5M1B,5O3M,4IP2


Conserved Protein Domain Family
UbiD

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COG0043: UbiD 
3-polyprenyl-4-hydroxybenzoate decarboxylase [Coenzyme transport and metabolism]
3-polyprenyl-4-hydroxybenzoate decarboxylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Statistics
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PSSM-Id: 439813
Aligned: 353 rows
Threshold Bit Score: 347.114
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5M1B_A         6 YNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTlr--aGGPALLFENPKGY--SMPVLCNLFGTPKRVAMGMGQED 81 
NP_388246      3 YQDFREFLAALEKEGQLLTVNEEVKPEPDLGASARAAsnlgdKSPALLFNNIYGYh-NARIAMNVIGSWPNHAMMLGMPK 81 
YP_429258      3 YADLRQFLERLEAEGQLVRVKEPVQAEPDLSSIGRAAan-leQAPAVLVENIKGY--YQKVALNVHGSWANHALMFELPK 79 
WP_009943033   3 YDDLRSFLAALDEQGQLLHVAEQVMPEPDLGASANAAsrlgsGAPALYFDDIAGFt-SARVALNVHGSWANHAVAMGMPA 81 
WP_013252321   6 YQDLRGFLKTLEKEGQLVRITDEVLPEPDIGSAGRAAsr-mtNGPAVMFDNIKGYgpGHPVVTNVHGSWANHALMMGMPK 84 
WP_013255927   3 HQSLRDYLEDLKRNQQLIEVREKTIPEPGIRTYLRAAanmgdAGPAILLNNIAGYk-GYQVAGNVHGSWANHALLLGMEK 81 
WP_007953305   5 YKDLRDFLATLEEEGQLVRIKEEVMPEPDIGAAGRAAan-ieNSPAILFEKVNGY--NYSLVTNVHGSWRNHALMLGLPK 81 
WP_016389838  19 IGSLRDFLEFLEENGQCITWTDEVMPEPDIRNIAVAAgrdsmNGPAVIFNNIAGYp-GKKLVLGVHGSFTNLALLLGHPK 97 
WP_068805419  15 VRSMRDFLDLLSSHDQCITWPDPVMPEPDIREICVASgqdvpGAPAILFDKIRGYp-DKRLVTGVHGSWANLAILLGHPK 93 
WP_111741903   3 FDDLRSYLRALEEHGQLLRIEEQVQAEPDLAAAANATgrigeGAPALWFDNIEGFt-DARVALNTLGSWKNHAIAMGLPP 81 
5M1B_A        82 vsalR-EVGKLLaf-----lKEPeppkgfrdlfdklpqfkqvlnMPT-KRL--RGAPCQQKIVSGdDVDL-NRIPIMTCW 151
NP_388246     82 ----DtPVKEQFfefakrydQFP---------------------MPV-KRe--ETAPFHENEITe-DINLfDILPLFRIN 132
YP_429258     80 ----DmPVKEQFmeisrrwdNFP---------------------VPV-RRV--SSSPVKEIKHHe-QINLfELMPLFRVN 130
WP_009943033  82 ----TtSTREQVeefvrrweDFP---------------------VPP-ERr--TDPPFAENALQGdEVDLfSVLPLFRLN 133
WP_013252321  85 ----TaTTKEQFlelnrrwdLYP---------------------VKP-NVVkrEDAPCKENSLDGdEVNLfDLLPLYRIN 138
WP_013255927  82 ----SaSIRDQFfrvdelwnTAK---------------------KGTiKTV--SNAACQEVVVDk-DINLyKIMPLFRIN 133
WP_007953305  82 ----DtTIKEQFfelnrrwdKFP---------------------VPP-KILarEEALCKENVITe-NINLfDILPLYRIN 134
WP_016389838  98 ----GtTIKELFydiisrwgDDK---------------------PLL-DFIepEAAPVNENRLTd-NFNLyDLLPLYRIN 150
WP_068805419  94 ----NtTIKAMFydiisrwgSEK---------------------AQL-PRVkpDQAPVHEVRIEr-DINLyDILPLYRIN 146
WP_111741903  82 ----NtGTKEQIaefirrweNFP---------------------VAP-VRr--ESPPWAENTVDGeDINLfDILPLFRLN 133
5M1B_A       152 PEDAAPLITWGLTVTRGPHK----ERQNLGIYRQQLIGKNKLIMRWLsHRGGALDYQEWCAAhpGERFPVSVALGADPAT 227
NP_388246    133 QGDGGYYLDKACVISRDLEDpdnfGKQNVGIYRMQVKGKDRLGIQPVpQHDIAIHLRQAEER--GINLPVTIALGCEPVI 210
YP_429258    131 KFDGGFYLSKAAVVSRDPEDqdnfHKQNVGIYRIQVKGKDLLGIQVLpFHDIAIHLRKAEER--NQPLPVAIAVGNDPVL 208
WP_009943033 134 EGDGGFYVDKAAVVSRDPRDpdhfGKQNVGVYRMQVKGRNRLGLQPVpMHDIALHLDEAERA--GEDLPVAIALGNDPMI 211
WP_013252321 139 EQDGGMFIGKPATVTADPDDpgnfDKMNVGTYRIQVKGPNRIGMQCLaMHDIAKQLRAAEAK--NERFPFAIALGNAPLI 216
WP_013255927 134 QYDGGFYLSKACIISRDPDDpdniEKENVGMYRVMIQGADTVGMQALaFHDLARHLKTAEER--NEPLPVAICVGNPPLL 211
WP_007953305 135 EQDGGFFLSKASVISGDPEFpedlNKLNVGIYRIQVKDVDRLAIQPMpVHDIAIQLAKAEEK--DEPLPVAIALGVSPLV 212
WP_016389838 151 EYDGGFYIGKANVVSRDPRDpenfGKQNVGIYRIQVQAPGEFTLLSVpAHDMGRHIVAAEQE--NVPLKISVMLGNHPAM 228
WP_068805419 147 DFDGGYYIGKANVVSRDPNDpdnfGKQNVGIYRIQPHGPDEFTLMSVpIHDMGRHMQAAEET--GKPLKIAVMLGNHPAM 224
WP_111741903 134 DGDGGFYLDKACVVSRDPLDpdhfGKQNVGIYRMEVKGKRKLGLQPVpMHDIALHLHKAEER--GEDLPVAITLGNDPII 211
5M1B_A       228 ILGAVTPVPDTLSEYAFAGLLR-GTKTEVVKCISND-LEVPASAEIVLEGYIEQGETAPEGPYGDHTGYYNEVDSFPVFT 305
NP_388246    211 TTAASTPLLYDQSEYEMAGAIQ-GEPYRIVKSKLSD-LDVPWGAEVVLEGEIIAGEREYEGPFGEFTGHYSGGRSMPIIK 288
YP_429258    209 TFVASTPMAYEESEYEMAGALR-GEPFEVIKAETSN-LDVPAGAELILEGEILPRRRSPEGPFGEFPGSYSGVRMQAEVK 286
WP_009943033 212 SVVAGTPLAYDQSEYEMAGALR-GAPAPIATAPLTG-IDVPWGCEVLLEGVVEGREREIEGPFGEFTGHYSGGRSMPVVR 289
WP_013252321 217 TFMASTPIGYDQNEYEFVGALNgGVPCDIVKSDLYDhLYVPAGSEVILEGYIDPRVRTCEGPFGEFPGSYSGCRAQCEGV 296
WP_013255927 212 STMAATPLAYDQSEYKTASVIT-GTPFEVTPAIGYR-LNIPAWAEYVLEGEVIPRKRFCEGPFGEFPGSYSGVRDQIRIK 289
WP_007953305 213 TFMASTPVAYDQNEYEFVGALQdGVPCEIVKADTCDhLYVPAHAEVIIEGYIIPRKRFVEGAFGEFPGSYSGCRKQCEIQ 292
WP_016389838 229 CMFAATPVGYEESEFAYASQMM-GSPLRLTKSG-NG-MDILADSEMVIEAELMNGVRSFEGPFGEFPGSYSGVRKIPRFK 305
WP_068805419 225 AMFAATPIGYDESEYSYASAMM-GSPIELTESG-NG-LDIQAHAEIVIEAEYIHGRREFEGPFGEFPGSYSGVRRAPTFK 301
WP_111741903 212 TLMGATPLKYDQSEYEMAGALR-GSSYPIATAPLTG-FDVPWGSEVILEGVIEGRKREIEGPFGEFTGHYSGGRNMTVVR 289
5M1B_A       306 VTHITQREDAIYHSTYTGRp-pDEPAVLGVALNEVFVPILQKQ-FP-EIVDFYLPPEGCsyRLAVVTIKKQYAGHAKRVM 382
NP_388246    289 IKRVYHRNNPIFEHLYLGMpwtECDYMIGINTCVPLYQQLKEA-YPnEIVAVNAMYTHG--LIAIVSTKTRYGGFAKAVG 365
YP_429258    287 IHTVTHRVDPIFENLYLGVpwtEIDYLQALNTSIPLYKQIKAS-MP-EVVAVNAMYTHG--IGVIISTNCRFGGYGKAVA 362
WP_009943033 290 VDRISYRTDPVFESLYLGMpwtEVDHLIGPATCVPLHQQLKAE-FP-EVRAVNAMYTHG--LLAIVSTAKRYGGFAKAVG 365
WP_013252321 297 ITHVTYRTSPIFENIYLGMpwtEIDYLMALNTSVPIYKQLHGEgFP-EVVAVNAMYTHG--FTEIVSIKPRYGGHAMGAA 373
WP_013255927 290 IRRVTHRKNPIFENLFIGRpwtEHDTLIGLWTSVPLYKQLQSE-FP-EVRSVNAIYQHG--LSIIISTDLRFAGFAKTVA 365
WP_007953305 293 ITRITHRTKPIFENLYIGMpwtETDYLVGLNTSIPLYKQIKAT-MP-EVVAVNAMYTHG--IGVIISTKVRYGGYGKGVA 368
WP_016389838 306 VTAISHRNDPIFENIYIGRgwtEHDTLIGLNTSAPIYAQLKKD-FP-EVVAVNALYQHG--LTGVISVKNRFAGFAKSVA 381
WP_068805419 302 VTAVSHRKNPIFENIYIGRgwtEHDTLIGLNTSAPIYAQLKKE-FP-EVVAVNALYQHG--LTGIIAVKNRFAGFAKSVA 377
WP_111741903 290 IDKVSYRTKPIFESLYLGMpwtEIDYLMGPATCVPLYQQLKAE-FP-EVQAVNAMYTHG--LLAIISTKKRYGGFARAVG 365
5M1B_A       383 MGVWSfLRQf-mYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVeNTPIDYLDFASPvsGLGSKMGLDATNKWPG 461
NP_388246    366 MRALT-TPHglgYCKMVIVVDEDVDPFNLPQVMWALSTKMHPKHDAVIIpDLSVLPLDPGSNpsGITHKMILDATTPVAP 444
YP_429258    363 MRLLS-TPHgmpYSKIIIVVDDFVDPFNLEQVMWALTTKVRPDKDVILIhNAPGMPLDPSSDppGMHTKLIIDATTPVPP 441
WP_009943033 366 LRTMT-TPHglgYCKLVIVVDEDVDPFDLPQVMWALSTKVNPAGDLVNLpGMSVLELDPGSQppGMSNKLVIDATTPVSP 444
WP_013252321 374 FKLLS-TPHampYCHNVILVDGYVDPFDLNQVMWALSTRVRPDKDVKVIqNCAGMPLNPSEEtpGMTAKLIIDATIPVDP 452
WP_013255927 366 MRLAT-TPHgisYAKNIIVVDGDIDPFNLTQVMWALSARVRADKDVTIIaNTPGMPLDPCSNppGVGQKLIIDATTPKYP 444
WP_007953305 369 FRLLS-TPHgmpYSKIVIIVDEYVDPFNLEQVMWALTTRVKPSKDVVIIpNCSGMVLDPSSNpaGMHDKLIIDATTPVAP 447
WP_016389838 382 MRALG-TPHgtmYLKNLIMVDDDVDPFDLNEVMWALSTRTRAD-DTIVIpNMPLIPIDPAAEvaGKGHRLIIDATSFMPP 459
WP_068805419 378 LRALS-TPHglmYLKNLIMVDADVDPFDLNQVMWALSVRTRAS-DIMVLnDMAMIMIDPAAVtpGKGHHLIIDATTHMPP 455
WP_111741903 366 LRAMT-TPHglgYVKIVIMVDEDVDPFNLPQVMWAISAKVNPAGDLVQLpNMSVLELDPGSSpaGITDKLIIDATTPVAP 444
5M1B_A       462 ETq-rEWGRPIkKD--PDvv---aHIDAIWD 486
NP_388246    445 ETrg-hYSQPLdSP--LTtkeweqKLMDLMN 472
YP_429258    442 DVvsrE-VELVdTP--AKtalwekILKELHR 469
WP_009943033 445 DArg-hYSQPVaDL--PEaaawvgKLQELMS 472
WP_013252321 453 EPlprT-VELLkDP--AKseeyatIIADLMS 480
WP_013255927 445 DTl-rDV-TMIeDP--PCtekiekKLAALWE 471
WP_007953305 448 EPnprS-CEMLvPS--PAtpkweeILRQLQH 475
WP_016389838 460 DKlgsD-SKIVtPPsgANidelakVIQSLQN 489
WP_068805419 456 DPiggD-VEIVtPPsgPAidalaaRIRALQG 485
WP_111741903 445 DNrg-hYSQPVrDL--PEtkgwieKLNALLA 472
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