Conserved Protein Domain Family
IFT43

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pfam15305: IFT43 (this model, PSSM-Id:405893 is obsolete and has been replaced by 464631)
Intraflagellar transport protein 43
Intraflagellar transport protein 43 (IFT43) is a subunit of the IFT complex A (IFT-A) machinery of primary cilia.
Statistics
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PSSM-Id: 405893
Aligned: 17 rows
Threshold Bit Score: 80.1248
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EGF83776     192 RETASrrdRRGSRSGVPVANNDIDDEkeKVRKTTVAGPmtayaassrkmDDGDq-VMVIIPDLMDV--EDEDMSATVAVA 268 Batrachochytriu...
EGD73159      12 WGDES---KGKTTRRNRGESAPEEDE--RLKMTVPVEE-----------DSDD--DIPEIPELQDQveEEEDITTKVAEA 73  Salpingoeca ros...
XP_003062227 130 WSEDA---RGGGDDANANASANANARarRAAAATTY-------------DDDEv---------SSS--EDEGRDGRLSYA 182 Micromonas pusi...
XP_001696653 112 ilgEDskkFVGVSRRKQEQLARGDDE--VSRKNLKYET-----------LTAGvdGIMEIPELEEE--GREDLSNIVAEA 176 Chlamydomonas r...
XP_002901440  72 gSSTSetkRGGRRRKGSEAPASGGER--RNQKNRYFEE-----------DDETt-DIMEIPDLEEEe-REQDITTMVAEA 136 Phytophthora in...
CBN74139      78 ASSEAqkkSGGQKTTTQQKPIEGGSN--RANRRNHF-------------DNEEt-EILVIPDLEDE--GEEDVETKVAAA 139 Ectocarpus sili...
XP_011406124  15 WTYEApkhKSKKNAPDNDLTFEIEDE--RLKQ-----------------DNEIedFIDNIPDLDEM--NEGDLVSQVAAP 73  Amphimedon quee...
EEN69224      91 WADDTgkeKKSA----------------RLRSDSPPRR-----------DDSDe-DIPVIPDLDDV--QEEDMATQIAAP 140 Florida lancelet
Q28CW2        55 WADDSs-gPSKS---TKRMTEDVEDS--RLKQQSLDES-----------DEGE--DIPVIPDLEDV--QEEDLALQVASP 113 tropical clawed...
E2QSX5        62 WADDSm-kTSKS---GRRASEEVEEGshRLRQQSFGGS-----------DDGG--DIPVIPDLEDV--QEEDFALQVAAP 122 dog
EGF83776     269 PTIKTk----AMKTISEIESDISQSDAvvnqL-----QHLSvPGIDMSILIRaALCPPSQLDELDQPWDWDLLFTQVSSE 339 Batrachochytriu...
EGD73159      74 PTANI-----QMATMADLDKELSSTLS----F-----TQTD-SGVDLKLLIN-NLTPSHLLKEEDKEWDFVHVFTEIKSE 137 Salpingoeca ros...
XP_003062227 183 PRYNPnrargRVQTKEELDAAAPKRAHdlgrRgvdggVTFEdDGIDLSVLTSrLLTREECEEDFNEVWTADSLWEELMPV 262 Micromonas pusi...
XP_001696653 177 PKVRTn----KVQGMEELEEDMHYK------L-----PAMDdRDIDLSLLTA-VLCSSEQVAEAEDPWDPDIVLTEVASA 240 Chlamydomonas r...
XP_002901440 137 PRNTTr----AVQSLKQLDKEIKFA------L-----PSAQtHGVDLHLLTS-GLCPERAVSEDDEPWDFDTLLNDIAQE 200 Phytophthora in...
CBN74139     140 PQNTTr----RVPSLRELDEDLKYA------------IPSGaDGLDMSLLTK-TLVPSEMLEEDDSPWEFDSLLQSVTQE 202 Ectocarpus sili...
XP_011406124  74 PSAAVq----QITTYKQLDNDLAKHAS----L-----FTMD-GEIDLKALAQ-VISPESEIQEDDKVWEWDKLFAEVSHE 138 Amphimedon quee...
EEN69224     141 PSLQVn----KIATYRELDTDLFKQAA----F-----LILD-DEIDLKPLAK-CLSAETDVLEEDKPWDWDRLFTEVTSE 205 Florida lancelet
Q28CW2       114 PSVQVn----RVLTYKDLDNDLMRHAA----F-----QTLD-GDIDLKLLTK-VLSPEPEVREENVQWDWDLLFTEVSSE 178 tropical clawed...
E2QSX5       123 PSIQVn----RVMTYRDLDNDLMKYAA----F-----QTLD-GEIDLKLLTK-VLAPEHEVREDDVNWDWDRLYTEVSSE 187 dog
EGF83776     340 IHAEKEK 346 Batrachochytrium dendrobatidis JAM81
EGD73159     138 LAAEEEK 144 Salpingoeca rosetta
XP_003062227 263 LQKHEDE 269 Micromonas pusilla CCMP1545
XP_001696653 241 INAEREK 247 Chlamydomonas reinhardtii
XP_002901440 201 IQKDLDD 207 Phytophthora infestans T30-4
CBN74139     203 FNAEKRl 209 Ectocarpus siliculosus
XP_011406124 139 IESTWRQ 145 Amphimedon queenslandica
EEN69224     206 LQVEWEA 212 Florida lancelet
Q28CW2       179 LITEWDv 185 tropical clawed frog
E2QSX5       188 LLSEWDl 194 dog
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