Conserved Protein Domain Family
YcbK

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COG3108: YcbK (this model, PSSM-Id:225650 is obsolete and has been replaced by 442342)
Uncharacterized conserved protein YcbK, DUF882 family [Function unknown]
Statistics
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PSSM-Id: 225650
Aligned: 19 rows
Threshold Bit Score: 167.547
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15965473 248 APKRREKPRADSIRavpageKKTITANNAGQPQVASLAYTSLPGVNMNPLFSMEHEAHEADEDDAPLEVANLSGLARLTP 327 Sinorhizobium meliloti
15889104 199 FFAGAAKKRLPKMIes--gtAGNTEVAALSGAADGSMGIALSGRSMMSEEFDDAHLDEEDDQPNGLMKLASLSGLTRVSP 276 Agrobacterium tumef...
2495584    1 MDKFDANRRKLLAL------GGVALGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFR 74  Escherichia coli
2495584    1 MDKFDANRRKLLAL------GGVALGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFR 74  Escherichia coli
1176066    1 MNYVDQNKRKWLSL------GGIALGISILPNSVLAMVSTPKPRILTFRNINTGERLSGEFSLAKGFSPAMLKKLDYLMR 74  Haemophilus influenzae
15602136   1 MNSINHTRRKWLSL------GGIVLGASLLPSPLLAAVSTPKPRILRFRNINTGEKFSAEFLPSKGFSSVALKKLDYLMR 74  Pasteurella multocida
16764356   1 MDKFDANRRKLLAL------GGVALGAAILPAPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLNHFFR 74  Salmonella typhimur...
15641282   1 ---MQTTRRDFLKLt----aGGLIL-AACTPSIAFASYAA-KPRELALSNLHTGESIETRYFNGKNYVRSELKRLNHLCR 71  Vibrio cholerae
16121688   1 MDKIDNNRRKWLTL------GGVALGMSLLPGPVFATLSTPRPRILTLNNLNTGESIKAEFFDGRNYNKDELSRLNHIFR 74  Yersinia pestis
15800787   1 MDKFDANRRKLLAL------GGVAXGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFR 74  Escherichia coli O1...
15965473 328 SglILQTEKVETGCFKPELLDILKTVEGHYgRKVMVTSGLRAIKVNR---------KRQSLHTRCEAADIQVAGVSKWEL 398 Sinorhizobium meliloti
15889104 277 NglFLQTDHVEVGCFKPELVRMIKDVERHYnSPAIVTSGYRPPKGIR----------QGSKHYTCDAADIQIKGVSKWEL 346 Agrobacterium tumef...
2495584   75 D--YRANKIKSIDPGLFDQLYRLQGLLGTR-KPVQLISGYRSIDTNNelrarsrgvAKKSYHTKGQAMDFHIEGIALSNI 151 Escherichia coli
2495584   75 D--YRANKIKSIDPGLFDQLYRLQGLLGTR-KPVQLISGYRSIDTNNelrarsrgvAKKSYHTKGQAMDFHIEGIALSNI 151 Escherichia coli
1176066   75 D--KRTNQVHKMDPNLFQKFYNIQTNLGLRnAEIEVICGYRSASTNAmrrrqsra------------------------- 127 Haemophilus influenzae
15602136  75 D--KRNNHMHRMDPKLFLKFYRLQASLGLRnTEIQIICGYRSPVSNAamhrrsrgvASNSYHTRGQAIDFRIDGVPLAKL 152 Pasteurella multocida
16764356  75 D--YRANKVRSIDPRLFDQLYRLQGLLGTR-KPVQLISGYRSLDTNNelrarssgvAKKSYHTKGQAMDFHIEGVALSNI 151 Salmonella typhimur...
15641282  72 D--FRRDEVHAMDKLLFDQLCQIQLLLGTQ-AEVHIVSGYRSPATNKqlrskskgvAKKSYHMSGQAIDFRLDGVSLKKI 148 Vibrio cholerae
16121688  75 D--YRANKVKKIDPRLFDQLYRLQVLLETT-KPVQLISGYRSLGTNNelrehsrgvAKQSYHTKGQAMDFHIEGIQLSYI 151 Yersinia pestis
15800787  75 D--YRANKIKSIDPGLFDQLYRLQGLLGTR-KPVQLISGYRSIDTNNelrarsrgvAKKSYHTKGQAMDFHIEGIALSNI 151 Escherichia coli O1...
15965473 399 ANFLRNVPGrGGVGTYCHTNSVHIDIGPQRDWNWR 433 Sinorhizobium meliloti
15889104 347 ATYLRSLPDrGGVGTYCHTESVHMDTGEARDWNWR 381 Agrobacterium tumefaciens str. C58 (Cereon)
2495584  152 RKAALSMRA-GGVGYYPRSNfVHIDTGPARHW--- 182 Escherichia coli
2495584  152 RKAALSMRA-GGVGYYPRSNfVHIDTGPARHW--- 182 Escherichia coli
1176066      -----------------------------------     Haemophilus influenzae
15602136 153 RQAAEKLNN-GGVGYYPRSNfIHVDTGPVRTWRGS 186 Pasteurella multocida
16764356 152 RKAALSMRA-GGVGYYPRSNfVHIDTGPARHW--- 182 Salmonella typhimurium LT2
15641282 149 REAAISLQA-GGVGYYPKSQfIHIDTGPVRQWVGA 182 Vibrio cholerae
16121688 152 RKAALKMRA-GGVGYYPRSNfVHIDTGPTRAW--- 182 Yersinia pestis
15800787 152 RKAALSMRA-GGVGYYPRSNfVHIDTGPARHW--- 182 Escherichia coli O157:H7 EDL933
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