Conserved Protein Domain Family
PDRG1

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cd22860: PDRG1 
p53 and DNA damage-regulated protein 1
p53 and DNA damage-regulated protein 1 (PDRG1) is a beta-type subunit of the prefoldin-like complex that is part of the PAQosome (Particle for Arrangement of Quaternary structure) complex. The PAQosome is a cochaperone that assists the chaperone HSP90 in assembly of large protein complexes. PDRG1 acts as a tumor marker in multiple cancer types, including testicular cancer, lung cancer, colorectal cancer, liver cancer, etc. Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits being evolutionarily related.
Statistics
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PSSM-Id: 467471
Aligned: 118 rows
Threshold Bit Score: 73.7016
Created: 6-Mar-2020
Updated: 27-Apr-2023
Structure
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Aligned Rows:
 
Feature 1:putative prefoldin oligomer interface [polypeptide binding site]
Evidence:
  • Comment:based on prefoldin complex structures
  • Comment:forms a hexamer composed of two alpha and four beta subunits

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                          #  #            #######  ######   ##   #      
Q9NUG6         9 VLRYLVEVEELAEEVLADKRQIVDLDTKRNQNREGLRALQKDl----sLSEDVMVCFG-NMFIKMPHPETKEMIEKDQDH 83  human
EJW86677      22 VLDNMTEWENLGQSIITGKRTMVELDERRQKCREALRQLHKAkns-anKKSKNWVCFGsTTFLKVTTDQAKQMIEDDMKV 100 Wuchereria banc...
VDN02310      21 LINKMTEWESLGQGIIMGQKIIVELDKRRQKCREALRKLRQEskdrtkRRSKSWLCFGdTTFVKVASDKATQMIEDDIKI 100 thelaziosis nem...
PAV77945      16 IIDKLTRLQELAARIRDERCSLVELDRRRQKLREGLRALEKRk-----EQEKTMICMGpHCFIAFPQTEAGKIIREDMQN 90  Diploscapter pa...
VDD92747      18 LVEKLSRYEQLGQEVIVGKRALVELDERRQKCREATRQIQKQr----dLGDSCWLCLGeSSFIKVPTEKALSFLKEDVKT 93  human pinworm
OTF69956      13 VLNTLQKSEFIGENILRDRNEIIHLDRIRQKNREALTAIKNHyk---nDDENVYICMG-NMFIKHPIHRARSLIQDDQKM 88  Euroglyphus maynei
VDK25910      18 VVDRLRDYEELGQSVIMGKQAIVELDERRQKCREAARHLRNKak---tQGEQSWVCLGkTTFIKLPTNQSLSLIEEDIQV 94  herring worm
EFX88251       6 TQQLILQTEAAAQEIFITRDEIVALDFKRQKTREAFRALKNGl----ePSEKAWVSIG-NIFVKIRTSKAQNLLERELKE 80  Daphnia pulex
XP_024501880  30 IIEKLSTLQYLGNEVIGARYEIVELDKIRQKTREGLRKLKDGk----gQKKTSIVVND-KVMLKLPTKFVIKQLEKEYNN 104 Strongyloides r...
NP_001122634  24 LRDKTSEIIYLSTKLNHAKETCVNLDNERQKFREVSRKIKEK------DIDPVWIYNG-TCFLQTSQANSLNILEKDTKT 96  Caenorhabditis ...
Feature 1                                    
Q9NUG6        84 LDKEIEKLRKQLKVKVNRLFEAQGKPEL 111 human
EJW86677     101 IGTTLEEARESIKNQVNKLKKMEDCKNL 128 Wuchereria bancrofti
VDN02310     101 IETTLEGTREEIRRRVDELKKMENSKSL 128 thelaziosis nematode
PAV77945      91 IDKLTEEVNVSLKKDVDALLRMEGDKNL 118 Diploscapter pachys
VDD92747      94 IEETVNFTREELKKKVDEVRRIEGSKNL 121 human pinworm
OTF69956      89 VNEQIETIHQTVKNNVQRIQEMEGKAEN 116 Euroglyphus maynei
VDK25910      95 INSTIDSARDELKKRVDELKEMEGSKDL 122 herring worm
EFX88251      81 VDQEISEHRNKLKEQVKHLRDLEGKPEL 108 Daphnia pulex
XP_024501880 105 SSNEIDKARELLKDKVDELKKYEGDKDL 132 Strongyloides ratti
NP_001122634  97 VEEVRGQIQEVIKKDMDTFLKLHKKRNL 124 Caenorhabditis elegans

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