Conserved Protein Domain Family
XerD

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COG4974: XerD 
Site-specific recombinase XerD [Replication, recombination and repair]
Statistics
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PSSM-Id: 443999
Aligned: 774 rows
Threshold Bit Score: 78.1123
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_041544153  25 LsSdeiaaadsigliegmpfiLgSdg-tyDhhLNRFLRScp-tmGv--RSMNSLRAYARDIIVWMR---FLEErqNGk-S 96 
NP_046403      1 --------------------------mehfidtyLYELRk----V---RDEKTIKKKEylLKHLQD---Ys-------eD 37 
ACR42379       1 ------------mklelgsppesG-----Dl-YNAFINAlv-laG---AGNGTIKLYSTAVKDFLD---FINk------D 49 
WP_011733859   5 sgN------------------I-T-----Dd-LQRWVVAymqeiTnknLSGRTRDIYAGILDDFVEhsrQF----QGelG 55 
WP_013143600  17 L-D------------------N-K-----Di-LEEFIFAle-aaG---ASEDTVRAYRSAIKDFLE---FLGEk-----P 58 
WP_126449817   1 ------------mklqlgscprgV-----Ep-LSAFIEAlr-aaG---ASENTVKLYSTAVREFLE---FVGk------E 49 
WP_048058883  17 L-S------------------N-K-----Ei-VEEFKASle-asG---ASEETVKAYLSAIKDFLG---FIGDk-----P 58 
WP_013128946  17 L-S------------------N-Q-----Ei-LQEFIMLle-stG---ASKDTVKAYQSAISDFLD---FIGDk-----P 58 
WP_013866556   3 E-V------------------S-K-----El-VRKYLDFh----Ss--KSKETLKRYRSSLHIFMEf--Fpd------kS 42 
WP_012209549   5 dnTsd---------------sI-KdkdkiEgyISEFLSYlkfvkR---RADSTIYEYKKILKSYKK---FV--------Q 54 
WP_041544153  97 VwsADRDDIAAFhEaRrLSeppfriS-----------ASSWNRMIAALDKLYRWAvdeKi-------I-Aa--AP----F 151
NP_046403     38 LpaFDQSEIFSFyE-Y-LKnk--nlK-----------ETTIRDILKEVRLFYEWLqeqGlnlkfdekA-Lk--KL----F 95 
ACR42379      50 PrkVTSEDLNKWiS-N-LLnre-gkVkgddvekrrakSVTIRYYIIAVRRFLKWL------------------NV----S 104
WP_011733859  56 IedINRIFLNGYlA-Ergnt-grrfS-----------ATTKKLHITVLKTFFLYIte---------------nNDnnhdF 107
WP_013143600  59 LrnVSLRDIILWrN-H-RLkn--gfSkaktr-dkkkwQTTLHYYSMFLNRFFNWL------------------GL----N 111
WP_126449817  50 VekVTQADVNAWmA-E-MVkrg-------------grSSTIRYYVIAVRRFLGWA------------------SV----D 92 
WP_048058883  59 LrdVTLRDILAWrN-D-RLrn--gfPnrkis-dkekwLVTLHYYTLFLKRFFEWL------------------GV----N 111
WP_013128946  59 LkeVTLRDVLAWrN-E-RLks--gfPrkktl-dksrwQATLHYYTLFLKRFFEWL------------------GL----Q 111
WP_013866556  43 WddITVDDAIFFyN-SyLsk---vsK-----------DTVVKR-LKDVSRFLDWCveyKy-------IlQnniKL----Y 95 
WP_012209549  55 IygLTRgcFLKYlE-E-Isn----lS-----------QRTIKLRIVVLKSFLNYLyenGe-------I-Sg--KK----Y 103
WP_041544153 152 TyrQLwSrastsgaviavavncskESgarN-----GdmRflDLPRYLVFRDVG--LRGRlpDgred--ptrRgrNGE--R 220
NP_046403     96 Q--SK-K-----------------SQ---Ea------lK--SKKKYYSDDEINliLNAI--Rga------vE---GIstK 133
ACR42379     105 V--KP-P-----------------IP---K-----Vr-R--KEVKALDESQIQkvLNTC---------------KRT--K 136
WP_011733859 108 E--KMf-----------------------KkmnikSe-S--NEKPALNEDDVQrlLNYL--EkikrarrnqNt--nI--R 153
WP_013143600 112 I--RI-P-----------------RI---R-----Kp-P--RKIHVLNDDEIRklLKSI---------------RDP--L 143
WP_126449817  93 V--RP-P-----------------VP---R-----Sr-P--RKVRALTPEEIEr-LRAI---------------AKG--E 123
WP_048058883 112 I--VV-T-----------------PV---R-----Kp-H--ASINVLSDEEVEklYNVA---------------RTP--L 143
WP_013128946 112 L--RV-P-----------------SV---K-----Kp-S--SRITVLTDEEVGklFQAA---------------RNP--L 143
WP_013866556  96 V--KS-------------------LK---L-----Qn-N--GRDISLNEEEVNilLSNI--Kdy---------------- 125
WP_012209549 104 W--Kd-A-----------------NA---K-----Ip-S--DVPKGLTESQIKvfFSVI--Ed----------------K 134
WP_041544153 221 ---NALFAELLITTGLRLQEASSLLLNELptlDTcldstaRSLp----F-------------RLaaaT-AKGSRGRd--- 276
NP_046403    134 hpiYYILTIFLLCSGLRISEAVKV--RKK---DF------EVKr----IlteegeekevwfvKV---ReGKFGKERkali 195
ACR42379     137 ---DKLIIRLLLDTGLRANELLSVLVKDV---DL------ENNm----I-------------RV---RnTKNGEERv--- 181
WP_011733859 154 ---NTLLCKIMLFGGLRAVELTHLRLKDM---VY------DKEddiysL-------------LIe----gKgGKQRt--- 201
WP_013143600 144 ---DKLILFILLDTGLRSKELLGIRVSDI---DF------ENRt----I-------------TV---TsTKYDKERk--- 188
WP_126449817 124 ---DAVVLNLLLDTGLRAKELLSLTREDI---DL------RGMt----I-------------RV---ReTKNGEERv--- 168
WP_048058883 144 ---DKLVLRLLVDTGLRSRELLGLRVEDV---NF------HSRv----I-------------KV---TsAKYGKERy--- 188
WP_013128946 144 ---DKLILRLLLDTGLRSKEVLNIKVGDI---DF------DGRt----I-------------RV---VeGKYGKERy--- 188
WP_013866556 126 --lYYVYTLFILTTGVRISEFKNITMNDI---HL------EDRl----V-------------YI---RgGKGNKDRm--- 171
WP_012209549 135 f--DKTFYSLLLKTGLRISEALWLEKEQI---IFy----nDHAe----L-------------VI---N-GKGNRVRy--- 181
WP_041544153 277 IRMPIRLIG----QLH-DYVRIERdnalg-----rarrSGrirrtrspipvvecehralrlndgdravrmSvdQMtpaer 346
NP_046403    196 YFFRPEWKR----IFE-ERLKKLKpedffftyavkypkSV------------------------------KvfTL----- 235
ACR42379     182 VFFTDETKQ----LLR-KYMKGKKl--------------D------------------------------Ek-LF----- 206
WP_011733859 202 VYIPRTLIEdeveTLKeEYg------------------EE------------------------------Wl-IC----- 227
WP_013143600 189 VLVTSRTIE----LIR-SWIELKNl------------gKE------------------------------Dr-LI----- 215
WP_126449817 169 VFFTEKTKS----LLE-DHL--KRc--------------K------------------------------Gr-LF----- 191
WP_048058883 189 VVATEETFK----MLD-AWIRLNGl------------mPG------------------------------Dr-LF----- 215
WP_013128946 189 VTASNETFK----LIE-AWVKLNNl------------gRD------------------------------Dr-LV----- 215
WP_013866556 172 VFICDELYP----FLS-NYI-KHReml---------npKT------------------------------Dk-LV----- 200
WP_012209549 182 LKISKQYAE----QLI-TFAEKNTpkg---------aqGK------------------------------Ky-IF----- 211
WP_041544153 347 trlveattgaplapwL-T----EDGLPMPMASWEAVFTRAsercrrFGFD----------D---M---HVTPHMLRHSFA 405
NP_046403    236 ---------------T-D----KTAKWFYW-KLEKELREK------GYEI----------E--------VNAHRFRNTYI 270
ACR42379     207 --------------------------DITYDALYRKLKRL------GNKV----------E---I---ELRPHILRHTFA 238
WP_011733859 228 ---------------S-T----RNGTIVDRTNLYQIITGI------YKRA----------G---Vd--HTGLHILRHTFA 266
WP_013143600 216 --------------------------PLTYSGLYKRIKRL------GKRA----------G---IpvwKIRPHILRHTFA 250
WP_126449817 192 --------------------------DLSYQGLYKRLREL------GRRA----------G---V---ELRPHLLRHTFA 223
WP_048058883 216 --------------------------NLTYSGLYKKLKRL------ATRA----------G---IapeRVRPHVLRHTFA 250
WP_013128946 216 --------------------------DLTYGGLYKKLKRL------AAKA----------G---IppeKIRPHVLRHTFA 250
WP_013866556 201 ---------------NkNgyklSe---GHICEYRDYLREV------SKGL----------S---V---KVTPHVLRHTFG 240
WP_012209549 212 ---------------S-N----DNDVPITSRTMERRFKDY------VIKAnnkidqlrtkGynnInyiNATPHALRHTCA 265
WP_041544153 406 VHMltlLlReQvGwvisersrhlgsAyrrmigdPLLKLQRLMGHSRIESTY-IYLDhLADsqEIVdAAvGnLgldvtSgE 484
NP_046403    271 TKL---A-T-K-G------------F-------PVNLIADWVGHSKISTTMdVYME------AER-EK-Q-L-----E-A 310
ACR42379     239 TLS---L-K-R-G------------I-------NVITLQKLLGHKDIKTTQ-IYTH-LVL--DDL-RN-E-Y-----L-K 280
WP_011733859 267 RRL---V-N-N-N------------T-------NLETIRDLLGHSNIAITAkFYAK-TNE--NNK-KA-A-I-----S-R 309
WP_013143600 251 TQA---L-K-K-G------------L-------SLPYLQRLLGHSDIKTTQ-VYLH-VTV--DDI-RS-E-Y-----D-K 292
WP_126449817 224 TNA---V-R-K-A------------M-------PLPALQAIMGHRDIKTTQ-VYLH-LVN--RDL-EE-A-Y-----R-K 265
WP_048058883 251 TRA---L-R-R-G------------L-------SLPALQRLLGHSDIKTTQ-IYLH-LSV--EDL-KK-E-Y-----Y-E 292
WP_013128946 251 TRA---L-R-L-G------------I-------SLPSLQRLLGHTDIRTTQ-VYLH-LTI--DDI-KK-E-Y-----R-E 292
WP_013866556 241 TLA---C-K-H-G------------M-------NLQVLSKLMGHSSMAITS-KYLH-PDR--DTM-KN-D-L-----N-K 282
WP_012209549 266 KRL---L-N-S-G------------K-------NLEEVRYILGHTTISTTG-IYVR-SDSh-----SS-V-L-----D-Q 305
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