Conserved Protein Domain Family
rpoZ

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PRK00392: rpoZ 
DNA-directed RNA polymerase subunit omega; Reviewed
Links
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Statistics
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PSSM-Id: 234744
Aligned: 811 rows
Threshold Bit Score: 33.3512
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
254796437  1 MQSGSLPDVQHEEGDKSPVIALKELYSLDMdyeklfhaairRIVHFSGsgyagisSDSGPARPHARGLVEH-------ID 73 
15605753   2 SRRPKIEEAMKRVESRYELVHAAVRRTLQL-----------LREGEDFfvqe----ggevHKKTFAAIEDIae-----gk 61 
289548239  2 SRRPNIEEALKHVSSRYELVHAAAKRVEQL-----------MAEGEdffv--rdkVKKEMVKKTFQAIEDIal---gkVK 65 
195953141  2 SSRPKIYEALKKVNNKYELVHAAVKYTEKL-----------MQEDDSSfir--gkREL--IKKTFFAINRLad---sdME 63 
182414533  1 MRDDYIKDALKVIPDPNLLINVVSRRVKQL-----------RRGNRpl------vESLEKLSSEDVALREIie---gkIS 60 
182413044  1 MRDDYLQSALTVIPDATILINVVSRRVKQL-----------RR-GNRPlv---vsLEK--LSAEDTALREIae---gkIS 60 
225850957  2 NKRPLIEQALKRVNNRYELVHAAAKLAKDL-----------YETGAESyv----tEEGIPLKKTVISINEIakg--raVI 64 
188996804  2 NRRPLIEEALKKVKSRYELVHAASKLAIEL-----------YETGLETyi----tEEGIPLKKTVIAIDKIakgeasiVK 66 
225848108  2 NQRPLIEQALKKVKSRYELVHAASKLAIEL-----------YETGAETyv----tEEGIPLKKTVIAIDKIas------- 59 
294053706  1 MRDDYLQQAQEVITDPMILINVVSRRAKQL-----------KSGYKpl------iESLERLSAEDMALREIie---gkIT 60 
254796437 74 HDLVeerdPEVFSD 87 
15605753  62 VKII----KKKEES 71 
289548239 66 VVKL----REEEV- 74 
195953141 64 IKIT----EENEEI 73 
182414533 61 FEVG----EN---- 66 
182413044 61 YELG----ANEESP 70 
225850957 65 LRKE---------- 68 
188996804 67 KQDK---------- 70 
225848108 60 ------geAKIIRK 67 
294053706 61 YQLA----EPEEA- 69 
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