6JLD,6JL9


Conserved Protein Domain Family
Ependymin

?
pfam00811: Ependymin (this model, PSSM-Id:395653 is obsolete and has been replaced by 459946)
Click on image for an interactive view with Cn3D
Ependymin
Statistics
?
PSSM-Id: 395653
Aligned: 45 rows
Threshold Bit Score: 94.6051
Created: 22-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
6JLD_D        63 KRLFEYILLYKD--GVMFQIDQATKQCSKMTLTQPWDPLDIPQNSTFEDQYSIGGp----QEQITVQEWSDRKSARSYe- 135 human
XP_001743010  80 TDRVEVLELYKS--QKAYVTNLTTGKCTSYNINFPFRHHDINPNARFVGYETLGNs----EDSITLSQWVAVNQTYHGep 153 Monosiga brevic...
XP_002125665  66 RPQRDELILHRE--KKRYVVDLHTRKCNVSTVDFHFHPISVDEPARFLGYSIVGTld-epEMGMMVGSWHHRSEGNDIr- 141 vase tunicate
8_pfamImport   3 RPQIDELVLHRE--KKRYTVDLKTRKCNVTTIDYPFHRIEVDEPARFLGYTVIGLiggapGEGMDLGIWEHHVEGQTVr- 79 
7_pfamImport   4 KTHYDTLFAYKE--KAEYRINTSTNKCTKLALNEKFIPIGVYPNSTYVGNFILGTlg-apGAGVIVQEWSHKVTTG---- 76 
XP_002596850  48 REYYDVLFIHNTepGTEYRLNLKTKECQKRDIVDAWRPFQVPPNSTFLGESYIGTgs-iqGAGVQTQLWENVFENED--- 123 Florida lancelet
XP_002596851  69 KEFYDVLYIHNTepGTEYRLNLKTKECQKREMSNAWRPFQVPPNSTFLGESYIGTga-vpGAGVLTELWSNTFEDGD--- 144 Florida lancelet
EKC33793     234 VDYYDVLYLHNV--GKEYRLNLKTRQCNVTALTRPFRPFGVPPMANFTGEATIGAag-iaGENVVIENFNGQFTDGT--- 307 Pacific oyster
EKC23413     123 KEIYDILILHRE--NKMYIVDFKTKKCNITAISRPFRPRGVIPGSKFDGEVVIGAaa-ipNEHVNVLAFSGNFTGE---- 195 Pacific oyster
EEN52865      68 RDFFDVLYLHQV--GKEYRYNLKTKECEVKQLAEQFRPFEVPANATNFGESYIGTsa-fpADGVLITLWGGEFRGG---- 140 Florida lancelet
6JLD_D       136 --TWIGIYTVKDCYPVQETFTINYSv-----ILSTRFFDIQLGIKDPSVFTPPSTC 184 human
XP_001743010 154 gaHVYQTFTQ-ECVPVRDDVMVPDSg-----FHYEEFTDVTLGVQDPNIWIPPADC 203 Monosiga brevicollis MX1
XP_002125665 142 -gNLTQSFTRDECIPVSEVFYGETVkdhqmlHFHRTYFDVTLGLDSANVFDIPKEC 196 vase tunicate
8_pfamImport  80 -gNLTQSFTRDECIPISEVFYGETIktkemiHFHRTYLDVTLGLDSADVFEIPKEC 134
7_pfamImport  77 --VWYQMFTDHGCIPVHSMFYGKDSagm-dvhYHHEYMDVSLGVREPEIFDIPKQC 129
XP_002596850 124 --KYFGVYTAVGCIPIQEEFYSRRTg-----LVTTTFFDVTGGISDPNVFIPPREC 172 Florida lancelet
XP_002596851 145 --KYFGVYTVEGCIPIQEEFYSNRTg-----LVSTFFFDVTAGISDPNVFIPPREC 193 Florida lancelet
EKC33793     308 --KFFGDVTYPDCIPVSNGFFNNDIg-----FAMNTFFDINIGITDPMVFIPPREC 356 Pacific oyster
EKC23413     196 --AYTGLVSSPDCFPIQNIHFSQKYg-----FEQSTYYDLKVGISDPELFIPPREC 244 Pacific oyster
EEN52865     141 --RYMATFTNSGCVPVEDGFCTERIg-----CVHTSFYDVVAGISDPDVFIPPKAC 189 Florida lancelet
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap