Conserved Protein Domain Family
type_I_sec_LssB

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TIGR03375: type_I_sec_LssB 
type I secretion system ATPase, LssB family
Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Statistics
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PSSM-Id: 274550
Aligned: 32 rows
Threshold Bit Score: 832.975
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_021515257   4 IFEGLSQITALLGTPVSAETLAAGTVR-T-DvSRIDFRSVGEFLRSEGFDNHLSRRSPEDIPSLAVPALLLLNAQEAIVV 81  Escherichia coli
WP_011441134  14 LSDSLLYLAAHHGRALSRSALLSGLPL-E-R-GVLTVGLYERAAQRAGLEAQLEERPLHDIPALVLPCVLMLHDGSTRIL 90  Rhodopseudomona...
WP_012030881   4 LLEHISLLTRIYGSPVSAVTLASLTPR-DtD-GNFDYKTLSEELTHQGFDNHLLKKPLKRVHNLTLPAVLILRDGGAVLL 81  Dichelobacter n...
WP_011505363  20 LREGMVLLCRRLDRPTSLSELGDGLPL-E-Q-GRLPLREVSRALRRAGVSARVSRRSLKDISPRLLPALLILDNGDTALL 96  Chromohalobacte...
WP_004925335  11 WLQAVLTIARHYRIESSEERIRLQLDW-N-Q-NQNPEEVLELMCRQVGLSLRVAKFNSDLLNPWRLPVIAEFKDGQIGVV 87  Acinetobacter
WP_003114950  22 LRQGLLLLCRQLGRPLGDAELVDGMPL-E-H-GRLPLHLVARALRRADITAQVTRQPLRRIDRYLLPALLLLDDGRALVL 98  Pseudomonas
WP_011357144  24 feKIILDFARQSGKSLSLDLIRSALPQ-G-K-AQAEIEDIQDVARVCGLRIYELPKDVTRLEDEDVPALVQHNVDKFVVI 100 Pelodictyon lut...
WP_011567402  57 LAASLVEAMRISGTDIAVEVLTGGLGLpS-D-GRLSPELAVSAAERHGMRARLERRRLGDIDPAEFPVVLLLRGRDACVL 134 Roseobacter den...
WP_011372820  12 LLKCVKNILDFYFGDVSFKTLSAFF-I-H-S-NTFDTAQAQEILKNFNLSVIEKKISADTIPKHFLPSIIFDAEANPLVF 87  Sulfurimonas de...
WP_010952040  29 WLEVMLQVAHHYRLDVSPQRIRLAAA--E-D-ARPLNEILRHMARQAGLALRFVHFDAKGLRQWRTPLVLELDDGQLAVV 104 Pseudomonas putida
WP_021515257  82 VRIEGAGL-ARqYHVLQPGGLRKTLSHDALMAVYSGYCWFVQPQAKQ-DRRSELPEYDMSGAWFWRVLWRFRAYYGQVIV 159 Escherichia coli
WP_011441134  91 LSIDDAGR-LV-VVDPSRGDAEAAERLDAVAAQYSGFAYFVRPATVA-DPRAVASGDLPKSHWFWSVVSRFGANYAHVAI 167 Rhodopseudomona...
WP_012030881  82 KRIDHVKQiAR-IEFAETG--EQNIALAELEKNYLGFIWHIKPKLEA-DTRSELPEYHLPRGWFWRVIWRFRHYYYQVII 157 Dichelobacter n...
WP_011505363  97 ESLDA-GE-AR-IALPEADGGEETLTPEALDALYSGTAIFARPAARS-DDRAGNFAQAAPKHWLKEPLRACWPAYAEVGV 172 Chromohalobacte...
WP_004925335  88 DKADTEGN-VS-IQLSGDHGLSQSFAIDSLKGLIK-HIYIMRPESSIpDARVDEYIKPYEANWFWSIVLKDWKRYIDIMF 164 Acinetobacter
WP_003114950  99 VGNDGEH--AE-VLVPQSDGGSQRMPLAELEALYSGTAVFAKCRYRP-DGRVGDYASALPEHWFFGPLKRLWRSYAEVTA 174 Pseudomonas
WP_011357144 101 TRLAEGGQ-AD-VLEPEG-------SKEGLKLQEQAYSRNIERVYRI---GFDSASLFSRWSWLLRPLEESKWAYGQVFI 168 Pelodictyon lut...
WP_011567402 135 TARNEDET-YS-VLRPSQASDTLKITQKALLDLYVGHVILLQRQA---ETLGDTKLPTASGHWLWGALRPFWPEYMQVVL 209 Roseobacter den...
WP_011372820  88 LRKTQDK--AT-VFDPQDG-KEKQIDIKKLKAYKRAFLIFKDTQH------VKYLESTENKAWFYEPLKSHYRAYIEIAI 157 Sulfurimonas de...
WP_010952040 105 ESVTEEDD-LA-VVFAGDQGLTSRLPRDTLKGRIS-RVALLRPARPLrDVRTDDYTAPYDRHWFARIVLRDLRPYGQVMI 181 Pseudomonas putida
WP_021515257 160 ASFIINFLALVSSLYVMNVYDRVIPNRSWETLWMLSIGVITAILFECAAKLIRSYLTDVAGKKADLIISSALLRRVMAVK 239 Escherichia coli
WP_011441134 168 AAFIVNILALAAPLFTMSVYDRVIPNGAIPSLVALGIGLALAIAFDFLLKVVRSRIIDMTGKKVDVVLAARIFEHVMALK 247 Rhodopseudomona...
WP_012030881 158 ATFIINVLALVSSLYVMNVYNRVIPNKSYSTLWVLSIGVALAIFFEFVAKLIRAHLTDLAGKKADLIISSALFRRVLQLR 237 Dichelobacter n...
WP_011505363 173 AALAANVLAISTALFAMQVYDRVVPNAAFDTLWVLASGVALAVLLEFLLKGLRAHLLEVIGKRLDLELSSKLFEQAVRLR 252 Chromohalobacte...
WP_004925335 165 ASLIANILALATIIFSMQVYDRVVPSQSIPTLWVLAGGVFIAAIFEFVLRVSRIYLSDIIGKRADLKISDRVFGHALRIK 244 Acinetobacter
WP_003114950 175 AALVANVLAVASALFAMQVYDRVVPNAAFDTLWILASGVALAIVLDGVLRIMRGHLLNVLGKRLDLQLSTLLFSRVLSTR 254 Pseudomonas
WP_011357144 169 AAVMTNLLAMTTSIFSMVVYNRVLPNNATESLVALTIGVFIALVFDSLIKMLRSWFLDGAGSRADVRIGEKLFEQLVSID 248 Pelodictyon lut...
WP_011567402 210 ASVLINFLALAVPLFTMNVYDRVFPNAAIITLWSLVAGVALALGFDALLKLLRSGVIDRVGRKVDASVSASVFRHVSNLR 289 Roseobacter den...
WP_011372820 158 ITLFINVFALAIPLFIMNIYNRVVPNQAYETLFVLASGTILVLIFDVILKYSRTHILDGISKKVGLFWEEELMNKMMLVD 237 Sulfurimonas de...
WP_010952040 182 ASLVANVLALAGVLFSMQVYDRVIPAESLPTLYVLFGGVVLALVFDFSMRLLRLKVTDLLGKRADLRVSDLVYGHALRLR 261 Pseudomonas putida
WP_021515257 240 MSDRPASSGSYASNLREYESVREFMTSATLLAFVDLPFILLFISVIGLVGGWLAVVPLTLVPLVILAGILLQRPLSRHIN 319 Escherichia coli
WP_011441134 248 MDKRPPSVGILANQMRDFDSVREFFTSGTVVSATDMLFAILFIAVLFMIAGPLGWIPLAMLPVMIIIGLLIQRPLDRAMR 327 Rhodopseudomona...
WP_012030881 238 LADKPVSSGSYANNLRDFESVRDFMTSASLLAFVDLPFFFLFIVVMFIIAGPLAFVPLSLMPIVLVIGLFAQIPLSKSIN 317 Dichelobacter n...
WP_011505363 253 LNAKPASTGAFTSQVREFESVREFFTSATAGAISDLPFVALFVLIIAWIGGPVAWVPVAAIAGMILPGLLLQRHLARLAR 332 Chromohalobacte...
WP_004925335 245 NKERSKSTGTFISQIRELEGVRELVTSTTITAIADLPFFLLFLVILWIIGGHVFWVVVIMVPLMILPGILAQKKLAKLAQ 324 Acinetobacter
WP_003114950 255 VAAKPASMGAFSTQVREFESVREFFTSSSAALISDLPFVAIFLLIIAVIGGHVVWVPLVACVLMILPGLLTQRLLGHLSR 334 Pseudomonas
WP_011357144 249 LSAKRDSVGGLSSVMREFETLRDFLTSATLVALIDLPFVIVFLIAIFVIGGPVVLVPAVLVIVVVASGLIAQPFLSKLAQ 328 Pelodictyon lut...
WP_011567402 290 LDEDVPPSGSLMNTLKDYEQVADFFSSQTLSHLIDLAFAVLFIALIYYIGGPLAYPPALALGFVLLMGLIILRPLRGASE 369 Roseobacter den...
WP_011372820 238 VEFDKQLSGSKANLFKEIQQIRDFFTNRSLTQIIDFPFFLIAILVIYIISPTVAVIPFIAALLIMIFNFLMQHPISKLSK 317 Sulfurimonas de...
WP_010952040 262 NSVRPKSTGSFISQLRELESIRDLITSSTATVLADLPFFLLFLFVFWLIGGVLVFIPLVALLAMVLPGLLAQRRLARLAN 341 Pseudomonas putida
WP_021515257 320 ASMRESSQRQGLLVEALDGIETLKLNNAVNWVQRRWDGYTASVARSSIRVKNTSNVIISFSTAIQQINTVLLVILGTYLI 399 Escherichia coli
WP_011441134 328 RMQAESAARHGILVESLNGIETVRAVAGEGRVQTVWERSVAATARSSEDVQFWASLAMTAASVASQLCSLLLVVVGVFLI 407 Rhodopseudomona...
WP_012030881 318 ESMRESSQRQGLAVEAIEGVETLKANNAFSWAQKRWDGYTAKTAASSIKTKNISMFVTSLSAAVQQLNTVVLVVLGTYLI 397 Dichelobacter n...
WP_011505363 333 ENLREGAVKNGVLLESLDQLETVKATRAEGRNLALWESLSAQLSNASIRLRAVTSMLTHSASLLQQLGYVGIVIVGVYRI 412 Chromohalobacte...
WP_004925335 325 EGMRESAIRNAILVEAVQGIEDIKLLRAESRFQNQWNHMNELSADYSMQQRKIVGVLSAWTQKLQGLTYALVVLVGCFAV 404 Acinetobacter
WP_003114950 335 QNLREGAMKNGVLLEAFEHLETVKATRAEGRCLHQWETLTGELAGTAMKTHTLASTLSYSASIVQQLCYVGVVVFGVYRI 414 Pseudomonas
WP_011357144 329 ESLEEGKSKQSILVETISGLEVMKTSMATREMRKRWRESLLAQSGSAVKSRLVSQIVVNFSAFAQQIAQVMIIVVGAYEA 408 Pelodictyon lut...
WP_011567402 370 HNRATGGAKTLVASEAVSELETLKAVAGHNRMQSRWERQSADAAMTQAKSRRLATLATTLTALATQASSIGIVVIGVYLA 449 Roseobacter den...
WP_011372820 318 NNSENIQSKYSFIFESIQGAQSIKLSNAAPTRMFLWRNIVAFVDGVGIKIQSLHALSTNISQFILQLVTVLVVIVGVFEI 397 Sulfurimonas de...
WP_010952040 342 ASMRESALRNAMLVESIQGLDEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWTQNVQGAVFAVVIVIGAPMV 421 Pseudomonas putida
WP_021515257 400 hsddPHNRITMGALIAAVILSGRALAPLGQIASLATRFQQARLAMQGVNEIVRRPVERESQTHYLTVKDIQGEFHFSAVT 479 Escherichia coli
WP_011441134 408 ----LDGKLSVGALVAANMLAGRVLGPIAGIAGVMTRATQTSSALRSIDRLMSLERERPPEKIYVAREIKQGAIQFKNVS 483 Rhodopseudomona...
WP_012030881 398 hadnIANRITMGALIACVILSGRALAPIGQISGLAVRFQQARHALNGVNGIAERPIERSPDRQYITFDNVKGRLVFERCR 477 Dichelobacter n...
WP_011505363 413 ----SAGDMTIGALIACSILGSRAIAPMGQTSALLARWQHVKAAVEGLDELMQAPNE-SGAGQKVRKPRLHGDYRLEEVV 487 Chromohalobacte...
WP_004925335 405 ----MDGEMTTGALVACSILSSRMLGPISQITGVLGRLQQAKVAKQSLDELMKKPVDQPDRAHLVHKPVIHGDYDLSNVV 480 Acinetobacter
WP_003114950 415 ----SEGAMTVGGLVACSILASRAIAPLSQAAGILGRWQHTKVAMEGLDQLMSAEQERPQGKRFVHKERLQGHYRLEGVR 490 Pseudomonas
WP_011357144 409 ----AVGNMTMGALIAAVILAGRGMAPLGQIAGLLTRLVHAKASFLALDRFMALPLDRPPSTRFLNKEKMLGKLEFRQVN 484 Pelodictyon lut...
WP_011567402 450 ----LEGQITMGAVIAAMILSGRALAPTAAVTGLFVRGSFAISTLQSLGKLMNQRSDADGRGRTINTTDRSGEIELKDVS 525 Roseobacter den...
WP_011372820 398 ----SNQNLSVGGLIAVTMLASRAMVPIVSLSSILIRLKEMGESIDRVDEFISLPAE-DNSTTEAGIGKIEGKIEFKNVT 472 Sulfurimonas de...
WP_010952040 422 ----IAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQGLDKLMQSPVDHPEGEARVHLPAIHGEYRLRQAN 497 Pseudomonas putida
WP_021515257 480 FFY-KPELPAALKGMSVCIRPGEKVGIIGTIGCGKSTLLKMMVGLYRQNKGQITLDGVAMQQLDPCFVRDKVFLLEQNPR 558 Escherichia coli
WP_011441134 484 FSY-PNSQAKALDNVSFQIRPGEKIGIIGRVGSGKTTVGRLATAFYPPSEGTILIDGIDIRQYDPADLRAGIGFVLQDTD 562 Rhodopseudomona...
WP_012030881 478 FGY-QKEGKKVVENLSLTINAGEKVAILGRIGSGKSTLLKLACGLYEPQEGTVTLDDVDIRQIDPYFLRHKVALLGQSPR 556 Dichelobacter n...
WP_011505363 488 VRH-YEEGPAALKIDELTIEAGSRIALLGGNGAGKSTLLRLLSGFVEPTAGRVMLDDINITQIESADRRRAIGYLPQDIA 566 Chromohalobacte...
WP_004925335 481 FQYnPEDSKPNLAIQKLRIKAGEKIAILGRNGAGKSTLLQLLSGMQSPINGKLTLDDLELSLIDPADIRRDMGLLNQNAS 560 Acinetobacter
WP_003114950 491 LAH--GDSPPVVDVQALNIRAGERVALLGGNGAGKSTLLRLLSGLLDAQAGRLLLDDVSLTQIDPADRQRGIGYLPQDVA 568 Pseudomonas
WP_011357144 485 FAY-PDQQQNALQDVSFTIQPGERVALLGKIGSGKSTAARLMLGLYGPSSGSVLIDDTDVRQIDPFDIRRHVSFIMQDSW 563 Pelodictyon lut...
WP_011567402 526 LNY-QGAVVPALKNVSLKVSAGSHIGIIGPIGAGKTSLTRVMAGLWPPTDGLILLDGLNTRQIAPETLRRFVQLVPQEAV 604 Roseobacter den...
WP_011372820 473 YKF-NNSKHPSIDSVTFTIQPGEKVGIIGQTGAGKTTLLKLLMGLYKPTSGSIYLDNHDITTIHPVEIRQNIGIMPQEPF 551 Sulfurimonas de...
WP_010952040 498 FRY-SEDYPPVLNIGRLDIQPGERIAVLGRNGAGKSTLLQALGGAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYAR 576 Pseudomonas putida
WP_021515257 559 LFLGTLRENLQLSRLpgSLSDVDMINAAGRFGFDRFIRHHPCGLDMQIGEGGQGLSGGQRQMVALTRMVLGSPRVVLLDE 638 Escherichia coli
WP_011441134 563 LFYGKLRDNITLGRS--GATDAEVLEAARLAGVETFIAGHPQGYDMMIAEGGRSLSGGQKQAIGLARVLIRKPRVLFLDE 640 Rhodopseudomona...
WP_012030881 557 LFLGTLRENLDMARAdsFFSDEILINALRRFGLDRVIQGHPKGLDMPLGEDGAGLSGGQRQIVALARLTLKDPAVVLLDE 636 Dichelobacter n...
WP_011505363 567 LFYGTLRDNLTLDGA--AYEDEEIFQALDSVGLGRFVRSHPQGLELPIASSG-SVSGGQRQAIGLARLVLQDPRIVLLDE 643 Chromohalobacte...
WP_004925335 561 LFYGTIRENLTLGAP--LANDHEIIKALKVTGALSFVEEKKEGLDHIILEGGVGFSGGQRQALLLARLLIRQPNILLLDE 638 Acinetobacter
WP_003114950 569 LFHGSLRDNLNLENA--ALGDEELLETLDGVGLGAFVRGHPLGLDMPI-QGNASLSGGQRQAVGLARVLLQDPPILLLDE 645 Pseudomonas
WP_011357144 564 LFSGSVRDNIASGAL--AVSDEELLRAAEIAGVHDFLGDHPNGYDLMLRERGEGLSGGQKQAISLARGLVGNRSVFIMDE 641 Pelodictyon lut...
WP_011567402 605 LFTGTLAENIAFGVP--GARDEDILRAARDAGVDRIAASHPDGFGMQITERGRNLSGGQRQMIALARALLPQPRVLILDE 682 Roseobacter den...
WP_011372820 552 LFNATIKENIELFRP---ISKTRMMEIITFIGLGDLIKKSGKGDALQVGERGCNLSVGQRHLVGLARALAPNPPMLILDE 628 Sulfurimonas de...
WP_010952040 577 LFHGTLRENLTLGAG--QASDQELVAALAATGALDFVRRLPKGMDHLILEGGLGLSGGQRQALVLSRLLVRQPQVLLLDE 654 Pseudomonas putida
WP_021515257 639 PTTGLDLQTENIVLKGLNHWSR--G-RTMVVVTHRLQVLNIVDRIIVMNEGRVMMDGPRDEILKKLSGK 704 Escherichia coli
WP_011441134 641 PTAHFDVRSEGEFLERLKKLAH--GeMTIIVSTHRPSLLSLVDRILVFDQGKIVADGPTEQILTKLRpq 707 Rhodopseudomonas palustris
WP_012030881 637 PTTGLDQSTEQMVLTALKDWIG--D-KTMIVVTHRPQILQLVDRIVIMEQGQVLMDGSKQAVLAKLSAS 702 Dichelobacter nodosus
WP_011505363 644 PTAAFDQNNEKRAVAFLKRWME--G-RTLIVSTHKKPLLELTGRAIVLRDGKLAMQGDLDQVVQGNRGA 709 Chromohalobacter salexigens
WP_004925335 639 PTAAIDDVSEKQLIDHLKQWLA--H-RTLVVATHRRAVLELVDRIIVINDGKIVMDGPRDQILKQSTQP 704 Acinetobacter
WP_003114950 646 PTAAFDQGSEKQVIDYLQQWLG--K-RTLVITTHKKSMLALVERAVVLRQGRVIMDGPLEQVVQGNQvq 711 Pseudomonas
WP_011357144 642 PTSMMDMGSETKFVERLSQVII--G-KTLVVITHRSAMLKLVDRVIIFDKGRIIADGPKSILDRKNPAP 707 Pelodictyon luteolum
WP_011567402 683 PTSAMDMQSEMLFIDGVERALArkP-MTLVVSTHRMALMRLVTHVAVMTSGTLRSYGPRDEVLSSLKDA 750 Roseobacter denitrificans
WP_011372820 629 PTTGLDMGSERRLIDKLKGGLSp-D-KTLLVITHRLAALDLVDRIIVINDGKIVADGPKNKVLQALQTP 695 Sulfurimonas denitrificans
WP_010952040 655 PTASLDDMTERKLLDNLERFCQ--G-RTLVIATHRLSVLQRVDRILVLDAGRIVIDDARDAALAKLQGA 720 Pseudomonas putida
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