHFLLGFVFYIGHLWHAGRARAAAAGFEKGINRENEPTLSLRPID 461
299830315 407 GVATEINSVNYVSPRSWLCCSHFFLAFFFLIGHWWHSGRARAAAAGFEKGINRANEPVLSMRPID 471
299830521 407 GVATEINSVNYVSPRSWLCCSHFFLGFFFLIGHWWHSGRARAAAAGFEKGINRANEPVLSMRPID 471
301500862 409 GVATEINSVNYVSPRSWLTCSHFFLGFFLLVGHWWHAGRARSEFVGTERGIDREFEWVLQMKPIR 473
193735617 395 GVATEINSVNYVSPRSWLCCSHFFLGFFFLIGHWWHSGRARAAAAGFEKGINRANEPVLSMRPID 459
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