Conserved Protein Domain Family
COG2100

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COG2100: COG2100 (this model, PSSM-Id:225011 is obsolete and has been replaced by 441703)
Uncharacterized Fe-S cluster-containing enzyme, radical SAM superfamily [General function prediction only]
Statistics
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PSSM-Id: 225011
Aligned: 7 rows
Threshold Bit Score: 398.381
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2495799    1 MVCLDLSQYR--MITD--VKNKDNTLILEiNKIYEIEVEIPYEEVEIDGSIIKInAHPKRAENIKVGILNLISYSIANNL 76  Methanocaldococcus ...
11499398     --------------------------------------------------------------------------------     Archaeoglobus fulgidus
14601688   1 ----------------------------------------------------------------MYSVSLMHGNPKTAIR 16  Aeropyrum pernix
20094425   2 KVERHSGYLR--FRLYglIEFEVDPEEFR-RMVTAVISKRERRTVPVTLQGTRV-AAPVPREVLVGVLTDLISRLAGESG 77  Methanopyrus kandle...
14520767   3 KLRLPNSYFEghEDTItlVWRRTLVADFSkREIERAIRRKFRVSVEVNVEDGYL-VINTDNEDIERFIAFYIQNNLGGLL 81  Pyrococcus abyssi
18312049     --------------------------------------------------------------------------------     Pyrobaculum aerophilum
14591390   3 KLRLPNSHFEdhGDMIrlVWRRTLIADFKkRDIELAIKRKFRVSPSVRVEDGYL-LITTDNEDIERFVAFYIQSNLGGLL 81  Pyrococcus horikoshii
2495799   77 KSKITKRKTIYINEP--IPLIGHTAFGLIERGRNIIQVRGHCGCNLNCIFCSVDEGEFSKTRKNDYYVDLEYLIENYKKI 154 Methanocaldococcus ...
11499398   1 ------------------------------------------------------------------------MLEELGKV 8   Archaeoglobus fulgidus
14601688  17 PAGWHYGRRVYWIEG--LPLIGHIAFGVIDRGTNVLQVRPSTLCFHNCIFCSVDAGPSSRRRRSEYTVEWEQLVVWVEKV 94  Aeropyrum pernix
20094425  78 KNAYTGRRVYYITETtgIPLIGHTAFGLIDRGTNVIQVRPLSGCNLCCIYCSVDEGPISRTRSRDFMVDPDYLMEWFDRV 157 Methanopyrus kandle...
14520767  82 KNRYTKRKVIYIHEGmgVPLLGYNAFGLIDRGTNLIQVRGSTGCNMRCIFCSVDEGPYSRTRKLDFVVDIDYLLKWFDWV 161 Pyrococcus abyssi
18312049   1 ----MRGRLVYNIGGe-IPQVGTLAFGIVDRGTNVIEVRPTSICALNCIFCSVNAGPLSRVRWAEYVVEPEPLLSALEEV 75  Pyrobaculum aerophilum
14591390  82 RNKYTKRRVIYIHEGmeVPLLGYNAFGLIDRGTNLIQVRGSTGCNMSCIFCSVDEGPYSRTRKLDFVVDIDYLMKWFNLV 161 Pyrococcus horikoshii
2495799  155 VDFKeNKFIEAHLDGQGEPSLYYPLVDLVQELAEInkKGNGIVSMQTNGTVLNYKLIDELEEAGLHRINLSINALDEKMA 234 Methanocaldococcus ...
11499398   9 VEFK-GKGVELHLDGQGEPFLYPYMEYFLEKASRM--KGVEVVSIQSNGTLLTEEKISAIEDY-VTRINLSLSSLDEKTA 84  Archaeoglobus fulgidus
14601688  95 ARVK-GGGLEALIDGVGEPLTHPHITRIIKALKGL--DAIERVALETHGGSLSKSLARALEKAGLDRINLSVDAADPRLA 171 Aeropyrum pernix
20094425 158 AEFK-GQGLEAHLDGQGEPTLYPFLPDVVQALKEH--PHVDIVSIQTNAVPLSEDLVDELVEAGIDRFNVSVNSLDPKKA 234 Methanopyrus kandle...
14520767 162 AKEK-GKGLEAHLDAQGEPLLYPFIVELVQALREH--PHVSVISMQSNGVLLNDKLVEELAEAGLDRVNLSIHSLDPEKA 238 Pyrococcus abyssi
18312049  76 VRYKkTDDVEVHIDGMGDPGHYPHLAQLVRGAKSI--KGVALVSMQTRLYMLDKEAVQQLANAGLDRFNVSVDALDPALA 153 Pyrobaculum aerophilum
14591390 162 AKEK-GKGLEAHLDAQGEPLMYPFIVELVQALRDH--PHVSVISMQSNGVLLDDKLVEELAEAGLDRVNLSIHSLDPKKA 238 Pyrococcus horikoshii
2495799  235 KMLSGRRDYNIKKILDIAEYIKN-SKIHLLIAPLLLPNINDEEFKRVIEYAVDLEqknpqniinplTGKKDPILG---CQ 310 Methanocaldococcus ...
11499398  85 KTLHG--AYSVKKVKEVAEMIAS-SKMDLLIAPVWVPGYNDREIPKIIEFALEIG-----------AGKKYPPLG---IQ 147 Archaeoglobus fulgidus
14601688 172 RSLVGVDWYGVDRVLKTAEWIIAnTSIDVVLTPVVLPGVNEKEMATLVHWARRVG-----------AGRKSGWPTgvlIQ 240 Aeropyrum pernix
20094425 235 RAMAGRKDYDVEHVKRVVEYIAQeTEADVLVAPLWLPGYNDDDIVEIIGWAAKIG-----------AGKRWPPLG---IQ 300 Methanopyrus kandle...
14520767 239 KMLMGIKDYDLNHVLEMAEALVN-AGIDVLIAPVIMFGVNDDEAEAFIEFARRIG-----------AGKRWPALG---FQ 303 Pyrococcus abyssi
18312049 154 KKLAGAEWYDVEKALELIKIALE-AGINVIISPVWVPGLNDGEMPKIVKWAAENG-----------VGRGQTPVL---IQ 218 Pyrobaculum aerophilum
14591390 239 KMLMGIKDYDLSHVLEMAEALVN-AGIDVLIAPVIIFGINDDEAEAFIEFARKIG-----------AGKRWPALG---FQ 303 Pyrococcus horikoshii
2495799  311 LCRVYQLGRRP-KKMKVWDFEKFYYLLGKYELEYKKKGievkLITSPKDFGTHKRKRLPYPFKVGEVTKVKVVLDGRVKG 389 Methanocaldococcus ...
11499398 148 KYIPYRYGRKA---GKSMPFKEFYRRLEEYEKEYGVK-----LVLGPEDFGMEKRPKLSCPFRRGERVRARVVCEGRLKG 219 Archaeoglobus fulgidus
14601688 241 KFEIHKYGRKPsTVKSVWGWRRFYTWLARLEKETGYR-----LLVDPGEIGFKPRPRVEKPFERGDRVTLVLVGPGWHKG 315 Aeropyrum pernix
20094425 301 NYLEYRFGRRPkFLRRVIPMKEFYRWLRELESRTEVRP----LVLKPEHFGTEPRKSLPKPFRRGDVIRAEIVLEGRLRG 376 Methanopyrus kandle...
14520767 304 NYIPYKFGRNP-VIAKPVPFKEFYRWLRELEEKTGMKP----LILKPHHFGMYPRPFIPLAFKRGEVVKAEVILPGRIEG 378 Pyrococcus abyssi
18312049 219 KYIPHKRGRKV--EVRPMTWGEFWRKLREMEKELGIP-----LIPKKGEYNIHKAPELPKPYAVGDTITVEIVARGIFKG 291 Pyrobaculum aerophilum
14591390 304 NYVPYKFGRNP-VIAKPISFKEFYEWLRKLEEKTGMKP----LVLKPHHFGMHPRPFIPLAFKRGEVVKAEVVLPGRIEG 378 Pyrococcus horikoshii
2495799  390 EVLGVAK--------DRVIQIINCNNE-QNLIGKTVKVRILRNKDNIIVAELV 433 Methanocaldococcus jannaschii
11499398 220 EKVCVAR--------GRSIAVNTDK-----RVGEFVEFEVVSTKDGIIIGVER 259 Archaeoglobus fulgidus
14601688 316 ELLAVDRg------wRRVVALYGLTEGeALTPGAEVEARIVRDKDNIFIAVPY 362 Aeropyrum pernix
20094425 377 EMIARAA--------DRVIAIPDSAK--ILNVGDRVRVKVTRDKHNIFVGILV 419 Methanopyrus kandleri AV19
14520767 379 EMIAKAR--------NRLIQVINSN----AKVGDRIKVKIVRTRHGIYVGTPV 419 Pyrococcus abyssi
18312049 292 EMLGVAVnkrgsaiwDRVVTVAYGDAAsDELVGKRARVRVIENAHNIYIARPL 344 Pyrobaculum aerophilum
14591390 379 EMIAKAR--------NRLIQVINSN----AKVGDKIKVRIVRTRHGIYIGTPH 419 Pyrococcus horikoshii
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